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Search term: YLR142W

Gene summary:

Species Saccharomyces cerevisiae (Sce)
Primary name PUT1
SGD link S000004132
Alternative ID YLR142W
Description Proline oxidase, nuclear-encoded mitochondrial protein involved in utilization of proline as sole nitrogen source; PUT1 transcription is induced by Put3p in the presence of proline and the absence of a preferred nitrogen source
Synonyms YLR142W
Datasets
KOGs
Inparanoid
HomoloGene
OrthoMCL
Curated

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GO info in one table:

KOG results:

KOG name Phylogenetic pattern
(and link to KOGs with this pattern)
KOG0186 ACDHYP-

KOGs classification KOGs description
METABOLISM Proline oxidase

Species KOG link NCBI link UniProt link
Arabidopsis thaliana (Ath) At3g30775 GI:15229459
Arabidopsis thaliana (Ath) At5g38710 GI:15240986
Caenorhabditis elegans (Cel) CE15561 GI:17538300
Drosophila melanogaster (Dme) 7295507 GI:7295507
Homo sapiens (Hsa) Hs10864043
(PRODH2)		 GI:10864043 O00420
Homo sapiens (Hsa) Hs19924111 GI:19924111
Homo sapiens (Hsa) HsM5174645 GI:5174645
Saccharomyces cerevisiae (Sce) YLR142w
(S000004132)		 GI:6323171 P09368
Schizosaccharomyces pombe (Spo) SPCC70.03c GI:19076037 O74524
Arabidopsis thaliana (Ath) At3g30775 GI:15229459
Arabidopsis thaliana (Ath) At5g38710 GI:15240986
Caenorhabditis elegans (Cel) CE15561 GI:17538300
Drosophila melanogaster (Dme) 7295507 GI:7295507
Homo sapiens (Hsa) Hs10864043
(PRODH2)		 GI:10864043 O00420
Homo sapiens (Hsa) Hs19924111 GI:19924111
Homo sapiens (Hsa) HsM5174645 GI:5174645
Saccharomyces cerevisiae (Sce) YLR142w
(S000004132)		 GI:6323171 P09368
Schizosaccharomyces pombe (Spo) SPCC70.03c GI:19076037 O74524
Arabidopsis thaliana (Ath) At3g30775 GI:15229459
Arabidopsis thaliana (Ath) At5g38710 GI:15240986
Caenorhabditis elegans (Cel) CE15561 GI:17538300
Drosophila melanogaster (Dme) 7295507 GI:7295507
Homo sapiens (Hsa) Hs10864043
(PRODH2)		 GI:10864043 O00420
Homo sapiens (Hsa) Hs19924111 GI:19924111
Homo sapiens (Hsa) HsM5174645 GI:5174645
Saccharomyces cerevisiae (Sce) YLR142w
(S000004132)		 GI:6323171 P09368
Schizosaccharomyces pombe (Spo) SPCC70.03c GI:19076037 O74524


GO terms for KOG results:

GO ID GO term GO aspect Evidence codes and associations
GO:0005739 mitochondrion C
IDA
AthAt3g30775
SceS000004132
TAS
SceS000004132
GO:0005759 mitochondrial matrix C
ISS
SpoSPCC70.03c
GO:0004657 proline dehydrogenase activity F
IDA
SceS000004132
IMP
AthAt3g30775
SceS000004132
ISS
AthAt5g38710
At3g30775
SpoSPCC70.03c
GO:0006537 glutamate biosynthetic process P
ISS
AthAt3g30775
At5g38710
SpoSPCC70.03c
TAS
SceS000004132
GO:0006562 proline catabolic process P
IGI
AthAt3g30775
ISS
AthAt3g30775
At5g38710
SpoSPCC70.03c
GO:0006979 response to oxidative stress P
IEP
AthAt3g30775
GO:0010133 proline catabolic process to glutamate P
IMP
SceS000004132
TAS
SceS000004132
GO:0055114 oxidation reduction P
RCA
SceS000004132

