YOGY Home YOGY Help

Search term: YLR089C

Gene summary:

Species Saccharomyces cerevisiae (Sce)
Primary name ALT1
SGD link S000004079
Alternative ID YLR089C
Description Alanine transaminase (glutamic pyruvic transaminase); involved in alanine biosynthetic and catabolic processes; the authentic, non-tagged protein is detected in highly purified mitochondria in high-throughput studies
Synonyms YLR089C
Datasets
KOGs
Inparanoid
HomoloGene
OrthoMCL
Curated

Search for gene by ID or name:

Query species:

Include wild-cards:   

Search for GO info:  

GO info in one table:

KOG results:

KOG name Phylogenetic pattern
(and link to KOGs with this pattern)
KOG0258 ACDHYP-

KOGs classification KOGs description
METABOLISM Alanine aminotransferase

Species KOG link NCBI link UniProt link
Arabidopsis thaliana (Ath) At1g17290 GI:15220082
Arabidopsis thaliana (Ath) At1g17300 GI:15220083
Arabidopsis thaliana (Ath) At1g23310 GI:9295709
Arabidopsis thaliana (Ath) At1g70580 GI:15223186
Arabidopsis thaliana (Ath) At1g72330 GI:9082268
Arabidopsis thaliana (Ath) At2g28820 GI:15226970
Caenorhabditis elegans (Cel) CE08545 GI:17505819
Drosophila melanogaster (Dme) 7292870 GI:7292870
Homo sapiens (Hsa) Hs19263340
(GPT2)		 GI:19263340 Q8TD30
Homo sapiens (Hsa) Hs4885351
(GPT)		 GI:4885351 P24298
Saccharomyces cerevisiae (Sce) YDR111c
(S000002518)		 GI:6320317 P52892
Saccharomyces cerevisiae (Sce) YLR089c
(S000004079)		 GI:6323118 P52893
Schizosaccharomyces pombe (Spo) SPBC582.08 GI:19111968 Q10334
Arabidopsis thaliana (Ath) At1g17290 GI:15220082
Arabidopsis thaliana (Ath) At1g17300 GI:15220083
Arabidopsis thaliana (Ath) At1g23310 GI:9295709
Arabidopsis thaliana (Ath) At1g70580 GI:15223186
Arabidopsis thaliana (Ath) At1g72330 GI:9082268
Arabidopsis thaliana (Ath) At2g28820 GI:15226970
Caenorhabditis elegans (Cel) CE08545 GI:17505819
Drosophila melanogaster (Dme) 7292870 GI:7292870
Homo sapiens (Hsa) Hs19263340
(GPT2)		 GI:19263340 Q8TD30
Homo sapiens (Hsa) Hs4885351
(GPT)		 GI:4885351 P24298
Saccharomyces cerevisiae (Sce) YDR111c
(S000002518)		 GI:6320317 P52892
Saccharomyces cerevisiae (Sce) YLR089c
(S000004079)		 GI:6323118 P52893
Schizosaccharomyces pombe (Spo) SPBC582.08 GI:19111968 Q10334
Arabidopsis thaliana (Ath) At1g17290 GI:15220082
Arabidopsis thaliana (Ath) At1g17300 GI:15220083
Arabidopsis thaliana (Ath) At1g23310 GI:9295709
Arabidopsis thaliana (Ath) At1g70580 GI:15223186
Arabidopsis thaliana (Ath) At1g72330 GI:9082268
Arabidopsis thaliana (Ath) At2g28820 GI:15226970
Caenorhabditis elegans (Cel) CE08545 GI:17505819
Drosophila melanogaster (Dme) 7292870 GI:7292870
Homo sapiens (Hsa) Hs19263340
(GPT2)		 GI:19263340 Q8TD30
Homo sapiens (Hsa) Hs4885351
(GPT)		 GI:4885351 P24298
Saccharomyces cerevisiae (Sce) YDR111c
(S000002518)		 GI:6320317 P52892
Saccharomyces cerevisiae (Sce) YLR089c
(S000004079)		 GI:6323118 P52893
Schizosaccharomyces pombe (Spo) SPBC582.08 GI:19111968 Q10334


GO terms for KOG results:

