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Search term: YLR136C


Gene summary:

Species Saccharomyces cerevisiae (Sce)
Primary name TIS11
SGD link S000004126
Alternative ID YLR136C
Description mRNA-binding protein expressed during iron starvation; binds to a sequence element in the 3'-untranslated regions of specific mRNAs to mediate their degradation; involved in iron homeostasis
Synonyms YLR136C
Datasets
KOGs
Inparanoid
HomoloGene
OrthoMCL
Curated

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GO info in one table:


KOG results:

KOG name Phylogenetic pattern
(and link to KOGs with this pattern)
KOG1677 ACDHYPE

KOGs classification KOGs description
POORLY CHARACTERIZED CCCH-type Zn-finger protein

Species KOG link NCBI link UniProt link
Arabidopsis thaliana (Ath) At1g04990 GI:15220380
Arabidopsis thaliana (Ath) At1g29560 GI:15220484
Arabidopsis thaliana (Ath) At1g29570 GI:15220486
Arabidopsis thaliana (Ath) At1g29600 GI:15220490
Arabidopsis thaliana (Ath) At1g29610 GI:15220491
Arabidopsis thaliana (Ath) At1g32360_1 GI:15223185
Arabidopsis thaliana (Ath) At1g66810 GI:15219751
Arabidopsis thaliana (Ath) At1g68200 GI:15221301
Arabidopsis thaliana (Ath) At2g28450_1 GI:15226399
Arabidopsis thaliana (Ath) At2g32930 GI:18403134
Arabidopsis thaliana (Ath) At2g35430 GI:15226988
Arabidopsis thaliana (Ath) At2g47850 GI:15227148
Arabidopsis thaliana (Ath) At3g02830 GI:6728979
Arabidopsis thaliana (Ath) At3g06410 GI:15230715
Arabidopsis thaliana (Ath) At3g12130 GI:18399496
Arabidopsis thaliana (Ath) At3g12680 GI:15230564
Arabidopsis thaliana (Ath) At3g19360 GI:15230353
Arabidopsis thaliana (Ath) At3g48440 GI:15228379
Arabidopsis thaliana (Ath) At5g06770 GI:15240145
Arabidopsis thaliana (Ath) At5g16540 GI:4689376
Arabidopsis thaliana (Ath) At5g18550 GI:15238861
Arabidopsis thaliana (Ath) At5g63260 GI:15242694
Caenorhabditis elegans (Cel) CE03005
(WBGene00003864)
GI:17538616 Q17877
Caenorhabditis elegans (Cel) CE04629
(WBGene00004078)
GI:17562800 Q20667
Caenorhabditis elegans (Cel) CE07613
(WBGene00003865)
GI:17566742 Q23359
Caenorhabditis elegans (Cel) CE14978
(WBGene00013319)
GI:17543792 O18251
Caenorhabditis elegans (Cel) CE15683
(WBGene00007961)
GI:17539068 O45289
Caenorhabditis elegans (Cel) CE16004
(WBGene00009537)
GI:17540276 O45491
Caenorhabditis elegans (Cel) CE16006
(WBGene00009539)
GI:17540280 O45493
Caenorhabditis elegans (Cel) CE18170 GI:17508789
Caenorhabditis elegans (Cel) CE18171 GI:17508791 O02289
Caenorhabditis elegans (Cel) CE18657
(WBGene00003388)
GI:17533629 Q9XV46
Caenorhabditis elegans (Cel) CE20756 GI:17560696
Caenorhabditis elegans (Cel) CE20757 GI:17560698
Caenorhabditis elegans (Cel) CE21237
(WBGene00003230)
GI:17541622 Q9XUB2
Caenorhabditis elegans (Cel) CE22669
(WBGene00013370)
GI:17570419 Q9U1Y2
Caenorhabditis elegans (Cel) CE23326
(WBGene00013794)
GI:17544434 Q9U2V4
Caenorhabditis elegans (Cel) CE23328
(WBGene00013796)
GI:17544438 Q9U2V2
Caenorhabditis elegans (Cel) CE23329
(WBGene00013797)
GI:17544440 Q9U2V1
Caenorhabditis elegans (Cel) CE24535 GI:17570417
Caenorhabditis elegans (Cel) CE26846
(WBGene00003231)
GI:17535271 Q09436
Caenorhabditis elegans (Cel) CE28097
(WBGene00003228)
GI:17535269 Q9XTB3
Caenorhabditis elegans (Cel) CE28134
(WBGene00004027)
GI:17556058 Q94131
Drosophila melanogaster (Dme) 7292800 GI:7292800
Homo sapiens (Hsa) Hs4507961
(ZFP36)
GI:4507961 P26651
Homo sapiens (Hsa) Hs15812180
(ZFP36L1)
GI:15812180 Q07352
Homo sapiens (Hsa) Hs15812178
(ZFP36L2)
GI:15812178 P47974
Saccharomyces cerevisiae (Sce) YDR151c
(S000002558)
GI:6320355 P47976
Saccharomyces cerevisiae (Sce) YLR136c
(S000004126)
GI:6323165 P47977
Schizosaccharomyces pombe (Spo) SPBC1718.07c GI:19113245 P47979
Encephalitozoon cuniculi (Ecu) ECU01g0830 GI:19075093


