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Search term: YLR043C


Gene summary:

Species Saccharomyces cerevisiae (Sce)
Primary name TRX1
SGD link S000004033
Alternative ID YLR043C
Description Cytoplasmic thioredoxin isoenzyme of the thioredoxin system which protects cells against oxidative and reductive stress, forms LMA1 complex with Pbi2p, acts as a cofactor for Tsa1p, required for ER-Golgi transport and vacuole inheritance
Synonyms YLR043C
Datasets
KOGs
Inparanoid
HomoloGene
OrthoMCL
Curated

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GO info in one table:


KOG results:

KOG name Phylogenetic pattern
(and link to KOGs with this pattern)
KOG0907 ACDHYP-

KOGs classification KOGs description
CELLULAR PROCESSES AND SIGNALING Thioredoxin

Species KOG link NCBI link UniProt link
Arabidopsis thaliana (Ath) At1g08570 GI:15223262
Arabidopsis thaliana (Ath) At1g11530 GI:15220418
Arabidopsis thaliana (Ath) At1g19730 GI:15223645
Arabidopsis thaliana (Ath) At1g31020 GI:15221594
Arabidopsis thaliana (Ath) At1g45145 GI:15219537
Arabidopsis thaliana (Ath) At1g53300_2 GI:15219271
Arabidopsis thaliana (Ath) At1g59730 GI:15218902
Arabidopsis thaliana (Ath) At1g69880 GI:15222488
Arabidopsis thaliana (Ath) At1g76080 GI:15222954
Arabidopsis thaliana (Ath) At2g33270 GI:15225825
Arabidopsis thaliana (Ath) At2g35010 GI:15226875
Arabidopsis thaliana (Ath) At2g40790 GI:15226744
Arabidopsis thaliana (Ath) At2g41680_2 GI:7488371
Arabidopsis thaliana (Ath) At3g02730 GI:15232959
Arabidopsis thaliana (Ath) At3g06730 GI:15230779
Arabidopsis thaliana (Ath) At3g08710 GI:15231958
Arabidopsis thaliana (Ath) At3g14950_2 GI:15232444
Arabidopsis thaliana (Ath) At3g17880 GI:15229541
Arabidopsis thaliana (Ath) At3g51030 GI:15230385
Arabidopsis thaliana (Ath) At3g56420 GI:15228921
Arabidopsis thaliana (Ath) At3g58620_2 GI:15231094
Arabidopsis thaliana (Ath) At4g26160 GI:15236134
Arabidopsis thaliana (Ath) At4g29670 GI:7488369
Arabidopsis thaliana (Ath) At4g37200 GI:15235475
Arabidopsis thaliana (Ath) At5g04260 GI:15237664
Arabidopsis thaliana (Ath) At5g06690 GI:9759297
Arabidopsis thaliana (Ath) At5g16400 GI:15237341
Arabidopsis thaliana (Ath) At5g39950 GI:15242525
Arabidopsis thaliana (Ath) At5g42980 GI:15239136
Arabidopsis thaliana (Ath) At5g61440 GI:15240254
Caenorhabditis elegans (Cel) CE01745
(WBGene00015062)
GI:17531233
Caenorhabditis elegans (Cel) CE21928
(WBGene00021548)
GI:17509965 Q9TXY8
Caenorhabditis elegans (Cel) CE23786_1 GI:17507705 Q9TW67
Caenorhabditis elegans (Cel) CE26952
(WBGene00020917)
GI:17509457 O45017
Drosophila melanogaster (Dme) 7290567 GI:7290567
Drosophila melanogaster (Dme) 7290568 GI:17530795
Drosophila melanogaster (Dme) 7292727 GI:7292727 B7Z144
Drosophila melanogaster (Dme) 7293614 GI:7293614
Drosophila melanogaster (Dme) 7294366 GI:7294366
Drosophila melanogaster (Dme) 7297539
(FBgn0040070)
GI:17648013
Homo sapiens (Hsa) Hs14740408 GI:14740408
Homo sapiens (Hsa) Hs18875316 GI:18875316
Homo sapiens (Hsa) Hs22045004 GI:22045004
Homo sapiens (Hsa) Hs22058463 GI:22058463