GO ID GO term GO aspect Evidence codes and associations
GO:0005575 cellular_component C
ND
AthAt1g17300
GO:0005634 nucleus C
IDA
SceS000002518
SpoSPBC582.08
ISS
SpoSPBC582.08
GO:0005737 cytoplasm C
IDA
SceS000002518
ISS
SpoSPBC582.08
NAS
HsaGPT
GO:0005739 mitochondrion C
IDA
AthAt1g17290
At1g72330
SceS000004079
ISS
SpoSPBC582.08
GO:0005773 vacuole C
IDA
AthAt1g23310
GO:0005777 peroxisome C
IDA
AthAt1g23310
At1g70580
ISS
AthAt1g70580
GO:0005829 cytosol C
IDA
SpoSPBC582.08
GO:0009507 chloroplast C
IDA
AthAt1g70580
At1g23310
At1g17290
GO:0009570 chloroplast stroma C
IDA
AthAt1g70580
GO:0016020 membrane C
IDA
AthAt1g23310
GO:0048046 apoplast C
IDA
AthAt1g23310
GO:0003674 molecular_function F
ND
AthAt1g17300
GO:0004021 L-alanine:2-oxoglutarate aminotransferase
activity		 F
IDA
AthAt1g23310
At1g17290
At1g70580
HsaGPT2
IMP
AthAt1g23310
SceS000004079
ISS
AthAt1g70580
At1g17290
At1g72330
SpoSPBC582.08
NAS
HsaGPT
GO:0005507 copper ion binding F
IDA
AthAt1g72330
GO:0005524 ATP binding F
IDA
AthAt1g72330
At1g17290
GO:0008453 alanine-glyoxylate transaminase
activity		 F
IDA
AthAt1g70580
At1g23310
GO:0008483 transaminase activity F
ISS
SceS000002518
GO:0047958 glycine:2-oxoglutarate aminotransferase
activity		 F
IDA
AthAt1g70580
At1g23310
IMP
AthAt1g23310
ISS
AthAt1g70580
GO:0001666 response to hypoxia P
IEP
AthAt1g17290
GO:0006094 gluconeogenesis P
NAS
HsaGPT
GO:0006103 2-oxoglutarate metabolic process P
IDA
HsaGPT2
GO:0006523 alanine biosynthetic process P
IMP
SceS000004079
GO:0006524 alanine catabolic process P
IMP
SceS000004079
GO:0006537 glutamate biosynthetic process P
IC
SpoSPBC582.08
GO:0006807 nitrogen compound metabolic process P
NAS
HsaGPT
GO:0008150 biological_process P
ND
AthAt1g17300
SceS000002518
GO:0009853 photorespiration P
IMP
AthAt1g23310
ISS
AthAt1g70580
TAS
AthAt1g23310
GO:0019481 L-alanine catabolic process, by
transamination		 P
IMP
AthAt1g17290
GO:0042851 L-alanine metabolic process P
IDA
HsaGPT2
ISS
SpoSPBC582.08
GO:0046686 response to cadmium ion P
IEP
AthAt1g17290

Back to the top

HomoloGene results:

HomoloGene cluster Phylogenetic pattern
91040

Species Gene ID NCBI link UniProt link
Homo sapiens (Hsa) GPT GI:4885351 P24298
Canis familiaris (Cfa) LOC609914 GI:73974898
Mus musculus (Mmu) Gpt
(MGI:95802)		 GI:33413404 Q566C3
Rattus norvegicus (Rno) Gpt GI:13591961
Schizosaccharomyces pombe (Spo) SPBC582.08 GI:19111968 Q10334
Saccharomyces cerevisiae (Sce) ALT1
(S000004079)		 GI:6323118 P52893
Kluyveromyces lactis (Kla) KLLA0F19162g GI:50311819
Magnaporthe grisea (Mgr) MGG_06503 GI:145608620
Neurospora crassa (Ncr) NCU03973.1 GI:32405358
Arabidopsis thaliana (Ath) ALAAT2 GI:30698866
Arabidopsis thaliana (Ath) AlaAT1 GI:42562119
Oryza sativa (Osa) Os10g0390500 GI:115481822


GO terms for Homologene results:

GO ID GO term GO aspect Evidence codes and associations
GO:0005634 nucleus C
IDA
SpoSPBC582.08
ISS
SpoSPBC582.08
GO:0005737 cytoplasm C
ISS
SpoSPBC582.08
NAS
HsaGPT
GO:0005739 mitochondrion C
IDA
AthALAAT2
AlaAT1
SceS000004079
ISS
SpoSPBC582.08
GO:0005829 cytosol C
IDA
SpoSPBC582.08
GO:0009507 chloroplast C
IDA
AthAlaAT1
GO:0004021 L-alanine:2-oxoglutarate aminotransferase
activity		 F
IDA
AthAlaAT1
IMP
SceS000004079
ISS
AthAlaAT1
ALAAT2
SpoSPBC582.08
NAS
HsaGPT
GO:0005507 copper ion binding F
IDA
AthALAAT2
GO:0005524 ATP binding F
IDA
AthAlaAT1
ALAAT2
GO:0001666 response to hypoxia P
IEP
AthAlaAT1
GO:0006094 gluconeogenesis P
NAS
HsaGPT
GO:0006523 alanine biosynthetic process P
IMP
SceS000004079
GO:0006524 alanine catabolic process P
IMP
SceS000004079
GO:0006537 glutamate biosynthetic process P
IC
SpoSPBC582.08
GO:0006807 nitrogen compound metabolic process P
NAS
HsaGPT
GO:0019481 L-alanine catabolic process, by
transamination		 P
IMP
AthAlaAT1
GO:0042851 L-alanine metabolic process P
ISS
SpoSPBC582.08
GO:0046686 response to cadmium ion P
IEP
AthAlaAT1

Back to the top

OrthoMCL results:

Selected databases only

OrthoMCL cluster Phylogenetic pattern
OG1_1052

Species OrthoMCL
sequence		 Model organism
protein page		 UniProt link
Anopheles gambiae (Aga) aga15590 ENSANGP00000017843
Ashbya gossypii (Ago) ago4395 AGR085W
Arabidopsis thaliana (Ath) ath1849 At1g17290.1
Arabidopsis thaliana (Ath) ath2508 At1g23310.1
Arabidopsis thaliana (Ath) ath6338 At1g70580.1
Arabidopsis thaliana (Ath) ath6339 At1g70580.2
Arabidopsis thaliana (Ath) ath6521 At1g72330.1
Caenorhabditis elegans (Cel) cel3222 C32F10.8a
(CE32815;
WBGene00016333)
Candida glabrata (Cgl) cgl4609 CAGL0L12254g
Cryptococcus neoformans (Cne) cne4241 177.m02998
Dictyostelium discoideum (Ddi) ddi7817 DDB0186738
Debaryomyces hansenii (Dha) dha1054 DEHA0B08393g
Drosophila melanogaster (Dme) dme17694 CG1640-PA
(FBgn0030478)
Drosophila melanogaster (Dme) dme17690 CG1640-PB
(FBgn0030478)
Drosophila melanogaster (Dme) dme17691 CG1640-PC
(FBgn0030478)
Drosophila melanogaster (Dme) dme17692 CG1640-PD
(FBgn0030478)
Drosophila melanogaster (Dme) dme17693 CG1640-PE
(FBgn0030478)
Drosophila melanogaster (Dme) dme17695 CG1640-PF
(FBgn0030478)
Danio rerio (Dre) dre3433 ENSDARP00000013906
Takifugu rubripes (Fru) fru2501 SINFRUP00000127859
Takifugu rubripes (Fru) fru16452 SINFRUP00000140769
Gallus gallus (Gga) gga4614 ENSGALP00000006600
(GPT2)
Homo sapiens (Hsa) hsa30910 ENSP00000301330
Homo sapiens (Hsa) hsa12141 ENSP00000345282
(GPT2)		 Q8TD30-1
Homo sapiens (Hsa) hsa30909 ENSP00000346821
(GPT)		 B4E1C6
Kluyveromyces lactis (Kla) kla4940 KLLA0F19162g
Mus musculus (Mmu) mmu9208 ENSMUSP00000023203
(MGI:95802)		 Q8QZR5
Mus musculus (Mmu) mmu26367 ENSMUSP00000034136
(MGI:1915391)		 Q8BGT5
Neurospora crassa (Ncr) ncr3860 NCU03973.2
Oryza sativa (Osa) osa18409 3339.m00122
Oryza sativa (Osa) osa32855 4477.m00094
Oryza sativa (Osa) osa51546 5979.m00131
Oryza sativa (Osa) osa56407 6190.m00129
Oryza sativa (Osa) osa58233 6256.m00163
Rattus norvegicus (Rno) rno14681 ENSRNOP00000022851
(RGD:1305462)		 Q7TP13
Rattus norvegicus (Rno) rno27312 ENSRNOP00000044411
(RGD:621720)		 P25409
Saccharomyces cerevisiae (Sce) sce1148 YDR111C
(S000002518)
Saccharomyces cerevisiae (Sce) sce4170 YLR089C
(S000004079)
Schizosaccharomyces pombe (Spo) spo4491 SPBC582.08 Q10334
Yarrowia lipolytica (Yli) yli2964 YALI0D06325g


