YOGY Home YOGY Help

Search term: YLR032W

Gene summary:

Species Saccharomyces cerevisiae (Sce)
Primary name RAD5
SGD link S000004022
Alternative ID YLR032W
Description DNA helicase proposed to promote replication fork regression during postreplication repair by template switching; RING finger containing ubiquitin ligase; stimulates the synthesis of free and PCNA-bound polyubiquitin chains by Ubc13p-Mms2p
Synonyms YLR032W
Datasets
KOGs
Inparanoid
HomoloGene
OrthoMCL
Curated

Search for gene by ID or name:

Query species:

Include wild-cards:   

Search for GO info:  

GO info in one table:

KOG results:

KOG name Phylogenetic pattern
(and link to KOGs with this pattern)
KOG1001 AC-HYP-

KOGs classification KOGs description
INFORMATION STORAGE AND PROCESSINGINFORMATION STORAGE AND PROCESSING Helicase-like transcription factor HLTF/DNA helicase RAD5, DEAD-box superfamily

Species KOG link NCBI link UniProt link
Arabidopsis thaliana (Ath) At1g11100 GI:15220286
Arabidopsis thaliana (Ath) At1g50410 GI:15222964
Arabidopsis thaliana (Ath) At1g61140 GI:15219872
Arabidopsis thaliana (Ath) At3g16600 GI:15228256
Arabidopsis thaliana (Ath) At3g20010 GI:15231009
Arabidopsis thaliana (Ath) At5g05130 GI:15238450
Arabidopsis thaliana (Ath) At5g22750 GI:15242960
Arabidopsis thaliana (Ath) At5g43530 GI:15239896
Caenorhabditis elegans (Cel) CE01705_1 GI:17538147
Caenorhabditis elegans (Cel) CE17468 GI:17558240
Caenorhabditis elegans (Cel) CE17469
(WBGene00007725)		 GI:17558242
Caenorhabditis elegans (Cel) CE17473
(WBGene00007728)		 GI:17558250
Caenorhabditis elegans (Cel) CE18078 GI:17562670 O62080
Caenorhabditis elegans (Cel) CE18079 GI:17562672
Caenorhabditis elegans (Cel) CE20697
(WBGene00008944)		 GI:17559866 Q9XXT0
Caenorhabditis elegans (Cel) CE21896
(WBGene00012822)		 GI:17565668
Caenorhabditis elegans (Cel) CE21897
(WBGene00012823)		 GI:17565670 Q9XWY2
Caenorhabditis elegans (Cel) CE21898
(WBGene00012824)		 GI:17565672 Q9XWW9
Homo sapiens (Hsa) Hs21071052
(HLTF)		 GI:21071052 Q14527
Saccharomyces cerevisiae (Sce) YLR032w
(S000004022)		 GI:6323060 P32849
Saccharomyces cerevisiae (Sce) YOR191w
(S000005717)		 GI:6324765 Q08562
Schizosaccharomyces pombe (Spo) SPAC13G6.01c GI:19113739 P36607
Schizosaccharomyces pombe (Spo) SPAC17A2.12 GI:19115158 O13762
Schizosaccharomyces pombe (Spo) SPBC23E6.02 GI:19113394 O60177
Schizosaccharomyces pombe (Spo) SPBC582.10c GI:19111970 Q10332
Arabidopsis thaliana (Ath) At1g11100 GI:15220286
Arabidopsis thaliana (Ath) At1g50410 GI:15222964
Arabidopsis thaliana (Ath) At1g61140 GI:15219872
Arabidopsis thaliana (Ath) At3g16600 GI:15228256
Arabidopsis thaliana (Ath) At3g20010 GI:15231009
Arabidopsis thaliana (Ath) At5g05130 GI:15238450
Arabidopsis thaliana (Ath) At5g22750 GI:15242960
Arabidopsis thaliana (Ath) At5g43530 GI:15239896
Caenorhabditis elegans (Cel) CE01705_1 GI:17538147
Caenorhabditis elegans (Cel) CE17468 GI:17558240
Caenorhabditis elegans (Cel) CE17469
(WBGene00007725)		 GI:17558242
Caenorhabditis elegans (Cel) CE17473
(WBGene00007728)		 GI:17558250
Caenorhabditis elegans (Cel) CE18078 GI:17562670 O62080
Caenorhabditis elegans (Cel) CE18079 GI:17562672
Caenorhabditis elegans (Cel) CE20697
(WBGene00008944)		 GI:17559866 Q9XXT0
Caenorhabditis elegans (Cel) CE21896
(WBGene00012822)		 GI:17565668
Caenorhabditis elegans (Cel) CE21897
(WBGene00012823)		 GI:17565670 Q9XWY2
Caenorhabditis elegans (Cel) CE21898
(WBGene00012824)		 GI:17565672 Q9XWW9
Homo sapiens (Hsa) Hs21071052
(HLTF)		 GI:21071052 Q14527
Saccharomyces cerevisiae (Sce) YLR032w
(S000004022)		 GI:6323060 P32849
Saccharomyces cerevisiae (Sce) YOR191w
(S000005717)		 GI:6324765 Q08562
Schizosaccharomyces pombe (Spo) SPAC13G6.01c GI:19113739 P36607
Schizosaccharomyces pombe (Spo) SPAC17A2.12 GI:19115158 O13762
Schizosaccharomyces pombe (Spo) SPBC23E6.02 GI:19113394 O60177
Schizosaccharomyces pombe (Spo) SPBC582.10c GI:19111970 Q10332


GO terms for KOG results:

GO ID GO term GO aspect Evidence codes and associations
GO:0000113 nucleotide-excision repair factor 4
complex		 C
ISS
SpoSPBC582.10c
GO:0000790 nuclear chromatin C
IDA
SceS000004022
ISS
SpoSPAC17A2.12
SPBC23E6.02
GO:0005634 nucleus C
IDA
HsaHLTF
SceS000005717
SpoSPAC13G6.01c
SPAC17A2.12
SPBC23E6.02
IPI
SceS000005717
TAS
SpoSPAC13G6.01c
GO:0005730 nucleolus C
IDA
SceS000005717
GO:0005737 cytoplasm C
IDA
SpoSPBC582.10c
GO:0005739 mitochondrion C
IDA
SceS000005717
GO:0005829 cytosol C
IDA
SpoSPAC17A2.12
SPBC582.10c
GO:0009941 chloroplast envelope C
IDA
AthAt5g43530
GO:0016585 chromatin remodeling complex C
ISS
SpoSPAC17A2.12
SPBC23E6.02
GO:0000400 four-way junction DNA binding F
IDA
SceS000004022
GO:0000403 Y-form DNA binding F
IDA
SceS000004022
GO:0003677 DNA binding F
ISS
AthAt1g61140
At5g43530
At5g22750
At1g50410
At3g16600
At1g11100
At3g20010
At5g05130
GO:0004003 ATP-dependent DNA helicase activity F
ISS
SpoSPAC17A2.12
SPBC23E6.02
GO:0004386 helicase activity F
ISS
AthAt3g16600
At1g50410
At5g43530
At1g61140
At5g22750
At3g20010
At5g05130
At1g11100
GO:0004842 ubiquitin-protein ligase activity F
ISS
SpoSPAC13G6.01c
SPAC17A2.12
SPBC23E6.02
RCA
SceS000004022
GO:0005515 protein binding F
ISS
AthAt1g50410
At5g22750
At5g43530
At3g20010
At3g16600
At1g61140
At5g05130
GO:0005524 ATP binding F
IC
SpoSPAC13G6.01c
ISS
AthAt1g61140
At1g11100
At5g43530
At5g22750
At5g05130
At3g16600
At3g20010
At1g50410
GO:0008094 DNA-dependent ATPase activity F
IDA
SceS000004022
ISS
SceS000005717
SpoSPBC582.10c
GO:0008270 zinc ion binding F
ISS
AthAt1g61140
At5g05130
At1g50410
At3g16600
At5g22750
At5g43530
At3g20010
SpoSPAC17A2.12
SPBC23E6.02
GO:0009378 four-way junction helicase activity F
IDA
SceS000004022
GO:0016874 ligase activity F
RCA
SceS000004022
GO:0016879 ligase activity, forming carbon-nitrogen
bonds		 F
RCA
SceS000004022
GO:0016881 acid-amino acid ligase activity F
RCA
SceS000004022
GO:0019787 small conjugating protein ligase
activity		 F
RCA
SceS000004022
GO:0032183 SUMO binding F
IPI
SceS000005717
GO:0000209 protein polyubiquitination P
IDA
SceS000004022
GO:0006200 ATP catabolic process P
ISS
SpoSPBC23E6.02
SPAC17A2.12
SPBC582.10c
GO:0006281 DNA repair P
IGI
SpoSPAC13G6.01c
IMP
SpoSPAC13G6.01c
ISS
SpoSPAC17A2.12
SPBC23E6.02
GO:0006289 nucleotide-excision repair P
IMP
SpoSPAC13G6.01c
ISS
SpoSPBC582.10c
GO:0006301 postreplication repair P
IDA
SceS000004022
ISS
SpoSPAC13G6.01c
GO:0006302 double-strand break repair P
IGI
SceS000004022
IMP
SceS000004022
GO:0006333 chromatin assembly or disassembly P
IGI
SceS000005717
IMP
SceS000005717
IPI
SceS000005717
GO:0006338 chromatin remodeling P
ISS
SpoSPAC17A2.12
SPBC23E6.02
GO:0006355 regulation of transcription, DNA-dependent P
TAS
HsaHLTF
GO:0006974 response to DNA damage stimulus P
IMP
SpoSPAC13G6.01c
GO:0007533 mating type switching P
IMP
SceS000005717
GO:0008340 determination of adult lifespan P
IMP
CelWBGene00012822
GO:0009294 DNA mediated transformation P
IMP
AthAt5g22750
GO:0009553 embryo sac development P
IMP
AthAt1g61140
GO:0009650 UV protection P
IMP
SpoSPAC13G6.01c
GO:0010994 free ubiquitin chain polymerization P
IDA
SceS000004022
GO:0016567 protein ubiquitination P
ISS
SpoSPAC17A2.12
SPBC23E6.02
NAS
SpoSPAC13G6.01c
GO:0032446 protein modification by small protein
conjugation		 P
RCA
SceS000004022

Back to the top

HomoloGene results:

HomoloGene cluster Phylogenetic pattern
6441

Species Gene ID NCBI link UniProt link
Schizosaccharomyces pombe (Spo) rad8
(SPAC13G6.01c)		 GI:67989453 P36607
Saccharomyces cerevisiae (Sce) RAD5
(S000004022)		 GI:6323060 P32849
Kluyveromyces lactis (Kla) KLLA0F17479g GI:50311677
Eremothecium gossypii (Ego) AGOS_AFR220W GI:45198738
Magnaporthe grisea (Mgr) MGG_05032 GI:39940416
Neurospora crassa (Ncr) NCU09516.1 GI:32418794
Arabidopsis thaliana (Ath) RAD5 GI:15242960
Oryza sativa (Osa) Os02g0527100 GI:115446443