GO terms for KOG results:

GO ID GO term GO aspect Evidence codes and associations
GO:0005575 cellular_component C
ND
AthAt1g04990
At1g29600
At3g19360
At2g35430
At1g32360
At1g29610
At3g48440
At1g29570
At1g29560
At2g32930
At2g28450
At5g18550
GO:0005634 nucleus C
IC
SceS000002558
IDA
AthAt3g12680
CelWBGene00004027
HsaZFP36
SceS000004126
SpoSPBC1718.07c
TAS
AthAt3g12680
GO:0005737 cytoplasm C
IDA
CelWBGene00003230
WBGene00003864
WBGene00004078
WBGene00003865
WBGene00003231
WBGene00003228
HsaZFP36
SceS000004126
GO:0005813 centrosome C
IDA
CelWBGene00003230
WBGene00003864
WBGene00003865
WBGene00004027
GO:0005829 cytosol C
IDA
CelWBGene00004027
HsaZFP36
SpoSPBC1718.07c
GO:0043186 P granule C
IDA
CelWBGene00003230
WBGene00003864
WBGene00004078
WBGene00003865
WBGene00003228
WBGene00004027
WBGene00003231
GO:0003674 molecular_function F
NAS
CelWBGene00003228
ND
AthAt1g29610
GO:0003676 nucleic acid binding F
ISS
AthAt1g29600
At3g19360
At3g48440
At3g12130
At1g32360
At2g32930
At3g06410
At1g04990
At2g47850
At1g66810
At3g02830
At1g68200
At2g28450
At5g06770
At5g16540
At5g18550
At5g63260
GO:0003677 DNA binding F
TAS
AthAt3g02830
At2g32930
At5g16540
GO:0003700 transcription factor activity F
ISS
AthAt2g35430
At3g12130
At1g32360
At3g19360
At1g68200
At5g06770
NAS
HsaZFP36L1
TAS
HsaZFP36L2
GO:0003723 RNA binding F
IDA
AthAt3g12680
ISS
AthAt3g12680
CelWBGene00003228
GO:0003727 single-stranded RNA binding F
IDA
CelWBGene00004078
TAS
HsaZFP36
GO:0003729 mRNA binding F
IDA
HsaZFP36L1
ZFP36
SceS000004126
ISS
SceS000002558
GO:0003730 mRNA 3'-UTR binding F
IDA
CelWBGene00003230
WBGene00004078
WBGene00003231
GO:0004518 nuclease activity F
TAS
AthAt3g02830
At5g16540
At2g32930
GO:0005515 protein binding F
IPI
HsaZFP36
ZFP36L1
SpoSPBC1718.07c
GO:0008187 poly-pyrimidine tract binding F
IDA
CelWBGene00003230
GO:0008266 poly(U) RNA binding F
IDA
CelWBGene00004078
GO:0016564 transcription repressor activity F
IDA
CelWBGene00004078
GO:0016565 general transcriptional repressor
activity
F
IDA
CelWBGene00004027
GO:0017091 AU-rich element binding F
IDA
HsaZFP36
SpoSPBC1718.07c
GO:0019901 protein kinase binding F
IPI
CelWBGene00003230
WBGene00003231
GO:0019904 protein domain specific binding F
IPI
CelWBGene00003230
WBGene00003231
GO:0030528 transcription regulator activity F
TAS
CelWBGene00004078
GO:0000003 reproduction P
IMP
CelWBGene00003864
WBGene00003228
GO:0000122 negative regulation of transcription from RNA
polymerase II promoter
P
IDA
CelWBGene00004078
WBGene00004027
GO:0000750 pheromone-dependent signal transduction involved
in conjugation with cellular fusion
P
IMP
SpoSPBC1718.07c
GO:0000956 nuclear-transcribed mRNA catabolic
process
P
IGI
SceS000002558
IMP
SceS000004126
GO:0001704 formation of primary germ layer P
