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Search term: YLR011W

Gene summary:

Species Saccharomyces cerevisiae (Sce)
Primary name LOT6
SGD link S000004001
Alternative ID YLR011W
Description FMN-dependent NAD(P)H:quinone reductase, may be involved in quinone detoxification; expression elevated at low temperature; sequesters the Cin5p transcription factor in the cytoplasm in complex with the proteasome under reducing conditions
Synonyms YLR011W
Datasets
KOGs
Inparanoid
HomoloGene
OrthoMCL
Curated

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KOG results:

KOG name Phylogenetic pattern
(and link to KOGs with this pattern)
KOG4530 A---YP-

KOGs classification KOGs description
POORLY CHARACTERIZED Predicted flavoprotein

Species KOG link NCBI link UniProt link
Arabidopsis thaliana (Ath) At3g27890 GI:15232856
Saccharomyces cerevisiae (Sce) YLR011w
(S000004001)		 GI:6323039 Q07923
Schizosaccharomyces pombe (Spo) SPCC4B3.06c GI:19075584 Q9USJ6


GO terms for KOG results:

GO ID GO term GO aspect Evidence codes and associations
GO:0005634 nucleus C
IDA
SceS000004001
SpoSPCC4B3.06c
ISS
SpoSPCC4B3.06c
GO:0005737 cytoplasm C
IDA
SceS000004001
ISS
SpoSPCC4B3.06c
GO:0005829 cytosol C
IDA
SceS000004001
SpoSPCC4B3.06c
GO:0005886 plasma membrane C
IDA
AthAt3g27890
GO:0009507 chloroplast C
IDA
AthAt3g27890
GO:0009570 chloroplast stroma C
IDA
AthAt3g27890
GO:0003955 NAD(P)H dehydrogenase (quinone)
activity		 F
IDA
SceS000004001
IMP
SceS000004001
GO:0008134 transcription factor binding F
IDA
SceS000004001
GO:0008752 FMN reductase activity F
ISS
AthAt3g27890
SpoSPCC4B3.06c
GO:0008150 biological_process P
ND
SpoSPCC4B3.06c
GO:0009651 response to salt stress P
IEP
AthAt3g27890
GO:0034599 cellular response to oxidative
stress		 P
IMP
SceS000004001
GO:0042742 defense response to bacterium P
IEP
AthAt3g27890
GO:0042994 cytoplasmic sequestering of transcription
factor		 P
IDA
SceS000004001

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HomoloGene results:

HomoloGene cluster Phylogenetic pattern
6437

Species Gene ID NCBI link UniProt link
Schizosaccharomyces pombe (Spo) SPCC4B3.06c GI:19075584 Q9USJ6
Saccharomyces cerevisiae (Sce) LOT6
(S000004001)		 GI:6323039 Q07923


GO terms for Homologene results:

GO ID GO term GO aspect Evidence codes and associations
GO:0005634 nucleus C
IDA
SceS000004001
SpoSPCC4B3.06c
ISS
SpoSPCC4B3.06c
GO:0005737 cytoplasm C
IDA
SceS000004001
ISS
SpoSPCC4B3.06c
GO:0005829 cytosol C
IDA
SceS000004001
SpoSPCC4B3.06c
GO:0003955 NAD(P)H dehydrogenase (quinone)
activity		 F
IDA
SceS000004001
IMP
SceS000004001
GO:0008134 transcription factor binding F
IDA
SceS000004001
GO:0008752 FMN reductase activity F
ISS
SpoSPCC4B3.06c
GO:0008150 biological_process P
ND
SpoSPCC4B3.06c
GO:0034599 cellular response to oxidative
stress		 P
IMP
SceS000004001
GO:0042994 cytoplasmic sequestering of transcription
factor		 P
IDA
SceS000004001

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OrthoMCL results:

Selected databases only

OrthoMCL cluster Phylogenetic pattern
OG1_6351

Species OrthoMCL
sequence		 Model organism
protein page		 UniProt link
Arabidopsis thaliana (Ath) ath15143 At3g27890.1
Cryptococcus neoformans (Cne) cne4468 177.m03221
Dictyostelium discoideum (Ddi) ddi4834 DDB0185602
Escherichia coli (Eco) eco3592 16131581
Oryza sativa (Osa) osa8615 2623.m00148
Oryza sativa (Osa) osa8618 2623.m00151
Oryza sativa (Osa) osa12555 2843.m00129
Oryza sativa (Osa) osa12564 2843.m00132
Saccharomyces cerevisiae (Sce) sce4091 YLR011W
(S000004001)
Schizosaccharomyces pombe (Spo) spo799 SPCC4B3.06c Q9USJ6


GO terms for OrthoMCL results:

GO ID GO term GO aspect Evidence codes and associations
GO:0005634 nucleus C
IDA
SceS000004001
SpoSPCC4B3.06c
ISS
SpoSPCC4B3.06c
GO:0005737 cytoplasm C
IDA
SceS000004001
ISS
SpoSPCC4B3.06c
GO:0005829 cytosol C
IDA
SceS000004001
SpoSPCC4B3.06c
GO:0005886 plasma membrane C
IDA
AthAt3g27890
GO:0009507 chloroplast C
IDA
AthAt3g27890
GO:0009570 chloroplast stroma C
IDA
AthAt3g27890
GO:0003955 NAD(P)H dehydrogenase (quinone)
activity		 F
IDA
SceS000004001
IMP
SceS000004001
GO:0008134 transcription factor binding F
IDA
SceS000004001
GO:0008752 FMN reductase activity F
ISS
AthAt3g27890
SpoSPCC4B3.06c
GO:0008150 biological_process P
ND
SpoSPCC4B3.06c
GO:0009651 response to salt stress P
IEP
AthAt3g27890
GO:0034599 cellular response to oxidative
stress		 P
IMP
SceS000004001
GO:0042742 defense response to bacterium P
IEP
AthAt3g27890
GO:0042994 cytoplasmic sequestering of transcription
factor		 P
IDA
SceS000004001

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Curated yeast ortholog results:

S. pombe
systematic ID		 S. cerevisiae
systematic ID
SPCC4B3.06c
(Q9USJ6)		 YLR011W
(S000004001)


GO terms for curated homolog results:

GO ID GO term GO aspect Evidence codes and associations
GO:0005634 nucleus C
IDA
SceS000004001
SpoSPCC4B3.06c
ISS
SpoSPCC4B3.06c
GO:0005737 cytoplasm C
IDA
SceS000004001
ISS
SpoSPCC4B3.06c
GO:0005829 cytosol C
IDA
SceS000004001
SpoSPCC4B3.06c
GO:0003955 NAD(P)H dehydrogenase (quinone)
activity		 F
IDA
SceS000004001
IMP
SceS000004001
GO:0008134 transcription factor binding F
IDA
SceS000004001
GO:0008752 FMN reductase activity F
ISS
SpoSPCC4B3.06c
GO:0008150 biological_process P
ND
SpoSPCC4B3.06c
GO:0034599 cellular response to oxidative
stress		 P
IMP
SceS000004001
GO:0042994 cytoplasmic sequestering of transcription
factor		 P
IDA
SceS000004001

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GO info in one table:

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