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Search term: YLR069C


Gene summary:

Species Saccharomyces cerevisiae (Sce)
Primary name MEF1
SGD link S000004059
Alternative ID YLR069C
Description Mitochondrial elongation factor involved in translational elongation
Synonyms YLR069C
Datasets
KOGs
Inparanoid
HomoloGene
OrthoMCL
Curated

Search for gene by ID or name:

Query species:

Include wild-cards:   

Search for GO info:  

GO info in one table:


KOG results:

KOG name Phylogenetic pattern
(and link to KOGs with this pattern)
KOG0465 ACDHYP-

KOGs classification KOGs description
INFORMATION STORAGE AND PROCESSING Mitochondrial elongation factor

Species KOG link NCBI link UniProt link
Arabidopsis thaliana (Ath) At1g45332 GI:15220073
Arabidopsis thaliana (Ath) At1g62750 GI:18407650
Arabidopsis thaliana (Ath) At2g45030 GI:15225397
Caenorhabditis elegans (Cel) CE17928
(WBGene00010270)
GI:17534545 O62278
Caenorhabditis elegans (Cel) CE19822
(WBGene00009246)
GI:17533571 Q9XV52
Drosophila melanogaster (Dme) 7297230 GI:7297230
Homo sapiens (Hsa) Hs18390331
(GFM1)
GI:18390331 Q9H9M0
Homo sapiens (Hsa) Hs22043180 GI:22043180
Saccharomyces cerevisiae (Sce) YJL102w
(S000003638)
GI:6322359 P39677
Saccharomyces cerevisiae (Sce) YLR069c
(S000004059)
GI:6323098 P25039
Schizosaccharomyces pombe (Spo) SPBC1306.01c GI:19112264 Q9USZ1
Schizosaccharomyces pombe (Spo) SPBC660.10 GI:19111881 O94429
Arabidopsis thaliana (Ath) At1g45332 GI:15220073
Arabidopsis thaliana (Ath) At1g62750 GI:18407650
Arabidopsis thaliana (Ath) At2g45030 GI:15225397
Caenorhabditis elegans (Cel) CE17928
(WBGene00010270)
GI:17534545 O62278
Caenorhabditis elegans (Cel) CE19822
(WBGene00009246)
GI:17533571 Q9XV52
Drosophila melanogaster (Dme) 7297230 GI:7297230
Homo sapiens (Hsa) Hs18390331
(GFM1)
GI:18390331 Q9H9M0
Homo sapiens (Hsa) Hs22043180 GI:22043180
Saccharomyces cerevisiae (Sce) YJL102w
(S000003638)
GI:6322359 P39677
Saccharomyces cerevisiae (Sce) YLR069c
(S000004059)
GI:6323098 P25039
Schizosaccharomyces pombe (Spo) SPBC1306.01c GI:19112264 Q9USZ1
Schizosaccharomyces pombe (Spo) SPBC660.10 GI:19111881 O94429
Arabidopsis thaliana (Ath) At1g45332 GI:15220073
Arabidopsis thaliana (Ath) At1g62750 GI:18407650
Arabidopsis thaliana (Ath) At2g45030 GI:15225397
Caenorhabditis elegans (Cel) CE17928
(WBGene00010270)
GI:17534545 O62278
Caenorhabditis elegans (Cel) CE19822
(WBGene00009246)
GI:17533571 Q9XV52
Drosophila melanogaster (Dme) 7297230 GI:7297230
Homo sapiens (Hsa) Hs18390331
(GFM1)
GI:18390331 Q9H9M0
Homo sapiens (Hsa) Hs22043180 GI:22043180
Saccharomyces cerevisiae (Sce) YJL102w
(S000003638)
GI:6322359 P39677
Saccharomyces cerevisiae (Sce) YLR069c
(S000004059)
GI:6323098 P25039
Schizosaccharomyces pombe (Spo) SPBC1306.01c GI:19112264 Q9USZ1
Schizosaccharomyces pombe (Spo) SPBC660.10 GI:19111881 O94429