GO terms for OrthoMCL results:

GO ID GO term GO aspect Evidence codes and associations
GO:0005634 nucleus C
IDA
SceS000002518
SpoSPBC582.08
ISS
SpoSPBC582.08
GO:0005737 cytoplasm C
IDA
SceS000002518
ISS
SpoSPBC582.08
GO:0005739 mitochondrion C
IDA
AthAt1g17290
At1g72330
MmuMGI:1915391
SceS000004079
ISS
SpoSPBC582.08
GO:0005773 vacuole C
IDA
AthAt1g23310
GO:0005777 peroxisome C
IDA
AthAt1g23310
At1g70580
ISS
AthAt1g70580
GO:0005829 cytosol C
IDA
SpoSPBC582.08
GO:0009507 chloroplast C
IDA
AthAt1g70580
At1g23310
At1g17290
GO:0009570 chloroplast stroma C
IDA
AthAt1g70580
GO:0016020 membrane C
IDA
AthAt1g23310
GO:0048046 apoplast C
IDA
AthAt1g23310
GO:0004021 L-alanine:2-oxoglutarate aminotransferase
activity		 F
IDA
AthAt1g23310
At1g17290
At1g70580
IMP
AthAt1g23310
SceS000004079
ISS
AthAt1g70580
At1g17290
At1g72330
DmeFBgn0030478
SpoSPBC582.08
GO:0005507 copper ion binding F
IDA
AthAt1g72330
GO:0005524 ATP binding F
IDA
AthAt1g72330
At1g17290
GO:0008453 alanine-glyoxylate transaminase
activity		 F
IDA
AthAt1g70580
At1g23310
GO:0008483 transaminase activity F
ISS
SceS000002518
GO:0047958 glycine:2-oxoglutarate aminotransferase
activity		 F
IDA
AthAt1g70580
At1g23310
IMP
AthAt1g23310
ISS
AthAt1g70580
GO:0000003 reproduction P
IMP
CelWBGene00016333
GO:0001666 response to hypoxia P
IEP
AthAt1g17290
GO:0006523 alanine biosynthetic process P
IMP
SceS000004079
GO:0006524 alanine catabolic process P
IMP
SceS000004079
GO:0006537 glutamate biosynthetic process P
IC
SpoSPBC582.08
GO:0008150 biological_process P
ND
SceS000002518
GO:0009853 photorespiration P
IMP
AthAt1g23310
ISS
AthAt1g70580
TAS
AthAt1g23310
GO:0019481 L-alanine catabolic process, by
transamination		 P
IMP
AthAt1g17290
GO:0042851 L-alanine metabolic process P
ISS
SpoSPBC582.08
GO:0046686 response to cadmium ion P
IEP
AthAt1g17290

Back to the top

Curated yeast ortholog results:

S. pombe
systematic ID		 S. cerevisiae
systematic ID
SPBC582.08
(Q10334)		 YLR089C
(S000004079)


GO terms for curated homolog results:

GO ID GO term GO aspect Evidence codes and associations
GO:0005634 nucleus C
IDA
SpoSPBC582.08
ISS
SpoSPBC582.08
GO:0005737 cytoplasm C
ISS
SpoSPBC582.08
GO:0005739 mitochondrion C
IDA
SceS000004079
ISS
SpoSPBC582.08
GO:0005829 cytosol C
IDA
SpoSPBC582.08
GO:0004021 L-alanine:2-oxoglutarate aminotransferase
activity		 F
IMP
SceS000004079
ISS
SpoSPBC582.08
GO:0006523 alanine biosynthetic process P
IMP
SceS000004079
GO:0006524 alanine catabolic process P
IMP
SceS000004079
GO:0006537 glutamate biosynthetic process P
IC
SpoSPBC582.08
GO:0042851 L-alanine metabolic process P
ISS
SpoSPBC582.08

Back to the top
YOGY Home YOGY Help

Search for gene by ID or name:

Query species:

Include wild-cards:   

Search for GO info:  

GO info in one table:

s.khadayate@ucl.ac.uk