YOGY Home YOGY Help

Search term: YLR085C

Gene summary:

Species Saccharomyces cerevisiae (Sce)
Primary name ARP6
SGD link S000004075
Alternative ID YLR085C
Description Actin-related protein that binds nucleosomes; a component of the SWR1 complex, which exchanges histone variant H2AZ (Htz1p) for chromatin-bound histone H2A
Synonyms YLR085C
Datasets
KOGs
Inparanoid
HomoloGene
OrthoMCL
Curated

Search for gene by ID or name:

Query species:

Include wild-cards:   

Search for GO info:  

GO info in one table:

KOG results:

KOG name Phylogenetic pattern
(and link to KOGs with this pattern)
KOG0680 -CDHYP-

KOGs classification KOGs description
CELLULAR PROCESSES AND SIGNALING Actin-related protein - Arp6p

Species KOG link NCBI link UniProt link
Caenorhabditis elegans (Cel) CE24792 GI:17531615
Drosophila melanogaster (Dme) 7293115
(FBgn0011741)		 GI:17737347
Homo sapiens (Hsa) Hs11968057
(ACTR6)		 GI:11968057 Q9P0A0
Saccharomyces cerevisiae (Sce) YLR085c
(S000004075)		 GI:6323114 Q12509
Schizosaccharomyces pombe (Spo) SPCC550.12 GI:19075604 O94241
Caenorhabditis elegans (Cel) CE24792 GI:17531615
Drosophila melanogaster (Dme) 7293115
(FBgn0011741)		 GI:17737347
Homo sapiens (Hsa) Hs11968057
(ACTR6)		 GI:11968057 Q9P0A0
Saccharomyces cerevisiae (Sce) YLR085c
(S000004075)		 GI:6323114 Q12509
Schizosaccharomyces pombe (Spo) SPCC550.12 GI:19075604 O94241


GO terms for KOG results:

GO ID GO term GO aspect Evidence codes and associations
GO:0000784 nuclear chromosome, telomeric region C
IDA
SpoSPCC550.12
GO:0000812 Swr1 complex C
IDA
SceS000004075
SpoSPCC550.12
GO:0005634 nucleus C
IDA
SpoSPCC550.12
GO:0005737 cytoplasm C
IDA
SceS000004075
GO:0005829 cytosol C
IDA
SpoSPCC550.12
GO:0005884 actin filament C
ISS
DmeFBgn0011741
NAS
DmeFBgn0011741
GO:0003674 molecular_function F
ND
SpoSPCC550.12
GO:0004003 ATP-dependent DNA helicase activity F
RCA
SceS000004075
GO:0005200 structural constituent of cytoskeleton F
ISS
DmeFBgn0011741
GO:0008094 DNA-dependent ATPase activity F
RCA
SceS000004075
GO:0016887 ATPase activity F
RCA
SceS000004075
GO:0031491 nucleosome binding F
IMP
SceS000004075
GO:0042623 ATPase activity, coupled F
RCA
SceS000004075
GO:0043138 3'-5' DNA helicase activity F
RCA
SceS000004075
GO:0006338 chromatin remodeling P
IDA
SceS000004075
IGI
SceS000004075
IMP
SceS000004075
IPI
SpoSPCC550.12
GO:0006348 chromatin silencing at telomere P
IMP
SpoSPCC550.12
GO:0007010 cytoskeleton organization P
ISS
DmeFBgn0011741
GO:0043486 histone exchange P
IMP
SceS000004075
IPI
SpoSPCC550.12

Back to the top

HomoloGene results:

