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Search term: YLL013C

Gene summary:

Species Saccharomyces cerevisiae (Sce)
Primary name PUF3
SGD link S000003936
Alternative ID YLL013C
Description Protein of the mitochondrial outer surface, links the Arp2/3 complex with the mitochore during anterograde mitochondrial movement; also binds to and promotes degradation of mRNAs for select nuclear-encoded mitochondrial proteins
Synonyms YLL013C
Datasets
KOGs
Inparanoid
HomoloGene
OrthoMCL
Curated

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GO info in one table:

KOG results:

KOG name Phylogenetic pattern
(and link to KOGs with this pattern)
KOG1488 ACDHYPE

KOGs classification KOGs description
INFORMATION STORAGE AND PROCESSING Translational repressor Pumilio/PUF3 and related RNA-binding proteins (Puf superfamily)

Species KOG link NCBI link UniProt link
Arabidopsis thaliana (Ath) At2g29140 GI:15227038
Arabidopsis thaliana (Ath) At2g29190 GI:15227051
Arabidopsis thaliana (Ath) At2g29200 GI:15227052
Arabidopsis thaliana (Ath) At3g10360 GI:15228271
Arabidopsis thaliana (Ath) At3g20250 GI:15231084
Arabidopsis thaliana (Ath) At4g25880 GI:7484786
Caenorhabditis elegans (Cel) CE01838 GI:17535397
Caenorhabditis elegans (Cel) CE01916
(WBGene00001402)		 GI:17534639 Q09312
Caenorhabditis elegans (Cel) CE02258
(WBGene00004241)		 GI:17535393 Q20757
Caenorhabditis elegans (Cel) CE05044 GI:17569159
Caenorhabditis elegans (Cel) CE09451
(WBGene00004242)		 GI:17535395 O01322
Caenorhabditis elegans (Cel) CE16788
(WBGene00004243)		 GI:17541734 O44169
Caenorhabditis elegans (Cel) CE17188
(WBGene00004240)		 GI:17541732 Q8I723
Caenorhabditis elegans (Cel) CE18393
(WBGene00004239)		 GI:17541730 Q9U2G4
Caenorhabditis elegans (Cel) CE20960
(WBGene00001401)		 GI:17534699 Q9N5M6
Caenorhabditis elegans (Cel) CE25318
(WBGene00021665)		 GI:17510113 Q9N3P7
Caenorhabditis elegans (Cel) CE26114
(WBGene00021673)		 GI:17510129 Q965U7
Caenorhabditis elegans (Cel) CE27529_2 GI:17544088
Caenorhabditis elegans (Cel) CE27785 GI:17510107
Drosophila melanogaster (Dme) 7299139 GI:7299139
Homo sapiens (Hsa) Hs13491166 GI:13491166 Q14671
Homo sapiens (Hsa) Hs13491168
(PUM2)		 GI:13491168 Q8TB72
Saccharomyces cerevisiae (Sce) YLL013c
(S000003936)		 GI:6323016 Q07807
Schizosaccharomyces pombe (Spo) SPAC1687.22c GI:19114053 O94462
Schizosaccharomyces pombe (Spo) SPAC4G9.05 GI:19114599 Q10238
Schizosaccharomyces pombe (Spo) SPCC1682.08c GI:19075301 O74438
Encephalitozoon cuniculi (Ecu) ECU11g1730 GI:19074973 Q8SQJ0


GO terms for KOG results:

