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Search term: YLR009W

Gene summary:

Species Saccharomyces cerevisiae (Sce)
Primary name RLP24
SGD link S000003999
Alternative ID YLR009W
Description Essential protein with similarity to Rpl24Ap and Rpl24Bp, associated with pre-60S ribosomal subunits and required for ribosomal large subunit biogenesis
Synonyms YLR009W
Datasets
KOGs
Inparanoid
HomoloGene
OrthoMCL
Curated

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Search for GO info:  

GO info in one table:

KOG results:

KOG name Phylogenetic pattern
(and link to KOGs with this pattern)
KOG1723 ACDHYPE

KOGs classification KOGs description
INFORMATION STORAGE AND PROCESSING 60s ribosomal protein L30 isolog

Species KOG link NCBI link UniProt link
Arabidopsis thaliana (Ath) At2g44860 GI:15225363
Caenorhabditis elegans (Cel) CE05202
(WBGene00004437)		 GI:17505458 Q17606
Drosophila melanogaster (Dme) 7299448 GI:7299448
Homo sapiens (Hsa) Hs10047102
(RSL24D1)		 GI:10047102 Q9UHA3
Homo sapiens (Hsa) Hs17481834 GI:17481834
Homo sapiens (Hsa) Hs17482702_1 GI:17482702
Homo sapiens (Hsa) Hs18548980 GI:18548980
Homo sapiens (Hsa) Hs18566138 GI:18566138
Homo sapiens (Hsa) Hs20533318 GI:20533318
Homo sapiens (Hsa) Hs20542847 GI:20542847
Homo sapiens (Hsa) Hs20555802 GI:20555802
Homo sapiens (Hsa) Hs20558164 GI:20558164
Homo sapiens (Hsa) Hs22047931 GI:22047931
Homo sapiens (Hsa) Hs22047936 GI:22047936
Saccharomyces cerevisiae (Sce) YLR009w
(S000003999)		 GI:6323037 Q07915
Schizosaccharomyces pombe (Spo) SPAC22E12.13c GI:19115751 Q10353
Encephalitozoon cuniculi (Ecu) ECU02g0810 GI:19074000 Q8SSF6
Encephalitozoon cuniculi (Ecu) ECU07g0930 GI:19074515 Q8SUZ9


GO terms for KOG results:

GO ID GO term GO aspect Evidence codes and associations
GO:0005634 nucleus C
IDA
SpoSPAC22E12.13c
GO:0005730 nucleolus C
IDA
AthAt2g44860
SceS000003999
SpoSPAC22E12.13c
GO:0005840 ribosome C
ISS
AthAt2g44860
GO:0022625 cytosolic large ribosomal subunit C
IDA
AthAt2g44860
ISS
SpoSPAC22E12.13c
GO:0030687 preribosome, large subunit precursor C
IDA
SceS000003999
GO:0003674 molecular_function F
ND
SceS000003999
GO:0003735 structural constituent of ribosome F
ISS
AthAt2g44860
SpoSPAC22E12.13c
GO:0000003 reproduction P
IMP
CelWBGene00004437
GO:0002119 nematode larval development P
IMP
CelWBGene00004437
GO:0006412 translation P
ISS
AthAt2g44860
SpoSPAC22E12.13c
GO:0006898 receptor-mediated endocytosis P
IMP
CelWBGene00004437
GO:0009792 embryo development ending in birth or egg
hatching		 P
IMP
CelWBGene00004437
GO:0010171 body morphogenesis P
IMP
CelWBGene00004437
GO:0040007 growth P
IMP
CelWBGene00004437
GO:0040010 positive regulation of growth rate P
IMP
CelWBGene00004437
GO:0040035 hermaphrodite genitalia development P
IMP
CelWBGene00004437
GO:0042254 ribosome biogenesis P
ISS
AthAt2g44860
GO:0042255 ribosome assembly P
RCA
SceS000003999
GO:0042273 ribosomal large subunit biogenesis P
IMP
SceS000003999
IPI
SceS000003999
RCA
SceS000003999

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HomoloGene results:

HomoloGene cluster Phylogenetic pattern
9462

Species Gene ID NCBI link UniProt link
Homo sapiens (Hsa) RSL24D1 GI:10047102 Q9UHA3
Pan troglodytes (Ptr) RSL24D1 GI:55642163
Canis familiaris (Cfa) RSL24D1 GI:74000755
Mus musculus (Mmu) BC003885 GI:38348464
Mus musculus (Mmu) Gm6457 GI:149269661
Rattus norvegicus (Rno) RGD1309784
(RGD:1309784)		 GI:62079151
Gallus gallus (Gga) C15orf15 GI:50752912
Drosophila melanogaster (Dme) CG6764
(FBgn0037899)		 GI:21356545
Anopheles gambiae (Aga) AgaP_AGAP001545 GI:58395913
Caenorhabditis elegans (Cel) rpl-24.2
(CE05202;
WBGene00004437)		 GI:17505458 Q17606
Schizosaccharomyces pombe (Spo) rpl24-3
(SPAC22E12.13c)		 GI:19115751 Q10353
Saccharomyces cerevisiae (Sce) RLP24
(S000003999)		 GI:6323037 Q07915
Kluyveromyces lactis (Kla) KLLA0E09416g GI:50308743
Eremothecium gossypii (Ego) AGOS_ADR346W GI:45188219
Magnaporthe grisea (Mgr) MGG_10160 GI:39969099
Neurospora crassa (Ncr) NCU05235.1 GI:32408221
Arabidopsis thaliana (Ath) AT2G44860 GI:145331401
Oryza sativa (Osa) Os01g0514000 GI:115437002
Oryza sativa (Osa) Os07g0292800 GI:115471601
Plasmodium falciparum (Pfa) PFE0300c GI:124506043


GO terms for Homologene results:

GO ID GO term GO aspect Evidence codes and associations
GO:0005634 nucleus C
IDA
SpoSPAC22E12.13c
GO:0005730 nucleolus C
IDA
AthAt2g44860
SceS000003999
SpoSPAC22E12.13c
GO:0005840 ribosome C
ISS
AthAt2g44860
GO:0015934 large ribosomal subunit C
ISS
PfaPFE0300c
GO:0022625 cytosolic large ribosomal subunit C
IDA
AthAt2g44860
ISS
DmeFBgn0037899
SpoSPAC22E12.13c
GO:0030687 preribosome, large subunit precursor C
IDA
SceS000003999
GO:0003674 molecular_function F
ND
SceS000003999
GO:0003735 structural constituent of ribosome F
ISS
AthAt2g44860
DmeFBgn0037899
SpoSPAC22E12.13c
GO:0000003 reproduction P
IMP
CelWBGene00004437
GO:0002119 nematode larval development P
IMP
CelWBGene00004437
GO:0006412 translation P
ISS
AthAt2g44860
DmeFBgn0037899
SpoSPAC22E12.13c
GO:0006898 receptor-mediated endocytosis P
IMP
CelWBGene00004437
GO:0009792 embryo development ending in birth or egg
hatching		 P
IMP
CelWBGene00004437
GO:0010171 body morphogenesis P
IMP
CelWBGene00004437
GO:0040007 growth P
IMP
CelWBGene00004437
GO:0040010 positive regulation of growth rate P
IMP
CelWBGene00004437
GO:0040035 hermaphrodite genitalia development P
IMP
CelWBGene00004437
GO:0042254 ribosome biogenesis P
ISS
AthAt2g44860
DmeFBgn0037899
GO:0042255 ribosome assembly P
RCA
SceS000003999
GO:0042273 ribosomal large subunit biogenesis P
IMP
SceS000003999
IPI
SceS000003999
RCA
SceS000003999

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OrthoMCL results:

Selected databases only

OrthoMCL cluster Phylogenetic pattern
OG1_1532

Species OrthoMCL
sequence		 Model organism
protein page		 UniProt link
Anopheles gambiae (Aga) aga3642 ENSANGP00000011631
Ashbya gossypii (Ago) ago2087 ADR346W
Arabidopsis thaliana (Ath) ath11705 At2g44860.1
Caenorhabditis elegans (Cel) cel930 C03D6.8
(CE05202;
WBGene00004437)
Candida glabrata (Cgl) cgl3035 CAGL0J00957g
Cryptococcus neoformans (Cne) cne5417 179.m00270
Dictyostelium discoideum (Ddi) ddi2032 DDB0168982
Debaryomyces hansenii (Dha) dha6726 DEHA0G23012g
Drosophila melanogaster (Dme) dme12039 CG6764-PA
(FBgn0037899)
Danio rerio (Dre) dre14981 ENSDARP00000041737
Encephalitozoon cuniculi (Ecu) ecu79 19074000
Takifugu rubripes (Fru) fru4554 SINFRUP00000162934
Gallus gallus (Gga) gga3842 ENSGALP00000007070
(C15orf15)
Gallus gallus (Gga) gga3841 ENSGALP00000007071
Homo sapiens (Hsa) hsa10673 ENSP00000260443
(RSL24D1)		 Q9UHA3
Kluyveromyces lactis (Kla) kla3375 KLLA0E09416g
Mus musculus (Mmu) mmu27922 ENSMUSP00000034738
(MGI:2681840)		 Q99L28
Mus musculus (Mmu) mmu12338 ENSMUSP00000070266
(MGI:2681840)		 Q99L28
Neurospora crassa (Ncr) ncr5082 NCU05235.2
Oryza sativa (Osa) osa10859 2757.m00150
Oryza sativa (Osa) osa36031 4751.m00105
Oryza sativa (Osa) osa67459 6956.m00152
Plasmodium falciparum (Pfa) pfa3511 PFE0300c
Rattus norvegicus (Rno) rno28917 ENSRNOP00000010089
(RGD:1309784)		 Q6P6G7
Saccharomyces cerevisiae (Sce) sce4089 YLR009W
(S000003999)
Schizosaccharomyces pombe (Spo) spo4120 SPAC22E12.13c Q10353
Yarrowia lipolytica (Yli) yli1139 YALI0B09779g


