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Search term: YLR051C

Gene summary:

Species Saccharomyces cerevisiae (Sce)
Primary name FCF2
SGD link S000004041
Alternative ID YLR051C
Description Essential nucleolar protein involved in the early steps of 35S rRNA processing; interacts with Faf1p; member of a transcriptionally co-regulated set of genes called the RRB regulon
Synonyms YLR051C
Datasets
KOGs
Inparanoid
HomoloGene
OrthoMCL
Curated

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Search for GO info:  

GO info in one table:

KOG results:

KOG name Phylogenetic pattern
(and link to KOGs with this pattern)
KOG3100 ACDHYP-

KOGs classification KOGs description
POORLY CHARACTERIZED Uncharacterized conserved protein

Species KOG link NCBI link UniProt link
Arabidopsis thaliana (Ath) At1g54770 GI:15221891
Caenorhabditis elegans (Cel) CE25336
(WBGene00021715)		 GI:17537287 Q9N4U1
Drosophila melanogaster (Dme) 7298808_1 GI:7298808
Homo sapiens (Hsa) Hs7657204 GI:7657204
Saccharomyces cerevisiae (Sce) YLR051c
(S000004041)		 GI:6323080 Q12035
Schizosaccharomyces pombe (Spo) SPAC3G9.15c GI:19114999 O42877


GO terms for KOG results:

GO ID GO term GO aspect Evidence codes and associations
GO:0005575 cellular_component C
ND
AthAt1g54770
GO:0005634 nucleus C
IDA
SceS000004041
SpoSPAC3G9.15c
ISS
SpoSPAC3G9.15c
GO:0005730 nucleolus C
IDA
SceS000004041
SpoSPAC3G9.15c
ISS
SpoSPAC3G9.15c
GO:0003674 molecular_function F
ND
AthAt1g54770
SceS000004041
SpoSPAC3G9.15c
GO:0000003 reproduction P
IMP
CelWBGene00021715
GO:0000447 endonucleolytic cleavage in ITS1 to separate
SSU-rRNA from 5.8S rRNA and LSU-rRNA from
tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA,
LSU-rRNA)		 P
IMP
SceS000004041
GO:0000472 endonucleolytic cleavage to generate mature 5'-end
of SSU-rRNA from (SSU-rRNA, 5.8S rRNA,
LSU-rRNA)		 P
IMP
SceS000004041
GO:0000480 endonucleolytic cleavage in 5'-ETS of tricistronic
rRNA transcript (SSU-rRNA, 5.8S rRNA,
LSU-rRNA)		 P
IMP
SceS000004041
GO:0002009 morphogenesis of an epithelium P
IMP
CelWBGene00021715
GO:0002119 nematode larval development P
IMP
CelWBGene00021715
GO:0006364 rRNA processing P
ISS
SpoSPAC3G9.15c
GO:0006898 receptor-mediated endocytosis P
IMP
CelWBGene00021715
GO:0008150 biological_process P
ND
AthAt1g54770
GO:0009792 embryo development ending in birth or egg
hatching		 P
IMP
CelWBGene00021715
GO:0040007 growth P
IMP
CelWBGene00021715
GO:0040010 positive regulation of growth rate P
IMP
CelWBGene00021715

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HomoloGene results:

HomoloGene cluster Phylogenetic pattern
40961

Species Gene ID NCBI link UniProt link
Homo sapiens (Hsa) DNTTIP2 GI:54633315
Pan troglodytes (Ptr) DNTTIP2 GI:114557924
Canis familiaris (Cfa) DNTTIP2 GI:73960029
Mus musculus (Mmu) Dnttip2
(MGI:1923173)		 GI:24418931 Q8R2M2
Drosophila melanogaster (Dme) CG1142
(FBgn0037504)		 GI:28573192
Caenorhabditis elegans (Cel) Y49F6B.2
(CE25336;
WBGene00021715)		 GI:17537287 Q9N4U1
Schizosaccharomyces pombe (Spo) fcf2
(SPAC3G9.15c)		 GI:63054590 O42877
Saccharomyces cerevisiae (Sce) FCF2
(S000004041)		 GI:6323080 Q12035
Kluyveromyces lactis (Kla) KLLA0F25278g GI:50312347
Eremothecium gossypii (Ego) AGOS_AFR514C GI:45199032
Magnaporthe grisea (Mgr) MGG_00473 GI:39974761
Neurospora crassa (Ncr) NCU00115.1 GI:32403176
Arabidopsis thaliana (Ath) AT1G54770 GI:15221891
Arabidopsis thaliana (Ath) AT5G30495 GI:30692242
Oryza sativa (Osa) Os02g0730500 GI:115448469