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HomoloGene results:

HomoloGene cluster Phylogenetic pattern
39703

Species Gene ID NCBI link UniProt link
Saccharomyces cerevisiae (Sce) PUT1
(S000004132)		 GI:6323171 P09368
Kluyveromyces lactis (Kla) KLLA0D16962g GI:50307661
Eremothecium gossypii (Ego) AGOS_AGL165W GI:45200932


GO terms for Homologene results:

GO ID GO term GO aspect Evidence codes and associations
GO:0005739 mitochondrion C
IDA
SceS000004132
TAS
SceS000004132
GO:0004657 proline dehydrogenase activity F
IDA
SceS000004132
IMP
SceS000004132
GO:0006537 glutamate biosynthetic process P
TAS
SceS000004132
GO:0010133 proline catabolic process to glutamate P
IMP
SceS000004132
TAS
SceS000004132
GO:0055114 oxidation reduction P
RCA
SceS000004132

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OrthoMCL results:

Selected databases only

OrthoMCL cluster Phylogenetic pattern
OG1_1003

Species OrthoMCL
sequence		 Model organism
protein page		 UniProt link
Anopheles gambiae (Aga) aga6359 ENSANGP00000005630
Anopheles gambiae (Aga) aga14367 ENSANGP00000013670
Anopheles gambiae (Aga) aga6358 ENSANGP00000017867
Ashbya gossypii (Ago) ago4147 AGL165W
Arabidopsis thaliana (Ath) ath15418 At3g30775.1
Arabidopsis thaliana (Ath) ath25638 At5g38710.1
Caenorhabditis elegans (Cel) cel590 B0513.5
(CE37309;
WBGene00007197)
Candida glabrata (Cgl) cgl4853 CAGL0M04499g
Cryptococcus neoformans (Cne) cne3347 167.m05824
Cryptococcus neoformans (Cne) cne3348 167.m05825
Dictyostelium discoideum (Ddi) ddi2362 DDB0167252
Debaryomyces hansenii (Dha) dha4074 DEHA0E18799g
Drosophila melanogaster (Dme) dme18899 CG1417-PA
(FBgn0003423)
Drosophila melanogaster (Dme) dme18900 CG1417-PB
(FBgn0003423)
Drosophila melanogaster (Dme) dme18906 CG1417-PC
(FBgn0003423)
Drosophila melanogaster (Dme) dme18901 CG1417-PD
(FBgn0003423)
Drosophila melanogaster (Dme) dme18902 CG1417-PE
(FBgn0003423)
Drosophila melanogaster (Dme) dme18903 CG1417-PF
(FBgn0003423)
Drosophila melanogaster (Dme) dme18905 CG1417-PG
(FBgn0003423)
Drosophila melanogaster (Dme) dme18904 CG1417-PH
(FBgn0003423)
Danio rerio (Dre) dre25721 ENSDARP00000011846
Danio rerio (Dre) dre9912 ENSDARP00000018338
Danio rerio (Dre) dre9913 ENSDARP00000030578
(zgc:92040)		 Q6DG56
Takifugu rubripes (Fru) fru27360 SINFRUP00000136291
Takifugu rubripes (Fru) fru19088 SINFRUP00000144507
Takifugu rubripes (Fru) fru8205 SINFRUP00000145789
Takifugu rubripes (Fru) fru19089 SINFRUP00000169366
Takifugu rubripes (Fru) fru27359 SINFRUP00000169745
Takifugu rubripes (Fru) fru8204 SINFRUP00000171743
Gallus gallus (Gga) gga7584 ENSGALP00000012517
(PRODH)
Homo sapiens (Hsa) hsa16224 ENSP00000292886
Homo sapiens (Hsa) hsa16223 ENSP00000301175
(PRODH2)		 Q9UF12
Homo sapiens (Hsa) hsa21164 ENSP00000334726
(PRODH)		 O43272-2
Homo sapiens (Hsa) hsa21165 ENSP00000349577
(PRODH)		 O43272-4
Kluyveromyces lactis (Kla) kla2809 KLLA0D16962g
Mus musculus (Mmu) mmu10017 ENSMUSP00000003620
(MGI:97770)		 Q9WU79
Mus musculus (Mmu) mmu23609 ENSMUSP00000062214
(MGI:1929093)		 Q8VCZ9
Neurospora crassa (Ncr) ncr2841 NCU02936.2
Oryza sativa (Osa) osa143 32.m00138
Rattus norvegicus (Rno) rno7744 ENSRNOP00000002576
(RGD:1590932)
Rattus norvegicus (Rno) rno1508 ENSRNOP00000028392
(RGD:1306761)		 B0BNG1
Rattus norvegicus (Rno) rno7745 ENSRNOP00000044507
Saccharomyces cerevisiae (Sce) sce4225 YLR142W
(S000004132)
Schizosaccharomyces pombe (Spo) spo3307 SPCC70.03c O74524
Yarrowia lipolytica (Yli) yli1133 YALI0B09625g