GO terms for OrthoMCL results:

GO ID GO term GO aspect Evidence codes and associations
GO:0005575 cellular_component C
ND
MmuMGI:2681840
GO:0005634 nucleus C
IDA
SpoSPAC22E12.13c
GO:0005730 nucleolus C
IDA
AthAt2g44860
SceS000003999
SpoSPAC22E12.13c
GO:0005840 ribosome C
ISS
AthAt2g44860
GO:0015934 large ribosomal subunit C
ISS
PfaPFE0300c
GO:0022625 cytosolic large ribosomal subunit C
IDA
AthAt2g44860
ISS
DmeFBgn0037899
SpoSPAC22E12.13c
GO:0030687 preribosome, large subunit precursor C
IDA
SceS000003999
GO:0003674 molecular_function F
ND
MmuMGI:2681840
SceS000003999
GO:0003735 structural constituent of ribosome F
ISS
AthAt2g44860
DmeFBgn0037899
SpoSPAC22E12.13c
GO:0000003 reproduction P
IMP
CelWBGene00004437
GO:0002119 nematode larval development P
IMP
CelWBGene00004437
GO:0006412 translation P
ISS
AthAt2g44860
DmeFBgn0037899
SpoSPAC22E12.13c
GO:0006898 receptor-mediated endocytosis P
IMP
CelWBGene00004437
GO:0008150 biological_process P
ND
MmuMGI:2681840
GO:0009792 embryo development ending in birth or egg
hatching		 P
IMP
CelWBGene00004437
GO:0010171 body morphogenesis P
IMP
CelWBGene00004437
GO:0040007 growth P
IMP
CelWBGene00004437
GO:0040010 positive regulation of growth rate P
IMP
CelWBGene00004437
GO:0040035 hermaphrodite genitalia development P
IMP
CelWBGene00004437
GO:0042254 ribosome biogenesis P
ISS
AthAt2g44860
DmeFBgn0037899
GO:0042255 ribosome assembly P
RCA
SceS000003999
GO:0042273 ribosomal large subunit biogenesis P
IMP
SceS000003999
IPI
SceS000003999
RCA
SceS000003999

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Curated yeast ortholog results:

S. pombe
systematic ID		 S. cerevisiae
systematic ID
SPAC22E12.13c
(Q10353)		 YLR009W
(S000003999)
SPCC330.14c
(O74884)		 YLR009W
(S000003999)
SPAC6G9.09c
(Q92354)		 YLR009W
(S000003999)


GO terms for curated homolog results:

GO ID GO term GO aspect Evidence codes and associations
GO:0005634 nucleus C
IDA
SpoSPAC22E12.13c
GO:0005730 nucleolus C
IDA
SceS000003999
SpoSPAC22E12.13c
GO:0005829 cytosol C
IDA
SpoSPCC330.14c
GO:0022625 cytosolic large ribosomal subunit C
ISS
SpoSPAC6G9.09c
SPAC22E12.13c
SPCC330.14c
GO:0030687 preribosome, large subunit precursor C
IDA
SceS000003999
GO:0003674 molecular_function F
ND
SceS000003999
GO:0003723 RNA binding F
ISS
SpoSPAC6G9.09c
GO:0003735 structural constituent of ribosome F
ISS
SpoSPAC22E12.13c
SPAC6G9.09c
SPCC330.14c
GO:0006412 translation P
ISS
SpoSPAC6G9.09c
SPAC22E12.13c
SPCC330.14c
GO:0042255 ribosome assembly P
RCA
SceS000003999
GO:0042273 ribosomal large subunit biogenesis P
IMP
SceS000003999
IPI
SceS000003999
RCA
SceS000003999

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Search for gene by ID or name:

Query species:

Include wild-cards:   

Search for GO info:  

GO info in one table:

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