GO terms for Homologene results:

GO ID GO term GO aspect Evidence codes and associations
GO:0005575 cellular_component C
ND
AthAt1g54770
AT5G30495
MmuMGI:1923173
GO:0005634 nucleus C
IDA
SceS000004041
SpoSPAC3G9.15c
ISS
SpoSPAC3G9.15c
GO:0005730 nucleolus C
IDA
SceS000004041
SpoSPAC3G9.15c
ISS
SpoSPAC3G9.15c
GO:0003674 molecular_function F
ND
AthAt1g54770
AT5G30495
MmuMGI:1923173
SceS000004041
SpoSPAC3G9.15c
GO:0000003 reproduction P
IMP
CelWBGene00021715
GO:0000447 endonucleolytic cleavage in ITS1 to separate
SSU-rRNA from 5.8S rRNA and LSU-rRNA from
tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA,
LSU-rRNA)		 P
IMP
SceS000004041
GO:0000472 endonucleolytic cleavage to generate mature 5'-end
of SSU-rRNA from (SSU-rRNA, 5.8S rRNA,
LSU-rRNA)		 P
IMP
SceS000004041
GO:0000480 endonucleolytic cleavage in 5'-ETS of tricistronic
rRNA transcript (SSU-rRNA, 5.8S rRNA,
LSU-rRNA)		 P
IMP
SceS000004041
GO:0002009 morphogenesis of an epithelium P
IMP
CelWBGene00021715
GO:0002119 nematode larval development P
IMP
CelWBGene00021715
GO:0006364 rRNA processing P
ISS
SpoSPAC3G9.15c
GO:0006898 receptor-mediated endocytosis P
IMP
CelWBGene00021715
GO:0008150 biological_process P
ND
AthAt1g54770
AT5G30495
MmuMGI:1923173
GO:0009792 embryo development ending in birth or egg
hatching		 P
IMP
CelWBGene00021715
GO:0040007 growth P
IMP
CelWBGene00021715
GO:0040010 positive regulation of growth rate P
IMP
CelWBGene00021715

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OrthoMCL results:

Selected databases only

OrthoMCL cluster Phylogenetic pattern
OG1_3651

Species OrthoMCL
sequence		 Model organism
protein page		 UniProt link
Anopheles gambiae (Aga) aga10882 ENSANGP00000016794
Ashbya gossypii (Ago) ago3706 AFR514C
Arabidopsis thaliana (Ath) ath4794 At1g54770.1
Arabidopsis thaliana (Ath) ath25195 At5g30495.1
Arabidopsis thaliana (Ath) ath25196 At5g30495.2
Caenorhabditis elegans (Cel) cel19374 Y49F6B.2
(CE25336;
WBGene00021715)
Candida glabrata (Cgl) cgl1314 CAGL0F01925g
Cryptococcus neoformans (Cne) cne2730 183.m01664
Debaryomyces hansenii (Dha) dha1492 DEHA0C01353g
Drosophila melanogaster (Dme) dme11377 CG1142-PA
(FBgn0037504)
Danio rerio (Dre) dre22467 ENSDARP00000017578
Takifugu rubripes (Fru) fru2253 SINFRUP00000129708
Gallus gallus (Gga) gga22477 ENSGALP00000009278
Homo sapiens (Hsa) hsa1516 ENSP00000183866
Kluyveromyces lactis (Kla) kla5207 KLLA0F25278g
Mus musculus (Mmu) mmu17489 ENSMUSP00000045043
(MGI:1923173)		 Q8R2M2
Neurospora crassa (Ncr) ncr113 NCU00115.2
Oryza sativa (Osa) osa29934 4339.m00188
Oryza sativa (Osa) osa79638 7448.m00144
Rattus norvegicus (Rno) rno16945 ENSRNOP00000037874
Rattus norvegicus (Rno) rno16946 ENSRNOP00000048670
Saccharomyces cerevisiae (Sce) sce4132 YLR051C
(S000004041)
Schizosaccharomyces pombe (Spo) spo4281 SPAC3G9.15c O42877
Yarrowia lipolytica (Yli) yli882 YALI0B03278g


