YOGY Home YOGY Help

Search term: YLR098C

Gene summary:

Species Saccharomyces cerevisiae (Sce)
Primary name CHA4
SGD link S000004088
Alternative ID YLR098C
Description DNA binding transcriptional activator, mediates serine/threonine activation of the catabolic L-serine (L-threonine) deaminase (CHA1); Zinc-finger protein with Zn[2]-Cys[6] fungal-type binuclear cluster domain
Synonyms YLR098C
Datasets
KOGs
Inparanoid
HomoloGene
OrthoMCL
Curated

Search for gene by ID or name:

Query species:

Include wild-cards:   

Search for GO info:  

GO info in one table:

HomoloGene results:

HomoloGene cluster Phylogenetic pattern
31775

Species Gene ID NCBI link UniProt link
Saccharomyces cerevisiae (Sce) CHA4
(S000004088)		 GI:6323127
Kluyveromyces lactis (Kla) KLLA0F19602g GI:50311857
Eremothecium gossypii (Ego) AGOS_AGR061C GI:45201156
Magnaporthe grisea (Mgr) MGG_01518 GI:39951751
Neurospora crassa (Ncr) NCU08294.1 GI:32417044


GO terms for Homologene results:

GO ID GO term GO aspect Evidence codes and associations
GO:0005634 nucleus C
IPI
SceS000004088
GO:0003700 transcription factor activity F
IDA
SceS000004088
IPI
SceS000004088
ISS
SceS000004088
GO:0043565 sequence-specific DNA binding F
IDA
SceS000004088
GO:0006355 regulation of transcription, DNA-dependent P
IMP
SceS000004088
GO:0009063 cellular amino acid catabolic process P
IGI
SceS000004088
IMP
SceS000004088

Back to the top

OrthoMCL results:

Selected databases only

OrthoMCL cluster Phylogenetic pattern
OG1_31451

Species OrthoMCL
sequence		 Model organism
protein page		 UniProt link
Ashbya gossypii (Ago) ago4371 AGR061C
Candida glabrata (Cgl) cgl5152 CAGL0M11440g
Kluyveromyces lactis (Kla) kla4960 KLLA0F19602g
Saccharomyces cerevisiae (Sce) sce4179 YLR098C
(S000004088)


GO terms for OrthoMCL results:

GO ID GO term GO aspect Evidence codes and associations
GO:0005634 nucleus C
IPI
SceS000004088
GO:0003700 transcription factor activity F
IDA
SceS000004088
IPI
SceS000004088
ISS
SceS000004088
GO:0043565 sequence-specific DNA binding F
IDA
SceS000004088
GO:0006355 regulation of transcription, DNA-dependent P
IMP
SceS000004088
GO:0009063 cellular amino acid catabolic process P
IGI
SceS000004088
IMP
SceS000004088

Back to the top

Curated yeast ortholog results:

S. pombe
systematic ID		 S. cerevisiae
systematic ID
SPCC777.02
(O74541)		 YLR098C
(S000004088)
SPCC757.04
(O74915)		 YLR098C
(S000004088)
SPBC1683.13c
(Q9P6I9)		 YLR098C
(S000004088)


GO terms for curated homolog results:

GO ID GO term GO aspect Evidence codes and associations
GO:0000978
ISS
SpoSPBC1683.13c
SPCC757.04
SPCC777.02
GO:0005634 nucleus C
IDA
SpoSPCC777.02
SPBC1683.13c
IPI
SceS000004088
ISS
SpoSPCC777.02
SPBC1683.13c
SPCC757.04
GO:0005829 cytosol C
IDA
SpoSPCC777.02
SPCC757.04
GO:0003677 DNA binding F
ISS
SpoSPCC777.02
SPCC757.04
SPBC1683.13c
GO:0003700 transcription factor activity F
IDA
SceS000004088
IPI
SceS000004088
ISS
SceS000004088
GO:0003704 specific RNA polymerase II transcription factor
activity		 F
NAS
SpoSPBC1683.13c
SPCC777.02
SPCC757.04
GO:0005515 protein binding F
IPI
SpoSPBC1683.13c
GO:0008270 zinc ion binding F
ISS
SpoSPCC777.02
SPCC757.04
SPBC1683.13c
GO:0043565 sequence-specific DNA binding F
IDA
SceS000004088
GO:0006355 regulation of transcription, DNA-dependent P
IMP
SceS000004088
ISS
SpoSPCC777.02
SPBC1683.13c
SPCC757.04
GO:0006808 regulation of nitrogen utilization P
IMP
SpoSPBC1683.13c
GO:0009063 cellular amino acid catabolic process P
IGI
SceS000004088
IMP
SceS000004088
GO:0032569 gene-specific transcription from RNA polymerase II
promoter		 P
NAS
SpoSPBC1683.13c
SPCC757.04
SPCC777.02

Back to the top
YOGY Home YOGY Help

Search for gene by ID or name:

Query species:

Include wild-cards:   

Search for GO info:  

GO info in one table:

s.khadayate@ucl.ac.uk