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Search term: YLR055C

Gene summary:

Species Saccharomyces cerevisiae (Sce)
Primary name SPT8
SGD link S000004045
Alternative ID YLR055C
Description Subunit of the SAGA transcriptional regulatory complex but not present in SAGA-like complex SLIK/SALSA, required for SAGA-mediated inhibition at some promoters
Synonyms YLR055C
Datasets
KOGs
Inparanoid
HomoloGene
OrthoMCL
Curated

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HomoloGene results:

HomoloGene cluster Phylogenetic pattern
6445

Species Gene ID NCBI link UniProt link
Saccharomyces cerevisiae (Sce) SPT8
(S000004045)		 GI:6323084
Kluyveromyces lactis (Kla) KLLA0F08811g GI:50310915
Eremothecium gossypii (Ego) AGOS_AFR153W GI:45198671
Magnaporthe grisea (Mgr) MGG_10590 GI:145614799
Neurospora crassa (Ncr) NCU09208.1 GI:32422313


GO terms for Homologene results:

GO ID GO term GO aspect Evidence codes and associations
GO:0000124 SAGA complex C
IDA
SceS000004045
GO:0005634 nucleus C
IDA
SceS000004045
GO:0005667 transcription factor complex C
RCA
SceS000004045
GO:0005669 transcription factor TFIID complex C
RCA
SceS000004045
GO:0016591 DNA-directed RNA polymerase II,
holoenzyme		 C
RCA
SceS000004045
GO:0003702 RNA polymerase II transcription factor
activity		 F
RCA
SceS000004045
GO:0003712 transcription cofactor activity F
IMP
SceS000004045
IPI
SceS000004045
GO:0017025 TATA-binding protein binding F
IDA
SceS000004045
IMP
SceS000004045
GO:0000122 negative regulation of transcription from RNA
polymerase II promoter		 P
IDA
SceS000004045
IMP
SceS000004045
GO:0006325 chromatin organization P
RCA
SceS000004045
GO:0006473 protein amino acid acetylation P
RCA
SceS000004045
GO:0006730 one-carbon metabolic process P
RCA
SceS000004045
GO:0016481 negative regulation of transcription P
RCA
SceS000004045
GO:0016568 chromatin modification P
IDA
SceS000004045
GO:0016569 covalent chromatin modification P
RCA
SceS000004045
GO:0016570 histone modification P
RCA
SceS000004045
GO:0016573 histone acetylation P
IDA
SceS000004045
RCA
SceS000004045
GO:0043543 protein amino acid acylation P
RCA
SceS000004045
GO:0045944 positive regulation of transcription from RNA
polymerase II promoter		 P
IMP
SceS000004045
GO:0051276 chromosome organization P
RCA
SceS000004045

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OrthoMCL results:

Selected databases only

OrthoMCL cluster Phylogenetic pattern
OG1_10398

Species OrthoMCL
sequence		 Model organism
protein page		 UniProt link
Ashbya gossypii (Ago) ago3345 AFR153W
Candida glabrata (Cgl) cgl1310 CAGL0F01837g
Cryptococcus neoformans (Cne) cne1494 180.m00450
Debaryomyces hansenii (Dha) dha5012 DEHA0F14135g
Danio rerio (Dre) dre594 ENSDARP00000018625
Takifugu rubripes (Fru) fru3323 SINFRUP00000143666
Kluyveromyces lactis (Kla) kla4480 KLLA0F08811g
Neurospora crassa (Ncr) ncr8975 NCU09208.2
Saccharomyces cerevisiae (Sce) sce4136 YLR055C
(S000004045)
Schizosaccharomyces pombe (Spo) spo926 SPBC14C8.17c O60097
Yarrowia lipolytica (Yli) yli4848 YALI0E23804g


GO terms for OrthoMCL results:

GO ID GO term GO aspect Evidence codes and associations
GO:0000124 SAGA complex C
IDA
SceS000004045
ISS
SpoSPBC14C8.17c
GO:0000790 nuclear chromatin C
IC
SpoSPBC14C8.17c
GO:0005634 nucleus C
IDA
SceS000004045
SpoSPBC14C8.17c
ISS
SpoSPBC14C8.17c
GO:0005667 transcription factor complex C
RCA
SceS000004045
GO:0005669 transcription factor TFIID complex C
RCA
SceS000004045
GO:0005829 cytosol C
IDA
SpoSPBC14C8.17c
GO:0016591 DNA-directed RNA polymerase II,
holoenzyme		 C
RCA
SceS000004045
GO:0003702 RNA polymerase II transcription factor
activity		 F
RCA
SceS000004045
GO:0003712 transcription cofactor activity F
IMP
SceS000004045
IPI
SceS000004045
ISS
SpoSPBC14C8.17c
GO:0017025 TATA-binding protein binding F
IDA
SceS000004045
IMP
SceS000004045
ISS
SpoSPBC14C8.17c
GO:0000122 negative regulation of transcription from RNA
polymerase II promoter		 P
IDA
SceS000004045
IMP
SceS000004045
GO:0006325 chromatin organization P
RCA
SceS000004045
GO:0006338 chromatin remodeling P
IC
SpoSPBC14C8.17c
GO:0006357 regulation of transcription from RNA polymerase II
promoter		 P
ISS
SpoSPBC14C8.17c
GO:0006473 protein amino acid acetylation P
RCA
SceS000004045
GO:0006730 one-carbon metabolic process P
RCA
SceS000004045
GO:0010590 regulation of cytokinetic cell
separation		 P
IMP
SpoSPBC14C8.17c
GO:0016481 negative regulation of transcription P
RCA
SceS000004045
GO:0016568 chromatin modification P
IDA
SceS000004045
GO:0016569 covalent chromatin modification P
RCA
SceS000004045
GO:0016570 histone modification P
RCA
SceS000004045
GO:0016573 histone acetylation P
IC
SpoSPBC14C8.17c
IDA
SceS000004045
RCA
SceS000004045
GO:0043543 protein amino acid acylation P
RCA
SceS000004045
GO:0045944 positive regulation of transcription from RNA
polymerase II promoter		 P
IMP
SceS000004045
GO:0048096 chromatin-mediated maintenance of
transcription		 P
IC
SpoSPBC14C8.17c
GO:0051276 chromosome organization P
RCA
SceS000004045

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Curated yeast ortholog results:

S. pombe
systematic ID		 S. cerevisiae
systematic ID
SPBC14C8.17c
(O60097)		 YLR055C
(S000004045)


GO terms for curated homolog results:

GO ID GO term GO aspect Evidence codes and associations
GO:0000124 SAGA complex C
IDA
SceS000004045
ISS
SpoSPBC14C8.17c
GO:0000790 nuclear chromatin C
IC
SpoSPBC14C8.17c
GO:0005634 nucleus C
IDA
SceS000004045
SpoSPBC14C8.17c
ISS
SpoSPBC14C8.17c
GO:0005667 transcription factor complex C
RCA
SceS000004045
GO:0005669 transcription factor TFIID complex C
RCA
SceS000004045
GO:0005829 cytosol C
IDA
SpoSPBC14C8.17c
GO:0016591 DNA-directed RNA polymerase II,
holoenzyme		 C
RCA
SceS000004045
GO:0003702 RNA polymerase II transcription factor
activity		 F
RCA
SceS000004045
GO:0003712 transcription cofactor activity F
IMP
SceS000004045
IPI
SceS000004045
ISS
SpoSPBC14C8.17c
GO:0017025 TATA-binding protein binding F
IDA
SceS000004045
IMP
SceS000004045
ISS
SpoSPBC14C8.17c
GO:0000122 negative regulation of transcription from RNA
polymerase II promoter		 P
IDA
SceS000004045
IMP
SceS000004045
GO:0006325 chromatin organization P
RCA
SceS000004045
GO:0006338 chromatin remodeling P
IC
SpoSPBC14C8.17c
GO:0006357 regulation of transcription from RNA polymerase II
promoter		 P
ISS
SpoSPBC14C8.17c
GO:0006473 protein amino acid acetylation P
RCA
SceS000004045
GO:0006730 one-carbon metabolic process P
RCA
SceS000004045
GO:0010590 regulation of cytokinetic cell
separation		 P
IMP
SpoSPBC14C8.17c
GO:0016481 negative regulation of transcription P
RCA
SceS000004045
GO:0016568 chromatin modification P
IDA
SceS000004045
GO:0016569 covalent chromatin modification P
RCA
SceS000004045
GO:0016570 histone modification P
RCA
SceS000004045
GO:0016573 histone acetylation P
IC
SpoSPBC14C8.17c
IDA
SceS000004045
RCA
SceS000004045
GO:0043543 protein amino acid acylation P
RCA
SceS000004045
GO:0045944 positive regulation of transcription from RNA
polymerase II promoter		 P
IMP
SceS000004045
GO:0048096 chromatin-mediated maintenance of
transcription		 P
IC
SpoSPBC14C8.17c
GO:0051276 chromosome organization P
RCA
SceS000004045

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