HomoloGene cluster Phylogenetic pattern
6451

Species Gene ID NCBI link UniProt link
Homo sapiens (Hsa) ACTR6 GI:11968057 Q9P0A0
Canis familiaris (Cfa) ACTR6 GI:73977684
Mus musculus (Mmu) Actr6
(MGI:1914269)		 GI:21313172 Q9D864
Rattus norvegicus (Rno) Actr6 GI:109480431
Gallus gallus (Gga) ACTR6 GI:45382865
Drosophila melanogaster (Dme) Actr13E
(FBgn0011741)		 GI:17737347
Anopheles gambiae (Aga) AgaP_AGAP005857 GI:158294889
Caenorhabditis elegans (Cel) actin GI:71981267
Schizosaccharomyces pombe (Spo) arp6
(SPCC550.12)		 GI:19075604 O94241
Saccharomyces cerevisiae (Sce) ARP6
(S000004075)		 GI:6323114 Q12509
Kluyveromyces lactis (Kla) KLLA0F19063g GI:50311809
Eremothecium gossypii (Ego) AGOS_AGR091W GI:45201186
Magnaporthe grisea (Mgr) MGG_05587 GI:39941352
Neurospora crassa (Ncr) NCU05587.1 GI:32409923
Arabidopsis thaliana (Ath) ATARP6 GI:18406999
Oryza sativa (Osa) Os01g0269900 GI:115435884


GO terms for Homologene results:

GO ID GO term GO aspect Evidence codes and associations
GO:0000784 nuclear chromosome, telomeric region C
IDA
SpoSPCC550.12
GO:0000812 Swr1 complex C
IDA
SceS000004075
SpoSPCC550.12
GO:0005575 cellular_component C
ND
MmuMGI:1914269
GO:0005634 nucleus C
IDA
AthATARP6
SpoSPCC550.12
TAS
AthATARP6
GO:0005737 cytoplasm C
IDA
SceS000004075
GO:0005829 cytosol C
IDA
SpoSPCC550.12
GO:0005884 actin filament C
ISS
DmeFBgn0011741
NAS
DmeFBgn0011741
GO:0016585 chromatin remodeling complex C
IMP
AthATARP6
GO:0003674 molecular_function F
ND
MmuMGI:1914269
SpoSPCC550.12
GO:0004003 ATP-dependent DNA helicase activity F
RCA
SceS000004075
GO:0005200 structural constituent of cytoskeleton F
ISS
AthATARP6
DmeFBgn0011741
GO:0008094 DNA-dependent ATPase activity F
RCA
SceS000004075
GO:0016887 ATPase activity F
RCA
SceS000004075
GO:0031491 nucleosome binding F
IMP
SceS000004075
GO:0042623 ATPase activity, coupled F
RCA
SceS000004075
GO:0043138 3'-5' DNA helicase activity F
RCA
SceS000004075
GO:0006338 chromatin remodeling P
IDA
SceS000004075
IGI
SceS000004075
IMP
AthATARP6
SceS000004075
IPI
SpoSPCC550.12
GO:0006348 chromatin silencing at telomere P
IMP
SpoSPCC550.12
GO:0006355 regulation of transcription, DNA-dependent P
IMP
AthATARP6
GO:0007010 cytoskeleton organization P
ISS
DmeFBgn0011741
GO:0008150 biological_process P
ND
MmuMGI:1914269
GO:0008283 cell proliferation P
IMP
AthATARP6
GO:0009266 response to temperature stimulus P
IMP
AthATARP6
GO:0009910 negative regulation of flower development P
IMP
AthATARP6
TAS
AthATARP6
GO:0030029 actin filament-based process P
TAS
AthATARP6
GO:0043486 histone exchange P
IMP
SceS000004075
IPI
SpoSPCC550.12

Back to the top

OrthoMCL results:

