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Search term: YLL002W


Gene summary:

Species Saccharomyces cerevisiae (Sce)
Primary name RTT109
SGD link S000003925
Alternative ID YLL002W
Description Histone acetyltransferase critical for cell survival in the presence of DNA damage during S phase; acetylates H3-K56 and H3-K9; involved in non-homologous end joining and in regulation of Ty1 transposition; interacts physically with Vps75p
Synonyms YLL002W
Datasets
KOGs
Inparanoid
HomoloGene
OrthoMCL
Curated

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KOG results:

KOG name Phylogenetic pattern
(and link to KOGs with this pattern)
KOG4534 ----YPE

KOGs classification KOGs description
POORLY CHARACTERIZED Uncharacterized conserved protein

Species KOG link NCBI link UniProt link
Saccharomyces cerevisiae (Sce) YLL002w
(S000003925)
GI:6323027 Q07794
Schizosaccharomyces pombe (Spo) SPBC342.06c GI:19113541 Q9Y7Y5
Encephalitozoon cuniculi (Ecu) ECU01g0860 GI:19075096


GO terms for KOG results:

GO ID GO term GO aspect Evidence codes and associations
GO:0005634 nucleus C
IDA
SceS000003925
SpoSPBC342.06c
ISS
SpoSPBC342.06c
GO:0010484 H3 histone acetyltransferase activity F
IDA
SceS000003925
IGI
SceS000003925
IMP
SceS000003925
GO:0032931 histone acetyltransferase activity (H3-K56
specific)
F
IDA
SpoSPBC342.06c
GO:0006303 double-strand break repair via nonhomologous end
joining
P
IMP
SceS000003925
GO:0006974 response to DNA damage stimulus P
IGI
SpoSPBC342.06c
IMP
SceS000003925
SpoSPBC342.06c
GO:0010526 negative regulation of transposition,
RNA-mediated
P
IMP
SceS000003925
GO:0016573 histone acetylation P
IDA
SceS000003925
IGI
SceS000003925
IMP
SceS000003925
SpoSPBC342.06c
GO:0030702 chromatin silencing at centromere P
IGI
SpoSPBC342.06c
IMP
SpoSPBC342.06c
GO:0043618 regulation of transcription from RNA polymerase II
promoter in response to stress
P
IMP
SceS000003925

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HomoloGene results:

HomoloGene cluster Phylogenetic pattern
39641

Species Gene ID NCBI link UniProt link
Saccharomyces cerevisiae (Sce) RTT109
(S000003925)
GI:6323027 Q07794
Kluyveromyces lactis (Kla) KLLA0F12914g GI:50311273
Eremothecium gossypii (Ego) AGOS_AAL173C GI:45184651


GO terms for Homologene results:

GO ID GO term GO aspect Evidence codes and associations
GO:0005634 nucleus C
IDA
SceS000003925
GO:0010484 H3 histone acetyltransferase activity F
IDA
SceS000003925
IGI
SceS000003925
IMP
SceS000003925
GO:0006303 double-strand break repair via nonhomologous end
joining
P
IMP
SceS000003925
GO:0006974 response to DNA damage stimulus P
IMP
SceS000003925
GO:0010526 negative regulation of transposition,
RNA-mediated
P
IMP
SceS000003925
GO:0016573 histone acetylation P
IDA
SceS000003925
IGI
SceS000003925
IMP
SceS000003925
GO:0043618 regulation of transcription from RNA polymerase II
promoter in response to stress
P
IMP
SceS000003925

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OrthoMCL results:

Selected databases only

OrthoMCL cluster Phylogenetic pattern
OG1_15298

Species OrthoMCL
sequence
Model organism
protein page
UniProt link
Ashbya gossypii (Ago) ago14 AAL173C
Candida glabrata (Cgl) cgl906 CAGL0D05786g
Debaryomyces hansenii (Dha) dha1997 DEHA0C12859g
Kluyveromyces lactis (Kla) kla4661 KLLA0F12914g
Neurospora crassa (Ncr) ncr9569 NCU09825.2
Saccharomyces cerevisiae (Sce) sce4009 YLL002W
(S000003925)
Schizosaccharomyces pombe (Spo) spo2867 SPBC342.06c Q9Y7Y5
Yarrowia lipolytica (Yli) yli6029 YALI0F16313g


GO terms for OrthoMCL results:

GO ID GO term GO aspect Evidence codes and associations
GO:0005634 nucleus C
IDA
SceS000003925
SpoSPBC342.06c
ISS
SpoSPBC342.06c
GO:0010484 H3 histone acetyltransferase activity F
IDA
SceS000003925
IGI
SceS000003925
IMP
SceS000003925
GO:0032931 histone acetyltransferase activity (H3-K56
specific)
F
IDA
SpoSPBC342.06c
GO:0006303 double-strand break repair via nonhomologous end
joining
P
IMP
SceS000003925
GO:0006974 response to DNA damage stimulus P
IGI
SpoSPBC342.06c
IMP
SceS000003925
SpoSPBC342.06c
GO:0010526 negative regulation of transposition,
RNA-mediated
P
IMP
SceS000003925
GO:0016573 histone acetylation P
IDA
SceS000003925
IGI
SceS000003925
IMP
SceS000003925
SpoSPBC342.06c
GO:0030702 chromatin silencing at centromere P
IGI
SpoSPBC342.06c
IMP
SpoSPBC342.06c
GO:0043618 regulation of transcription from RNA polymerase II
promoter in response to stress
P
IMP
SceS000003925

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Curated yeast ortholog results:

S. pombe
systematic ID
S. cerevisiae
systematic ID
SPBC342.06c
(Q9Y7Y5)
YLL002W
(S000003925)


GO terms for curated homolog results:

GO ID GO term GO aspect Evidence codes and associations
GO:0005634 nucleus C
IDA
SceS000003925
SpoSPBC342.06c
ISS
SpoSPBC342.06c
GO:0010484 H3 histone acetyltransferase activity F
IDA
SceS000003925
IGI
SceS000003925
IMP
SceS000003925
GO:0032931 histone acetyltransferase activity (H3-K56
specific)
F
IDA
SpoSPBC342.06c
GO:0006303 double-strand break repair via nonhomologous end
joining
P
IMP
SceS000003925
GO:0006974 response to DNA damage stimulus P
IGI
SpoSPBC342.06c
IMP
SceS000003925
SpoSPBC342.06c
GO:0010526 negative regulation of transposition,
RNA-mediated
P
IMP
SceS000003925
GO:0016573 histone acetylation P
IDA
SceS000003925
IGI
SceS000003925
IMP
SceS000003925
SpoSPBC342.06c
GO:0030702 chromatin silencing at centromere P
IGI
SpoSPBC342.06c
IMP
SpoSPBC342.06c
GO:0043618 regulation of transcription from RNA polymerase II
promoter in response to stress
P
IMP
SceS000003925

Back to the top
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GO info in one table:

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