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Search term: YLR007W


Gene summary:

Species Saccharomyces cerevisiae (Sce)
Primary name NSE1
SGD link S000003997
Alternative ID YLR007W
Description Essential subunit of the Mms21-Smc5-Smc6 complex; nuclear protein required for DNA repair and growth; has a nonstructural role in the maintenance of chromosomes
Synonyms YLR007W
Datasets
KOGs
Inparanoid
HomoloGene
OrthoMCL
Curated

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KOG results:

KOG name Phylogenetic pattern
(and link to KOGs with this pattern)
KOG4718 --DHYP-

KOGs classification KOGs description
INFORMATION STORAGE AND PROCESSING Non-SMC (structural maintenance of chromosomes) element 1 protein (NSE1)

Species KOG link NCBI link UniProt link
Drosophila melanogaster (Dme) 7297155
(FBgn0031848)
GI:19920842
Homo sapiens (Hsa) Hs21489973 GI:17511961
Saccharomyces cerevisiae (Sce) YLR007w
(S000003997)
GI:6323035 Q07913
Schizosaccharomyces pombe (Spo) SPCC550.05 GI:19075597 Q53EK2


GO terms for KOG results:

GO ID GO term GO aspect Evidence codes and associations
GO:0005634 nucleus C
IC
SpoSPCC550.05
IDA
SceS000003997
SpoSPCC550.05
GO:0005829 cytosol C
IDA
SpoSPCC550.05
GO:0030915 Smc5-Smc6 complex C
IDA
SpoSPCC550.05
IPI
SceS000003997
GO:0003674 molecular_function F
ND
SceS000003997
GO:0004842 ubiquitin-protein ligase activity F
TAS
SpoSPCC550.05
GO:0005515 protein binding F
IPI
SpoSPCC550.05
GO:0000724 double-strand break repair via homologous
recombination
P
IGI
SpoSPCC550.05
GO:0006281 DNA repair P
IDA
SceS000003997
IMP
SceS000003997
SpoSPCC550.05
GO:0006301 postreplication repair P
IGI
SceS000003997
GO:0006311 meiotic gene conversion P
IMP
SpoSPCC550.05
GO:0007131 reciprocal meiotic recombination P
IGI
SpoSPCC550.05
IMP
SpoSPCC550.05
GO:0016567 protein ubiquitination P
TAS
SpoSPCC550.05
GO:0048478 replication fork protection P
IGI
SpoSPCC550.05

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HomoloGene results:

HomoloGene cluster Phylogenetic pattern
39646

Species Gene ID NCBI link UniProt link
Saccharomyces cerevisiae (Sce) NSE1
(S000003997)
GI:6323035 Q07913
Kluyveromyces lactis (Kla) KLLA0E09460g GI:50308747


GO terms for Homologene results:

GO ID GO term GO aspect Evidence codes and associations
GO:0005634 nucleus C
IDA
SceS000003997
GO:0030915 Smc5-Smc6 complex C
IPI
SceS000003997
GO:0003674 molecular_function F
ND
SceS000003997
GO:0006281 DNA repair P
IDA
SceS000003997
IMP
SceS000003997
GO:0006301 postreplication repair P
IGI
SceS000003997

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OrthoMCL results:

Selected databases only

OrthoMCL cluster Phylogenetic pattern
OG1_31653

Species OrthoMCL
sequence
Model organism
protein page
UniProt link
Ashbya gossypii (Ago) ago2085 ADR344W
Candida glabrata (Cgl) cgl3033 CAGL0J00913g
Kluyveromyces lactis (Kla) kla3377 KLLA0E09460g
Saccharomyces cerevisiae (Sce) sce4087 YLR007W
(S000003997)


GO terms for OrthoMCL results:

GO ID GO term GO aspect Evidence codes and associations
GO:0005634 nucleus C
IDA
SceS000003997
GO:0030915 Smc5-Smc6 complex C
IPI
SceS000003997
GO:0003674 molecular_function F
ND
SceS000003997
GO:0006281 DNA repair P
IDA
SceS000003997
IMP
SceS000003997
GO:0006301 postreplication repair P
IGI
SceS000003997

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Curated yeast ortholog results:

S. pombe
systematic ID
S. cerevisiae
systematic ID
SPCC550.05
(Q53EK2)
YLR007W
(S000003997)


GO terms for curated homolog results:

GO ID GO term GO aspect Evidence codes and associations
GO:0005634 nucleus C
IC
SpoSPCC550.05
IDA
SceS000003997
SpoSPCC550.05
GO:0005829 cytosol C
IDA
SpoSPCC550.05
GO:0030915 Smc5-Smc6 complex C
IDA
SpoSPCC550.05
IPI
SceS000003997
GO:0003674 molecular_function F
ND
SceS000003997
GO:0004842 ubiquitin-protein ligase activity F
TAS
SpoSPCC550.05
GO:0005515 protein binding F
IPI
SpoSPCC550.05
GO:0000724 double-strand break repair via homologous
recombination
P
IGI
SpoSPCC550.05
GO:0006281 DNA repair P
IDA
SceS000003997
IMP
SceS000003997
SpoSPCC550.05
GO:0006301 postreplication repair P
IGI
SceS000003997
GO:0006311 meiotic gene conversion P
IMP
SpoSPCC550.05
GO:0007131 reciprocal meiotic recombination P
IGI
SpoSPCC550.05
IMP
SpoSPCC550.05
GO:0016567 protein ubiquitination P
TAS
SpoSPCC550.05
GO:0048478 replication fork protection P
IGI
SpoSPCC550.05

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