GO terms for OrthoMCL results:

GO ID GO term GO aspect Evidence codes and associations
GO:0005575 cellular_component C
ND
AthAt1g54770
AT5G30495
MmuMGI:1923173
GO:0005634 nucleus C
IDA
SceS000004041
SpoSPAC3G9.15c
ISS
SpoSPAC3G9.15c
GO:0005730 nucleolus C
IDA
SceS000004041
SpoSPAC3G9.15c
ISS
SpoSPAC3G9.15c
GO:0003674 molecular_function F
ND
AthAt1g54770
AT5G30495
MmuMGI:1923173
SceS000004041
SpoSPAC3G9.15c
GO:0000003 reproduction P
IMP
CelWBGene00021715
GO:0000447 endonucleolytic cleavage in ITS1 to separate
SSU-rRNA from 5.8S rRNA and LSU-rRNA from
tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA,
LSU-rRNA)		 P
IMP
SceS000004041
GO:0000472 endonucleolytic cleavage to generate mature 5'-end
of SSU-rRNA from (SSU-rRNA, 5.8S rRNA,
LSU-rRNA)		 P
IMP
SceS000004041
GO:0000480 endonucleolytic cleavage in 5'-ETS of tricistronic
rRNA transcript (SSU-rRNA, 5.8S rRNA,
LSU-rRNA)		 P
IMP
SceS000004041
GO:0002009 morphogenesis of an epithelium P
IMP
CelWBGene00021715
GO:0002119 nematode larval development P
IMP
CelWBGene00021715
GO:0006364 rRNA processing P
ISS
SpoSPAC3G9.15c
GO:0006898 receptor-mediated endocytosis P
IMP
CelWBGene00021715
GO:0008150 biological_process P
ND
AthAt1g54770
AT5G30495
MmuMGI:1923173
GO:0009792 embryo development ending in birth or egg
hatching		 P
IMP
CelWBGene00021715
GO:0040007 growth P
IMP
CelWBGene00021715
GO:0040010 positive regulation of growth rate P
IMP
CelWBGene00021715

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Curated yeast ortholog results:

S. pombe
systematic ID		 S. cerevisiae
systematic ID
SPAC3G9.15c
(O42877)		 YLR051C
(S000004041)


GO terms for curated homolog results:

GO ID GO term GO aspect Evidence codes and associations
GO:0005634 nucleus C
IDA
SceS000004041
SpoSPAC3G9.15c
ISS
SpoSPAC3G9.15c
GO:0005730 nucleolus C
IDA
SceS000004041
SpoSPAC3G9.15c
ISS
SpoSPAC3G9.15c
GO:0003674 molecular_function F
ND
SceS000004041
SpoSPAC3G9.15c
GO:0000447 endonucleolytic cleavage in ITS1 to separate
SSU-rRNA from 5.8S rRNA and LSU-rRNA from
tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA,
LSU-rRNA)		 P
IMP
SceS000004041
GO:0000472 endonucleolytic cleavage to generate mature 5'-end
of SSU-rRNA from (SSU-rRNA, 5.8S rRNA,
LSU-rRNA)		 P
IMP
SceS000004041
GO:0000480 endonucleolytic cleavage in 5'-ETS of tricistronic
rRNA transcript (SSU-rRNA, 5.8S rRNA,
LSU-rRNA)		 P
IMP
SceS000004041
GO:0006364 rRNA processing P
ISS
SpoSPAC3G9.15c

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Search for gene by ID or name:

Query species:

Include wild-cards:   

Search for GO info:  

GO info in one table:

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