YOGY Home YOGY Help

Search term: YLR071C


Gene summary:

Species Saccharomyces cerevisiae (Sce)
Primary name RGR1
SGD link S000004061
Alternative ID YLR071C
Description Subunit of the RNA polymerase II mediator complex; associates with core polymerase subunits to form the RNA polymerase II holoenzyme; required for glucose repression, HO repression, RME1 repression and sporulation
Synonyms YLR071C
Datasets
KOGs
Inparanoid
HomoloGene
OrthoMCL
Curated

Search for gene by ID or name:

Query species:

Include wild-cards:   

Search for GO info:  

GO info in one table:


KOG results:

KOG name Phylogenetic pattern
(and link to KOGs with this pattern)
KOG1875 ACDHYP-

KOGs classification KOGs description
INFORMATION STORAGE AND PROCESSING Thyroid hormone receptor-associated coactivator complex component (TRAP170)

Species KOG link NCBI link UniProt link
Arabidopsis thaliana (Ath) At3g04740 GI:15229344
Caenorhabditis elegans (Cel) CE20550 GI:17554738
Caenorhabditis elegans (Cel) CE20551 GI:17554736
Drosophila melanogaster (Dme) 7291979 GI:7291979
Homo sapiens (Hsa) Hs4758102 GI:4758102
Saccharomyces cerevisiae (Sce) YLR071c
(S000004061)
GI:6323100 P19263
Schizosaccharomyces pombe (Spo) SPBC1A4.10c GI:19112605 Q9P7Y4


GO terms for KOG results:

GO ID GO term GO aspect Evidence codes and associations
GO:0005634 nucleus C
IDA
SpoSPBC1A4.10c
GO:0005829 cytosol C
IDA
SpoSPBC1A4.10c
GO:0016592 mediator complex C
IDA
SceS000004061
SpoSPBC1A4.10c
ISS
AthAt3g04740
NAS
SpoSPBC1A4.10c
GO:0016455 RNA polymerase II transcription mediator
activity
F
IDA
SceS000004061
GO:0006366 transcription from RNA polymerase II
promoter
P
IC
SpoSPBC1A4.10c
IDA
SceS000004061
GO:0008284 positive regulation of cell proliferation P
IMP
AthAt3g04740
GO:0009415 response to water P
RCA
SceS000004061
GO:0032569 gene-specific transcription from RNA polymerase II
promoter
P
IC
SpoSPBC1A4.10c
GO:0045941 positive regulation of transcription P
ISS
AthAt3g04740

Back to the top

HomoloGene results:

HomoloGene cluster Phylogenetic pattern
39672

Species Gene ID NCBI link UniProt link
Saccharomyces cerevisiae (Sce) RGR1
(S000004061)
GI:6323100 P19263
Kluyveromyces lactis (Kla) KLLA0D05533g GI:50306667
Eremothecium gossypii (Ego) AGOS_ABR230C GI:45185462


GO terms for Homologene results:

GO ID GO term GO aspect Evidence codes and associations
GO:0016592 mediator complex C
IDA
SceS000004061
GO:0016455 RNA polymerase II transcription mediator
activity
F
IDA
SceS000004061
GO:0006366 transcription from RNA polymerase II
promoter
P
IDA
SceS000004061
GO:0009415 response to water P
RCA
SceS000004061

Back to the top

OrthoMCL results:

Selected databases only

OrthoMCL cluster Phylogenetic pattern
OG1_15129

Species OrthoMCL
sequence
Model organism
protein page
UniProt link
Ashbya gossypii (Ago) ago824 ABR230C
Candida glabrata (Cgl) cgl4647 CAGL0L13112g
Debaryomyces hansenii (Dha) dha3839 DEHA0E13530g
Danio rerio (Dre) dre23767 ENSDARP00000027601
Kluyveromyces lactis (Kla) kla2306 KLLA0D05533g
Neurospora crassa (Ncr) ncr8880 NCU09112.2
Saccharomyces cerevisiae (Sce) sce4152 YLR071C
(S000004061)
Yarrowia lipolytica (Yli) yli3004 YALI0D07194g


GO terms for OrthoMCL results:

GO ID GO term GO aspect Evidence codes and associations
GO:0016592 mediator complex C
IDA
SceS000004061
GO:0016455 RNA polymerase II transcription mediator
activity
F
IDA
SceS000004061
GO:0006366 transcription from RNA polymerase II
promoter
P
IDA
SceS000004061
GO:0009415 response to water P
RCA
SceS000004061

Back to the top

Curated yeast ortholog results:

S. pombe
systematic ID
S. cerevisiae
systematic ID
SPBC1A4.10c
(Q9P7Y4)
YLR071C
(S000004061)


GO terms for curated homolog results:

GO ID GO term GO aspect Evidence codes and associations
GO:0005634 nucleus C
IDA
SpoSPBC1A4.10c
GO:0005829 cytosol C
IDA
SpoSPBC1A4.10c
GO:0016592 mediator complex C
IDA
SceS000004061
SpoSPBC1A4.10c
NAS
SpoSPBC1A4.10c
GO:0016455 RNA polymerase II transcription mediator
activity
F
IDA
SceS000004061
GO:0006366 transcription from RNA polymerase II
promoter
P
IC
SpoSPBC1A4.10c
IDA
SceS000004061
GO:0009415 response to water P
RCA
SceS000004061
GO:0032569 gene-specific transcription from RNA polymerase II
promoter
P
IC
SpoSPBC1A4.10c

Back to the top
YOGY Home YOGY Help

Search for gene by ID or name:

Query species:

Include wild-cards:   

Search for GO info:  

GO info in one table:

s.khadayate@ucl.ac.uk