Homo sapiens (Hsa) Hs4507745 GI:4507745
Homo sapiens (Hsa) Hs7706154_1 GI:7706154
Saccharomyces cerevisiae (Sce) YCR083w
(S000000679)
GI:6319925 P25372
Saccharomyces cerevisiae (Sce) YGR209c
(S000003441)
GI:6321648 P22803
Saccharomyces cerevisiae (Sce) YLR043c
(S000004033)
GI:6323072 P22217
Schizosaccharomyces pombe (Spo) SPAC7D4.07c GI:19114764 O14463
Schizosaccharomyces pombe (Spo) SPBC12D12.07c GI:19112746 O94504
Arabidopsis thaliana (Ath) At1g08570 GI:15223262
Arabidopsis thaliana (Ath) At1g11530 GI:15220418
Arabidopsis thaliana (Ath) At1g19730 GI:15223645
Arabidopsis thaliana (Ath) At1g31020 GI:15221594
Arabidopsis thaliana (Ath) At1g45145 GI:15219537
Arabidopsis thaliana (Ath) At1g53300_2 GI:15219271
Arabidopsis thaliana (Ath) At1g59730 GI:15218902
Arabidopsis thaliana (Ath) At1g69880 GI:15222488
Arabidopsis thaliana (Ath) At1g76080 GI:15222954
Arabidopsis thaliana (Ath) At2g33270 GI:15225825
Arabidopsis thaliana (Ath) At2g35010 GI:15226875
Arabidopsis thaliana (Ath) At2g40790 GI:15226744
Arabidopsis thaliana (Ath) At2g41680_2 GI:7488371
Arabidopsis thaliana (Ath) At3g02730 GI:15232959
Arabidopsis thaliana (Ath) At3g06730 GI:15230779
Arabidopsis thaliana (Ath) At3g08710 GI:15231958
Arabidopsis thaliana (Ath) At3g14950_2 GI:15232444
Arabidopsis thaliana (Ath) At3g17880 GI:15229541
Arabidopsis thaliana (Ath) At3g51030 GI:15230385
Arabidopsis thaliana (Ath) At3g56420 GI:15228921
Arabidopsis thaliana (Ath) At3g58620_2 GI:15231094
Arabidopsis thaliana (Ath) At4g26160 GI:15236134
Arabidopsis thaliana (Ath) At4g29670 GI:7488369
Arabidopsis thaliana (Ath) At4g37200 GI:15235475
Arabidopsis thaliana (Ath) At5g04260 GI:15237664
Arabidopsis thaliana (Ath) At5g06690 GI:9759297
Arabidopsis thaliana (Ath) At5g16400 GI:15237341
Arabidopsis thaliana (Ath) At5g39950 GI:15242525
Arabidopsis thaliana (Ath) At5g42980 GI:15239136
Arabidopsis thaliana (Ath) At5g61440 GI:15240254
Caenorhabditis elegans (Cel) CE01745
(WBGene00015062)
GI:17531233
Caenorhabditis elegans (Cel) CE21928
(WBGene00021548)
GI:17509965 Q9TXY8
Caenorhabditis elegans (Cel) CE23786_1 GI:17507705 Q9TW67
Caenorhabditis elegans (Cel) CE26952
(WBGene00020917)
GI:17509457 O45017
Drosophila melanogaster (Dme) 7290567 GI:7290567
Drosophila melanogaster (Dme) 7290568 GI:17530795
Drosophila melanogaster (Dme) 7292727 GI:7292727 B7Z144
Drosophila melanogaster (Dme) 7293614 GI:7293614
Drosophila melanogaster (Dme) 7294366 GI:7294366
Drosophila melanogaster (Dme) 7297539
(FBgn0040070)
GI:17648013
Homo sapiens (Hsa) Hs14740408 GI:14740408
Homo sapiens (Hsa) Hs18875316 GI:18875316
Homo sapiens (Hsa) Hs22045004 GI:22045004
Homo sapiens (Hsa) Hs22058463 GI:22058463
Homo sapiens (Hsa) Hs4507745 GI:4507745
Homo sapiens (Hsa) Hs7706154_1 GI:7706154
Saccharomyces cerevisiae (Sce) YCR083w
(S000000679)
GI:6319925 P25372
Saccharomyces cerevisiae (Sce) YGR209c
(S000003441)
GI:6321648 P22803
Saccharomyces cerevisiae (Sce) YLR043c
(S000004033)
GI:6323072 P22217
Schizosaccharomyces pombe (Spo) SPAC7D4.07c GI:19114764 O14463
Schizosaccharomyces pombe (Spo) SPBC12D12.07c GI:19112746 O94504