Selected databases only

OrthoMCL cluster Phylogenetic pattern
OG1_4028

Species OrthoMCL
sequence		 Model organism
protein page		 UniProt link
Anopheles gambiae (Aga) aga1300 ENSANGP00000017375
Ashbya gossypii (Ago) ago4401 AGR091W
Arabidopsis thaliana (Ath) ath15492 At3g33520.1
Caenorhabditis elegans (Cel) cel1475 C08B11.6
(CE30856;
WBGene00007434)
Candida glabrata (Cgl) cgl4605 CAGL0L12166g
Cryptococcus neoformans (Cne) cne3850 185.m02435
Dictyostelium discoideum (Ddi) ddi9377 DDB0187231
Debaryomyces hansenii (Dha) dha4597 DEHA0F04686g
Drosophila melanogaster (Dme) dme17988 CG11678-PA
(FBgn0011741)
Danio rerio (Dre) dre16682 ENSDARP00000005947
(actr6)		 Q7ZV86
Takifugu rubripes (Fru) fru21751 SINFRUP00000154808
Gallus gallus (Gga) gga671 ENSGALP00000018828
(ACTR6)		 Q9DEE9
Homo sapiens (Hsa) hsa8045 ENSP00000188312
(ACTR6)		 Q9GZN1
Kluyveromyces lactis (Kla) kla4935 KLLA0F19063g
Mus musculus (Mmu) mmu2713 ENSMUSP00000020109
(MGI:1914269)		 Q9D864
Neurospora crassa (Ncr) ncr5428 NCU05587.2
Oryza sativa (Osa) osa9362 2730.m00149
Rattus norvegicus (Rno) rno26613 ENSRNOP00000010414
(RGD:1304609)		 B2RYQ1
Saccharomyces cerevisiae (Sce) sce4166 YLR085C
(S000004075)
Schizosaccharomyces pombe (Spo) spo4368 SPCC550.12 O94241
Yarrowia lipolytica (Yli) yli3264 YALI0D13178g


GO terms for OrthoMCL results:

GO ID GO term GO aspect Evidence codes and associations
GO:0000784 nuclear chromosome, telomeric region C
IDA
SpoSPCC550.12
GO:0000812 Swr1 complex C
IDA
SceS000004075
SpoSPCC550.12
GO:0005575 cellular_component C
ND
MmuMGI:1914269
GO:0005634 nucleus C
IDA
AthAt3g33520
SpoSPCC550.12
TAS
AthAt3g33520
GO:0005737 cytoplasm C
IDA
SceS000004075
GO:0005829 cytosol C
IDA
SpoSPCC550.12
GO:0005884 actin filament C
ISS
DmeFBgn0011741
NAS
DmeFBgn0011741
GO:0016585 chromatin remodeling complex C
IMP
AthAt3g33520
GO:0003674 molecular_function F
ND
MmuMGI:1914269
SpoSPCC550.12
GO:0004003 ATP-dependent DNA helicase activity F
RCA
SceS000004075
GO:0005200 structural constituent of cytoskeleton F
ISS
AthAt3g33520
DmeFBgn0011741
GO:0008094 DNA-dependent ATPase activity F
RCA
SceS000004075
GO:0016887 ATPase activity F
RCA
SceS000004075
GO:0031491 nucleosome binding F
IMP
SceS000004075
GO:0042623 ATPase activity, coupled F
RCA
SceS000004075
GO:0043138 3'-5' DNA helicase activity F
RCA
SceS000004075
GO:0006338 chromatin remodeling P
IDA
SceS000004075
IGI
SceS000004075
IMP
AthAt3g33520
SceS000004075
IPI
SpoSPCC550.12
GO:0006348 chromatin silencing at telomere P
IMP
SpoSPCC550.12
GO:0006355 regulation of transcription, DNA-dependent P
IMP
AthAt3g33520
GO:0007010 cytoskeleton organization P
ISS
DmeFBgn0011741
GO:0007126 meiosis P
IMP
CelWBGene00007434
GO:0008150 biological_process P
ND
MmuMGI:1914269
GO:0008283 cell proliferation P
IMP
AthAt3g33520
GO:0009266 response to temperature stimulus P
IMP
AthAt3g33520
GO:0009792 embryo development ending in birth or egg
hatching		 P
IMP
CelWBGene00007434
GO:0009910 negative regulation of flower development P
IMP
AthAt3g33520
TAS
AthAt3g33520
GO:0010171 body morphogenesis P
IMP
CelWBGene00007434
GO:0030029 actin filament-based process P
TAS
AthAt3g33520
GO:0043486 histone exchange P
IMP
SceS000004075
IPI
SpoSPCC550.12
GO:0045132 meiotic chromosome segregation P
IMP
CelWBGene00007434

Back to the top

Curated yeast ortholog results:

S. pombe
systematic ID		 S. cerevisiae
systematic ID
SPCC550.12
(O94241)		 YLR085C
(S000004075)