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Search term: YLR141W


Gene summary:

Species Saccharomyces cerevisiae (Sce)
Primary name RRN5
SGD link S000004131
Alternative ID YLR141W
Description Protein involved in transcription of rDNA by RNA polymerase I; transcription factor, member of UAF (upstream activation factor) family along with Rrn9p and Rrn10p
Synonyms YLR141W
Datasets
KOGs
Inparanoid
HomoloGene
OrthoMCL
Curated

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HomoloGene results:

HomoloGene cluster Phylogenetic pattern
117871

Species Gene ID NCBI link UniProt link
Saccharomyces cerevisiae (Sce) RRN5
(S000004131)
GI:6323170
Kluyveromyces lactis (Kla) KLLA0D16940g GI:50307659


GO terms for Homologene results:

GO ID GO term GO aspect Evidence codes and associations
GO:0000500 RNA polymerase I upstream activating factor
complex
C
TAS
SceS000004131
GO:0000182 rDNA binding F
TAS
SceS000004131
GO:0003701 RNA polymerase I transcription factor
activity
F
TAS
SceS000004131
GO:0006360 transcription from RNA polymerase I
promoter
P
TAS
SceS000004131
GO:0042790 transcription of nuclear rRNA large RNA polymerase
I transcript
P
IGI
SceS000004131

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OrthoMCL results:

Selected databases only

OrthoMCL cluster Phylogenetic pattern
OG1_17590

Species OrthoMCL
sequence
Model organism
protein page
UniProt link
Ashbya gossypii (Ago) ago4146 AGL166W
Candida glabrata (Cgl) cgl4852 CAGL0M04477g
Debaryomyces hansenii (Dha) dha4061 DEHA0E18524g
Kluyveromyces lactis (Kla) kla2808 KLLA0D16940g
Saccharomyces cerevisiae (Sce) sce4224 YLR141W
(S000004131)
Schizosaccharomyces pombe (Spo) spo4201 SPAC29A4.10 O14013
Yarrowia lipolytica (Yli) yli5546 YALI0F04906g


GO terms for OrthoMCL results:

GO ID GO term GO aspect Evidence codes and associations
GO:0000500 RNA polymerase I upstream activating factor
complex
C
TAS
SceS000004131
SpoSPAC29A4.10
GO:0005634 nucleus C
IDA
SpoSPAC29A4.10
GO:0005730 nucleolus C
IDA
SpoSPAC29A4.10
GO:0000182 rDNA binding F
IDA
SpoSPAC29A4.10
TAS
SceS000004131
GO:0003701 RNA polymerase I transcription factor
activity
F
IDA
SpoSPAC29A4.10
TAS
SceS000004131
GO:0006355 regulation of transcription, DNA-dependent P
NAS
SpoSPAC29A4.10
GO:0006360 transcription from RNA polymerase I
promoter
P
IDA
SpoSPAC29A4.10
TAS
SceS000004131
GO:0042790 transcription of nuclear rRNA large RNA polymerase
I transcript
P
IGI
SceS000004131

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Curated yeast ortholog results:

S. pombe
systematic ID
S. cerevisiae
systematic ID
SPAC29A4.10
(O14013)
YLR141W
(S000004131)


GO terms for curated homolog results:

GO ID GO term GO aspect Evidence codes and associations
GO:0000500 RNA polymerase I upstream activating factor
complex
C
TAS
SceS000004131
SpoSPAC29A4.10
GO:0005634 nucleus C
IDA
SpoSPAC29A4.10
GO:0005730 nucleolus C
IDA
SpoSPAC29A4.10
GO:0000182 rDNA binding F
IDA
SpoSPAC29A4.10
TAS
SceS000004131
GO:0003701 RNA polymerase I transcription factor
activity
F
IDA
SpoSPAC29A4.10
TAS
SceS000004131
GO:0006355 regulation of transcription, DNA-dependent P
NAS
SpoSPAC29A4.10
GO:0006360 transcription from RNA polymerase I
promoter
P
IDA
SpoSPAC29A4.10
TAS
SceS000004131
GO:0042790 transcription of nuclear rRNA large RNA polymerase
I transcript
P
IGI
SceS000004131

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