IMP
CelWBGene00003228
WBGene00004027
GO:0001708 cell fate specification P
IMP
CelWBGene00004078
WBGene00003228
GO:0001709 cell fate determination P
IMP
CelWBGene00004027
TAS
AthAt3g12680
GO:0002009 morphogenesis of an epithelium P
IMP
CelWBGene00003231
WBGene00003228
GO:0002119 nematode larval development P
IMP
CelWBGene00003230
GO:0006402 mRNA catabolic process P
IDA
HsaZFP36
IMP
SpoSPBC1718.07c
GO:0006879 cellular iron ion homeostasis P
IGI
SceS000002558
IMP
SceS000004126
GO:0007093 mitotic cell cycle checkpoint P
IMP
SpoSPBC1718.07c
GO:0007094 mitotic cell cycle spindle assembly
checkpoint
P
IGI
SpoSPBC1718.07c
GO:0008150 biological_process P
ND
AthAt3g06410
At3g02830
At3g48440
At1g04990
At2g47850
At1g29610
At1g29600
At1g29570
At2g32930
At1g66810
At5g16540
At5g18550
At5g63260
GO:0008283 cell proliferation P
TAS
HsaZFP36L2
GO:0008340 determination of adult lifespan P
IMP
CelWBGene00004078
GO:0009790 embryo development P
IMP
CelWBGene00004078
GO:0009792 embryo development ending in birth or egg
hatching
P
IMP
CelWBGene00004078
WBGene00003230
WBGene00003231
WBGene00003228
WBGene00004027
GO:0009880 embryonic pattern specification P
IGI
CelWBGene00003228
WBGene00004027
IMP
CelWBGene00004078
WBGene00003228
WBGene00004027
GO:0010171 body morphogenesis P
IMP
CelWBGene00003231
GO:0016481 negative regulation of transcription P
IMP
CelWBGene00004027
GO:0030010 establishment of cell polarity P
IMP
CelWBGene00003228
GO:0030163 protein catabolic process P
IMP
CelWBGene00003864
GO:0031030 negative regulation of septation initiation
signaling
P
IGI
SpoSPBC1718.07c
GO:0031137 regulation of conjugation with cellular
fusion
P
IGI
SpoSPBC1718.07c
GO:0032880 regulation of protein localization P
IGI
CelWBGene00003230
WBGene00003231
IMP
CelWBGene00003230
GO:0040007 growth P
IMP
CelWBGene00003230
GO:0040010 positive regulation of growth rate P
IMP
CelWBGene00003230
WBGene00004078
WBGene00003865
WBGene00003231
WBGene00004027
GO:0040011 locomotion P
IMP
CelWBGene00003231
GO:0043488 regulation of mRNA stability P
IDA
HsaZFP36L1
GO:0045449 regulation of transcription P
TAS
AthAt3g12130
At1g32360
At3g19360
At5g06770
At2g35430
At1g68200
GO:0045839 negative regulation of mitosis P
IMP
SpoSPBC1718.07c
GO:0048599 oocyte development P
IMP
CelWBGene00003864
WBGene00003865
WBGene00003388
GO:0060213 positive regulation of nuclear-transcribed mRNA
poly(A) tail shortening
P
IDA
HsaZFP36

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HomoloGene results:

HomoloGene cluster Phylogenetic pattern
117769

Species Gene ID NCBI link UniProt link
Saccharomyces cerevisiae (Sce) CTH1
(S000002558)
GI:6320355 P47976
Saccharomyces cerevisiae (Sce) TIS11
(S000004126)
GI:6323165 P47977