GO terms for KOG results:

GO ID GO term GO aspect Evidence codes and associations
GO:0005739 mitochondrion C
IDA
AthAt2g45030
At1g62750
At1g45332
SceS000003638
S000004059
SpoSPBC1306.01c
SPBC660.10
IMP
SceS000004059
ISS
SceS000003638
SpoSPBC1306.01c
SPBC660.10
GO:0009507 chloroplast C
IDA
AthAt1g62750
GO:0009570 chloroplast stroma C
IDA
AthAt1g62750
GO:0009941 chloroplast envelope C
IDA
AthAt1g62750
GO:0048046 apoplast C
IDA
AthAt1g62750
GO:0003746 translation elongation factor activity F
IDA
HsaGFM1
ISA
SceS000004059
ISS
AthAt1g62750
At1g45332
At2g45030
SceS000003638
SpoSPBC660.10
SPBC1306.01c
GO:0003924 GTPase activity F
IDA
HsaGFM1
GO:0005524 ATP binding F
IDA
AthAt1g62750
At1g45332
GO:0005525 GTP binding F
ISS
AthAt1g62750
SpoSPBC1306.01c
SPBC660.10
GO:0008135 translation factor activity, nucleic acid
binding
F
ISS
AthAt1g45332
At1g62750
At2g45030
GO:0000003 reproduction P
IMP
CelWBGene00009246
GO:0002119 nematode larval development P
IMP
CelWBGene00009246
GO:0006414 translational elongation P
ISS
SceS000003638
SpoSPBC660.10
SPBC1306.01c
GO:0006898 receptor-mediated endocytosis P
IMP
CelWBGene00009246
GO:0009658 chloroplast organization P
IMP
AthAt1g62750
GO:0009791 post-embryonic development P
IMP
AthAt1g62750
GO:0009792 embryo development ending in birth or egg
hatching
P
IMP
CelWBGene00009246
GO:0009845 seed germination P
IMP
AthAt1g62750
GO:0032543 mitochondrial translation P
IMP
SceS000004059
NAS
SpoSPBC1306.01c
SPBC660.10
GO:0040007 growth P
IMP
CelWBGene00009246
GO:0040010 positive regulation of growth rate P
IMP
CelWBGene00009246
GO:0046686 response to cadmium ion P
IEP
AthAt2g45030
GO:0070125 mitochondrial translational elongation P
IDA
HsaGFM1
ISA
SceS000004059

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HomoloGene results:

HomoloGene cluster Phylogenetic pattern
6449

Species Gene ID NCBI link UniProt link
Homo sapiens (Hsa) GFM1 GI:18390331 Q9H9M0
Pan troglodytes (Ptr) GFM1 GI:114590074
Canis familiaris (Cfa) GFM1 GI:73990760
Mus musculus (Mmu) Gfm1
(MGI:107339)
GI:20070402 Q8K0D5
Rattus norvegicus (Rno) Gfm1 GI:16758432
Gallus gallus (Gga) GFM1 GI:118095339
Drosophila melanogaster (Dme) CG4567
(FBgn0031898)
GI:24582462
Anopheles gambiae (Aga) AgaP_AGAP009737 GI:158298622
Caenorhabditis elegans (Cel) F29C12.4
(CE19822;
WBGene00009246)
GI:17533571 Q9XV52
Saccharomyces cerevisiae (Sce) MEF1
(S000004059)
GI:6323098 P25039
Kluyveromyces lactis (Kla) KLLA0D05467g GI:50306661
Eremothecium gossypii (Ego) AGOS_ABR227C GI:45185459
Magnaporthe grisea (Mgr) MGG_01565 GI:145613524
Neurospora crassa (Ncr) NCU02955.1 GI:32419399
Arabidopsis thaliana (Ath) AT2G45030 GI:15225397
Arabidopsis thaliana (Ath) AT1G45332 GI:15220073
Oryza sativa (Osa) Os03g0565500 GI:115453801
Plasmodium falciparum (Pfa) PFL1590c GI:124806444