GO terms for KOG results:

GO ID GO term GO aspect Evidence codes and associations
GO:0000324 fungal-type vacuole C
IPI
SceS000003441
S000004033
GO:0005575 cellular_component C
ND
AthAt1g69880
At3g56420
At1g59730
At3g58620
At3g14950
At3g17880
GO:0005618 cell wall C
IDA
AthAt5g42980
GO:0005634 nucleus C
IDA
AthAt3g08710
CelWBGene00015062
DmeFBgn0040070
SpoSPAC7D4.07c
GO:0005737 cytoplasm C
IDA
CelWBGene00015062
WBGene00010160
TAS
SpoSPAC7D4.07c
GO:0005739 mitochondrion C
IDA
AthAt5g42980
SceS000000679
SpoSPBC12D12.07c
TAS
SpoSPBC12D12.07c
GO:0005773 vacuole C
IDA
AthAt5g42980
GO:0005829 cytosol C
IDA
AthAt2g40790
At1g11530
At3g08710
At5g42980
SceS000003441
S000004033
SpoSPAC7D4.07c
TAS
AthAt1g19730
At1g45145
At3g51030
At5g39950
At5g42980
GO:0005886 plasma membrane C
IDA
AthAt1g45145
At3g08710
At5g39950
At5g42980
GO:0009295 nucleoid C
IDA
AthAt3g06730
GO:0009507 chloroplast C
IDA
AthAt2g41680
At3g06730
At1g76080
At1g08570
At3g02730
At2g33270
At4g26160
At4g29670
At4g37200
At5g16400
At5g42980
At5g61440
GO:0009534 chloroplast thylakoid C
IDA
AthAt4g37200
GO:0009535 chloroplast thylakoid membrane C
IDA
AthAt4g37200
GO:0009536 plastid C
IDA
AthAt3g08710
GO:0009570 chloroplast stroma C
IDA
AthAt1g08570
At2g41680
At3g02730
At1g76080
At4g26160
At5g04260
At5g16400
At5g06690
At5g42980
GO:0009579 thylakoid C
IDA
AthAt3g06730
GO:0009941 chloroplast envelope C
IDA
AthAt1g76080
GO:0016020 membrane C
IDA
AthAt5g42980
GO:0031969 chloroplast membrane C
IDA
AthAt1g08570
At4g26160
GO:0043025 neuronal cell body C
IDA
CelWBGene00015062
GO:0000224 peptide-N4-(N-acetyl-beta-glucosaminyl)asparagine
amidase activity
F
IDA
CelWBGene00010160
GO:0003756 protein disulfide isomerase activity F
IDA
AthAt1g11530
At2g40790
GO:0004791 thioredoxin-disulfide reductase
activity
F
IMP
AthAt2g41680
ISS
AthAt2g41680
GO:0005515 protein binding F
IPI
AthAt3g17880
At2g33270
SpoSPAC7D4.07c
SPBC12D12.07c
GO:0008047 enzyme activator activity F
IDA
AthAt3g02730
At5g16400
GO:0015035 protein disulfide oxidoreductase
activity
F
IDA
AthAt3g06730
CelWBGene00010160
SpoSPAC7D4.07c
ISS
SpoSPBC12D12.07c
GO:0015036 disulfide oxidoreductase activity F
IDA
DmeFBgn0040070
SceS000000679
S000004033
ISS
DmeFBgn0040070
SceS000003441
S000004033
NAS
DmeFBgn0040070
GO:0016209 antioxidant activity F
IDA
SpoSPAC7D4.07c
GO:0016671 oxidoreductase activity, acting on sulfur group of
donors, disulfide as acceptor
F
IDA
AthAt1g08570
At1g19730
At1g45145
At3g17880
At3g51030
At4g26160
At4g37200
At4g29670
At5g39950
At5g42980
GO:0047134 protein-disulfide reductase activity F
IDA
AthAt3g06730
GO:0000003 reproduction P
IMP
CelWBGene00010160
GO:0000011 vacuole inheritance P
IMP
SceS000003441
S000004033
GO:0000050 urea cycle P
IMP
SpoSPBC12D12.07c
GO:0000103 sulfate assimilation P
IGI
AthAt5g39950
SceS000003441
S000004033
GO:0006275 regulation of DNA replication P
IGI
SceS000004033
S000003441
GO:0006467 protein thiol-disulfide exchange P
IDA
AthAt1g11530
At2g40790
SpoSPAC7D4.07c
NAS
SpoSPBC12D12.07c
GO:0006508 proteolysis P
RCA
SceS000003441
GO:0006517 protein deglycosylation P
IDA
CelWBGene00010160
IGI
CelWBGene00010160
GO:0006888 ER to Golgi vesicle-mediated transport P
IDA
SceS000003441
S000004033
GO:0006890 retrograde vesicle-mediated transport, Golgi to
ER
P
IDA
SceS000003441
S000004033
GO:0006974 response to DNA damage stimulus P
IMP
DmeFBgn0040070
GO:0006979 response to oxidative stress P
IEP
AthAt1g45145
IMP
DmeFBgn0040070
GO:0007039 vacuolar protein catabolic process P
RCA
SceS000003441
GO:0007154 cell communication P
IDA
AthAt3g08710
GO:0008340 determination of adult lifespan P
IMP
CelWBGene00015062
DmeFBgn0040070
GO:0009657 plastid organization P
IMP
AthAt3g06730
GO:0010188 response to microbial phytotoxin P
IMP
AthAt1g45145
At5g42980
GO:0010190 cytochrome b6f complex assembly P
IMP
AthAt4g37200
GO:0030433 ER-associated protein catabolic
process
P
IGI
CelWBGene00010160
GO:0034599 cellular response to oxidative
stress
P
IMP
SceS000000679
ISS
SceS000003441
S000004033
GO:0034614 cellular response to reactive oxygen
species
P
IDA
SpoSPAC7D4.07c
SPBC12D12.07c
GO:0042144 vacuole fusion, non-autophagic P
IDA
SceS000004033
S000003441
GO:0042450 arginine biosynthetic process via
ornithine
P
IGI
SpoSPBC12D12.07c
GO:0042542 response to hydrogen peroxide P
IGI
AthAt5g42980
GO:0042744 hydrogen peroxide catabolic process P
IMP
AthAt2g41680
GO:0043085 positive regulation of catalytic
activity
P
IDA
AthAt3g02730
At5g16400
GO:0045454 cell redox homeostasis P
IDA
DmeFBgn0040070
IGI
CelWBGene00010160
IMP
AthAt3g06730
RCA
SceS000004033
S000003441
TAS
SceS000004033
S000003441
GO:0046686 response to cadmium ion P
IEP
AthAt1g45145
GO:0050832 defense response to fungus P
IMP
AthAt1g45145
At5g42980
GO:0055114 oxidation reduction P
RCA
SceS000000679
GO:0080058 protein amino acid deglutathionylation P
IDA
SceS000003441
S000004033
IGI
SceS000004033
S000003441
GO:0090329 regulation of DNA-dependent DNA
replication
P
ISS
SpoSPAC7D4.07c