GO ID GO term GO aspect Evidence codes and associations
GO:0005575 cellular_component C
ND
AthAt2g29190
At2g29200
At3g10360
GO:0005737 cytoplasm C
IDA
CelWBGene00004241
SceS000003936
SpoSPAC4G9.05
SPCC1682.08c
ISS
CelWBGene00004242
SpoSPAC4G9.05
GO:0005773 vacuole C
IDA
AthAt3g20250
GO:0005829 cytosol C
IDA
SpoSPAC1687.22c
GO:0005886 plasma membrane C
IDA
AthAt2g29140
GO:0032473 external side of mitochondrial outer
membrane		 C
IDA
SceS000003936
GO:0043073 germ cell nucleus C
IDA
CelWBGene00001401
GO:0043186 P granule C
IDA
CelWBGene00004241
GO:0048471 perinuclear region of cytoplasm C
IDA
CelWBGene00001401
GO:0003723 RNA binding F
IDA
AthAt2g29190
ISS
AthAt2g29190
At3g10360
At2g29200
At4g25880
At2g29140
At3g20250
CelWBGene00004243
SpoSPCC1682.08c
GO:0003729 mRNA binding F
IDA
SceS000003936
IPI
AthAt2g29190
ISS
SpoSPAC4G9.05
SPAC1687.22c
GO:0003730 mRNA 3'-UTR binding F
IPI
CelWBGene00001402
WBGene00001401
ISS
CelWBGene00004242
GO:0005515 protein binding F
IPI
HsaPUM2
GO:0000003 reproduction P
IMP
CelWBGene00001402
WBGene00001401
GO:0000288 nuclear-transcribed mRNA catabolic process,
deadenylation-dependent decay		 P
IMP
SceS000003936
ISS
SpoSPAC1687.22c
GO:0000910 cytokinesis P
IMP
CelWBGene00004241
WBGene00004243
WBGene00004239
GO:0000956 nuclear-transcribed mRNA catabolic
process		 P
IDA
SceS000003936
GO:0002009 morphogenesis of an epithelium P
IMP
CelWBGene00001402
GO:0006402 mRNA catabolic process P
ISS
CelWBGene00004242
GO:0006898 receptor-mediated endocytosis P
IMP
CelWBGene00001402
WBGene00001401
GO:0007005 mitochondrion organization P
IMP
SceS000003936
GO:0007126 meiosis P
IEP
SpoSPAC4G9.05
SPCC1682.08c
GO:0007281 germ cell development P
IGI
CelWBGene00004243
IMP
CelWBGene00004242
GO:0007283 spermatogenesis P
IMP
CelWBGene00001402
WBGene00001401
GO:0008150 biological_process P
ND
AthAt3g10360
At2g29190
GO:0008285 negative regulation of cell proliferation P
IMP
CelWBGene00004242
GO:0008298 intracellular mRNA localization P
IMP
SceS000003936
GO:0009060 aerobic respiration P
IMP
SceS000003936
GO:0009792 embryo development ending in birth or egg
hatching		 P
IMP
CelWBGene00001402
WBGene00004239
WBGene00001401
GO:0009992 cellular water homeostasis P
IMP
CelWBGene00004239
GO:0017148 negative regulation of translation P
IGI
CelWBGene00001402
WBGene00001401
ISS
CelWBGene00004242
GO:0033554 cellular response to stress P
IEP
SpoSPAC1687.22c
GO:0034613 cellular protein localization P
RCA
SceS000003936
GO:0035046 pronuclear migration P
IMP
CelWBGene00004239
GO:0035188 hatching P
IMP
CelWBGene00004241
WBGene00004243
GO:0040011 locomotion P
IMP
CelWBGene00001402
WBGene00001401
GO:0040022 feminization of hermaphroditic
germ-line		 P
IMP
CelWBGene00001402
WBGene00001401
GO:0040027 negative regulation of vulval development P
IMP
CelWBGene00001402
WBGene00001401
GO:0040035 hermaphrodite genitalia development P
IMP
CelWBGene00001402
GO:0045132 meiotic chromosome segregation P
IMP
CelWBGene00001402
GO:0048477 oogenesis P
IMP
CelWBGene00004241
WBGene00004243
GO:0051301 cell division P
IMP
CelWBGene00004241
WBGene00004243
WBGene00004239
GO:0051646 mitochondrion localization P
IMP
SceS000003936
GO:0051729 germline cell cycle switching, mitotic to meiotic
cell cycle		 P
IMP
CelWBGene00001402
WBGene00001401

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HomoloGene results:

HomoloGene cluster Phylogenetic pattern
99769

Species Gene ID NCBI link UniProt link
Caenorhabditis elegans (Cel) puf-9
(CE31253;
WBGene00004245)		 GI:25150422
Saccharomyces cerevisiae (Sce) PUF3
(S000003936)		 GI:6323016 Q07807
Kluyveromyces lactis (Kla) KLLA0F15477g GI:50311501


GO terms for Homologene results:

GO ID GO term GO aspect Evidence codes and associations
GO:0005737 cytoplasm C
IDA
SceS000003936
ISS
CelWBGene00004245
GO:0032473 external side of mitochondrial outer
membrane		 C
IDA
SceS000003936
GO:0003729 mRNA binding F
IDA
SceS000003936
GO:0003730 mRNA 3'-UTR binding F
ISS
CelWBGene00004245
GO:0000288 nuclear-transcribed mRNA catabolic process,
deadenylation-dependent decay		 P
IMP
SceS000003936
GO:0000956 nuclear-transcribed mRNA catabolic
process		 P
IDA
SceS000003936
GO:0006402 mRNA catabolic process P
ISS
CelWBGene00004245
GO:0007005 mitochondrion organization P
IMP
SceS000003936
GO:0008298 intracellular mRNA localization P
IMP
SceS000003936
GO:0009060 aerobic respiration P
IMP
SceS000003936
GO:0017148 negative regulation of translation P
ISS
CelWBGene00004245
GO:0034613 cellular protein localization P
RCA
SceS000003936
GO:0040010 positive regulation of growth rate P
IMP
CelWBGene00004245
GO:0040011 locomotion P
IMP
CelWBGene00004245
GO:0040017 positive regulation of locomotion P
IMP
CelWBGene00004245
GO:0051646 mitochondrion localization P
IMP
SceS000003936

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