GO terms for Homologene results:

GO ID GO term GO aspect Evidence codes and associations
GO:0005739 mitochondrion C
IDA
AthAt2g45030
At1g45332
MmuMGI:107339
SceS000004059
IMP
SceS000004059
ISS
PfaPFL1590c
GO:0003746 translation elongation factor activity F
IDA
HsaGFM1
ISA
SceS000004059
ISS
AthAt1g45332
At2g45030
GO:0003924 GTPase activity F
IDA
HsaGFM1
GO:0005524 ATP binding F
IDA
AthAt1g45332
GO:0008135 translation factor activity, nucleic acid
binding
F
ISS
AthAt1g45332
At2g45030
GO:0000003 reproduction P
IMP
CelWBGene00009246
GO:0002119 nematode larval development P
IMP
CelWBGene00009246
GO:0006898 receptor-mediated endocytosis P
IMP
CelWBGene00009246
GO:0009792 embryo development ending in birth or egg
hatching
P
IMP
CelWBGene00009246
GO:0032543 mitochondrial translation P
IMP
SceS000004059
GO:0040007 growth P
IMP
CelWBGene00009246
GO:0040010 positive regulation of growth rate P
IMP
CelWBGene00009246
GO:0046686 response to cadmium ion P
IEP
AthAt2g45030
GO:0070125 mitochondrial translational elongation P
IDA
HsaGFM1
ISA
SceS000004059

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OrthoMCL results:

Selected databases only

OrthoMCL cluster Phylogenetic pattern
OG1_537

Species OrthoMCL
sequence
Model organism
protein page
UniProt link
Anopheles gambiae (Aga) aga11982 ENSANGP00000010217
Ashbya gossypii (Ago) ago821 ABR227C
Arabidopsis thaliana (Ath) ath3955 At1g45332.1
Arabidopsis thaliana (Ath) ath5464 At1g62750.1
Arabidopsis thaliana (Ath) ath11723 At2g45030.1
Caenorhabditis elegans (Cel) cel7667 F29C12.4
(CE19822;
WBGene00009246)
Candida glabrata (Cgl) cgl1296 CAGL0F01529g
Cryptococcus neoformans (Cne) cne5290 179.m00139
Dictyostelium discoideum (Ddi) ddi1805 DDB0201691
Debaryomyces hansenii (Dha) dha3910 DEHA0E15092g
Drosophila melanogaster (Dme) dme1212 CG4567-PA
(FBgn0031898)
Danio rerio (Dre) dre16520 ENSDARP00000004518
Danio rerio (Dre) dre19411 ENSDARP00000006504
(gfm2)
Q4VBG9
Escherichia coli (Eco) eco3222 16131219
Takifugu rubripes (Fru) fru31038 SINFRUP00000136434
Takifugu rubripes (Fru) fru31039 SINFRUP00000171229
Gallus gallus (Gga) gga23772 ENSGALP00000015672
(GFM1)
Homo sapiens (Hsa) hsa23379 ENSP00000264263
(GFM1)
Q96RP9-2
Kluyveromyces lactis (Kla) kla2303 KLLA0D05467g
Mus musculus (Mmu) mmu16737 ENSMUSP00000076503
(MGI:107339)
Q8K0D5
Neurospora crassa (Ncr) ncr2860 NCU02955.2
Oryza sativa (Osa) osa19705 3376.m00143
Oryza sativa (Osa) osa41193 5253.m00137
Oryza sativa (Osa) osa45569 5503.m00200
Oryza sativa (Osa) osa838 905.m00123
Plasmodium falciparum (Pfa) pfa2988 PFF0115c
Plasmodium falciparum (Pfa) pfa5101 PFL1590c
Rattus norvegicus (Rno) rno16175 ENSRNOP00000017608
(RGD:631396)
Rattus norvegicus (Rno) rno16174 ENSRNOP00000040081
(RGD:631396)
Q07803
Rattus norvegicus (Rno) rno16176 ENSRNOP00000043099
Saccharomyces cerevisiae (Sce) sce4150 YLR069C
(S000004059)
Schizosaccharomyces pombe (Spo) spo3773 SPBC1306.01c Q9USZ1
Yarrowia lipolytica (Yli) yli3010 YALI0D07326g