GO terms for OrthoMCL results:

GO ID GO term GO aspect Evidence codes and associations
GO:0005739 mitochondrion C
IDA
AthAt3g30775
MmuMGI:1929093
MGI:97770
SceS000004132
ISO
MmuMGI:97770
TAS
SceS000004132
GO:0005743 mitochondrial inner membrane C
IDA
MmuMGI:97770
MGI:1929093
GO:0005759 mitochondrial matrix C
ISS
DmeFBgn0003423
SpoSPCC70.03c
NAS
DmeFBgn0003423
GO:0003674 molecular_function F
ND
MmuMGI:1929093
GO:0004657 proline dehydrogenase activity F
IDA
SceS000004132
IMP
AthAt3g30775
SceS000004132
ISO
MmuMGI:97770
ISS
AthAt5g38710
At3g30775
DmeFBgn0003423
MmuMGI:97770
SpoSPCC70.03c
GO:0016597 amino acid binding F
ISO
MmuMGI:97770
GO:0006537 glutamate biosynthetic process P
ISS
AthAt3g30775
At5g38710
DmeFBgn0003423
SpoSPCC70.03c
NAS
DmeFBgn0003423
TAS
SceS000004132
GO:0006562 proline catabolic process P
IGI
AthAt3g30775
ISS
AthAt3g30775
At5g38710
DmeFBgn0003423
SpoSPCC70.03c
NAS
DmeFBgn0003423
GO:0006979 response to oxidative stress P
IEP
AthAt3g30775
GO:0007626 locomotory behavior P
IMP
DmeFBgn0003423
GO:0008150 biological_process P
ND
MmuMGI:1929093
GO:0008152 metabolic process P
ISS
MmuMGI:97770
GO:0010133 proline catabolic process to glutamate P
IMP
SceS000004132
TAS
SceS000004132
GO:0042331 phototaxis P
IMP
DmeFBgn0003423
GO:0055114 oxidation reduction P
RCA
SceS000004132

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Curated yeast ortholog results:

S. pombe
systematic ID		 S. cerevisiae
systematic ID
SPCC70.03c
(O74524)		 YLR142W
(S000004132)


GO terms for curated homolog results:

GO ID GO term GO aspect Evidence codes and associations
GO:0005739 mitochondrion C
IDA
SceS000004132
TAS
SceS000004132
GO:0005759 mitochondrial matrix C
ISS
SpoSPCC70.03c
GO:0004657 proline dehydrogenase activity F
IDA
SceS000004132
IMP
SceS000004132
ISS
SpoSPCC70.03c
GO:0006537 glutamate biosynthetic process P
ISS
SpoSPCC70.03c
TAS
SceS000004132
GO:0006562 proline catabolic process P
ISS
SpoSPCC70.03c
GO:0010133 proline catabolic process to glutamate P
IMP
SceS000004132
TAS
SceS000004132
GO:0055114 oxidation reduction P
RCA
SceS000004132

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GO info in one table:

s.khadayate@ucl.ac.uk