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HomoloGene results:

HomoloGene cluster Phylogenetic pattern
55732

Species Gene ID NCBI link UniProt link
Homo sapiens (Hsa) TXN GI:50592994
Pan troglodytes (Ptr) TXN GI:114626146
Mus musculus (Mmu) Txn1
(MGI:98874)
GI:6755911 P10639
Rattus norvegicus (Rno) Txn1
(RGD:621157)
GI:16758644
Gallus gallus (Gga) TXN GI:45382053
Drosophila melanogaster (Dme) Trx-2
(FBgn0040070)
GI:17648013
Anopheles gambiae (Aga) TRX1 GI:118790467
Schizosaccharomyces pombe (Spo) trx1
(SPAC7D4.07c)
GI:19114764 O14463
Saccharomyces cerevisiae (Sce) TRX2
(S000003441)
GI:6321648 P22803
Saccharomyces cerevisiae (Sce) TRX1
(S000004033)
GI:6323072 P22217
Kluyveromyces lactis (Kla) KLLA0E16401g GI:50309357
Eremothecium gossypii (Ego) AGOS_ACL131W GI:45185557
Magnaporthe grisea (Mgr) MGG_04236 GI:39944450
Neurospora crassa (Ncr) NCU06556.1 GI:32411861
Arabidopsis thaliana (Ath) ATTRX2 GI:15242525
Oryza sativa (Osa) Os03g0800700 GI:115455973
Oryza sativa (Osa) Os07g0190800 GI:115470983
Plasmodium falciparum (Pfa) PF14_0545 GI:124809933