GO terms for OrthoMCL results:

GO ID GO term GO aspect Evidence codes and associations
GO:0005739 mitochondrion C
IDA
AthAt2g45030
At1g62750
At1g45332
MmuMGI:107339
SceS000004059
SpoSPBC1306.01c
IMP
SceS000004059
ISS
PfaPFL1590c
SpoSPBC1306.01c
GO:0009507 chloroplast C
IDA
AthAt1g62750
GO:0009570 chloroplast stroma C
IDA
AthAt1g62750
GO:0009941 chloroplast envelope C
IDA
AthAt1g62750
GO:0020011 apicoplast C
IDA
PfaPFF0115c
GO:0048046 apoplast C
IDA
AthAt1g62750
GO:0003746 translation elongation factor activity F
ISA
SceS000004059
ISS
AthAt1g62750
At1g45332
At2g45030
PfaPFF0115c
SpoSPBC1306.01c
GO:0005524 ATP binding F
IDA
AthAt1g62750
At1g45332
GO:0005525 GTP binding F
ISS
AthAt1g62750
SpoSPBC1306.01c
GO:0008135 translation factor activity, nucleic acid
binding
F
ISS
AthAt1g45332
At1g62750
At2g45030
GO:0000003 reproduction P
IMP
CelWBGene00009246
GO:0002119 nematode larval development P
IMP
CelWBGene00009246
GO:0006414 translational elongation P
ISS
PfaPFF0115c
SpoSPBC1306.01c
GO:0006898 receptor-mediated endocytosis P
IMP
CelWBGene00009246
GO:0009658 chloroplast organization P
IMP
AthAt1g62750
GO:0009791 post-embryonic development P
IMP
AthAt1g62750
GO:0009792 embryo development ending in birth or egg
hatching
P
IMP
CelWBGene00009246
GO:0009845 seed germination P
IMP
AthAt1g62750
GO:0032543 mitochondrial translation P
IMP
SceS000004059
NAS
SpoSPBC1306.01c
GO:0040007 growth P
IMP
CelWBGene00009246
GO:0040010 positive regulation of growth rate P
IMP
CelWBGene00009246
GO:0046686 response to cadmium ion P
IEP
AthAt2g45030
GO:0070125 mitochondrial translational elongation P
ISA
SceS000004059

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Curated yeast ortholog results:

S. pombe
systematic ID
S. cerevisiae
systematic ID
SPBC1306.01c
(Q9USZ1)
YLR069C
(S000004059)


GO terms for curated homolog results:

GO ID GO term GO aspect Evidence codes and associations
GO:0005739 mitochondrion C
IDA
SceS000004059
SpoSPBC1306.01c
IMP
SceS000004059
ISS
SpoSPBC1306.01c
GO:0003746 translation elongation factor activity F
ISA
SceS000004059
ISS
SpoSPBC1306.01c
GO:0005525 GTP binding F
ISS
SpoSPBC1306.01c
GO:0006414 translational elongation P
ISS
SpoSPBC1306.01c
GO:0032543 mitochondrial translation P
IMP
SceS000004059
NAS
SpoSPBC1306.01c
GO:0070125 mitochondrial translational elongation P
ISA
SceS000004059

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Search for GO info:  

GO info in one table:

s.khadayate@ucl.ac.uk