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Search term: YLR165C


Gene summary:

Species Saccharomyces cerevisiae (Sce)
Primary name PUS5
SGD link S000004155
Alternative ID YLR165C
Description Pseudouridine synthase, catalyzes only the formation of pseudouridine (Psi)-2819 in mitochondrial 21S rRNA; not essential for viability
Synonyms YLR165C
Datasets
KOGs
Inparanoid
HomoloGene
OrthoMCL
Curated

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KOG results:

KOG name Phylogenetic pattern
(and link to KOGs with this pattern)
KOG1919 ACDHYPE

KOGs classification KOGs description
INFORMATION STORAGE AND PROCESSING RNA pseudouridylate synthases

Species KOG link NCBI link UniProt link
Arabidopsis thaliana (Ath) At1g56345 GI:15223518
Arabidopsis thaliana (Ath) At1g76050 GI:15222932
Arabidopsis thaliana (Ath) At1g78910 GI:15219235
Arabidopsis thaliana (Ath) At3g19440 GI:15230381
Arabidopsis thaliana (Ath) At3g52260 GI:15231171
Arabidopsis thaliana (Ath) At4g21770 GI:15234586
Arabidopsis thaliana (Ath) At5g51140 GI:15241389
Caenorhabditis elegans (Cel) CE11898
(WBGene00019498)
GI:17534965 O16686
Drosophila melanogaster (Dme) 7297707 GI:7297707
Drosophila melanogaster (Dme) 7297709 GI:7297709
Homo sapiens (Hsa) Hs14249470 GI:14249470
Homo sapiens (Hsa) Hs17158025
(RPUSD1)
GI:17158025 Q9UJJ7
Homo sapiens (Hsa) Hs17478211 GI:17478211
Homo sapiens (Hsa) Hs20481524 GI:20481524
Saccharomyces cerevisiae (Sce) YDL036c
(S000002194)
GI:6320168 Q12069
Saccharomyces cerevisiae (Sce) YGR169c
(S000003401)
GI:6321608 P53294
Saccharomyces cerevisiae (Sce) YLR165c
(S000004155)
GI:6323194 Q06244
Saccharomyces cerevisiae (Sce) YOL066c_1 GI:6324506 Q12362
Schizosaccharomyces pombe (Spo) SPAC18B11.02c GI:19113793 Q09709
Encephalitozoon cuniculi (Ecu) ECU05g0680 GI:19173607 Q8SVK5


GO terms for KOG results:

GO ID GO term GO aspect Evidence codes and associations
GO:0005575 cellular_component C
ND
AthAt5g51140
At3g52260
HsaRPUSD1
GO:0005634 nucleus C
IDA
SceS000002194
ISS
SpoSPAC18B11.02c
GO:0005737 cytoplasm C
IDA
SceS000002194
S000003401
ISS
SpoSPAC18B11.02c
GO:0005739 mitochondrion C
IDA
SceS000003401
IMP
SceS000004155
S000002194
ISM
SceS000002194
ISS
SpoSPAC18B11.02c
GO:0005829 cytosol C
IDA
SpoSPAC18B11.02c
GO:0003674 molecular_function F
ND
HsaRPUSD1
GO:0004730 pseudouridylate synthase activity F
IMP
SceS000004155
ISS
SceS000004155
GO:0009982 pseudouridine synthase activity F
IDA
SceS000003401
S000002194
IMP
SceS000002194
S000003401
ISS
AthAt3g52260
At1g76050
At3g19440
At5g51140
At1g56345
At4g21770
At1g78910
SpoSPAC18B11.02c
TAS
AthAt4g21770
At3g19440
At1g56345
At1g78910
At5g51140
At1g76050
GO:0000154 rRNA modification P
IMP
SceS000004155
GO:0001522 pseudouridine synthesis P
IMP
SceS000004155
RCA
SceS000002194
GO:0006914 autophagy P
RCA
SceS000004155
GO:0008150 biological_process P
ND
HsaRPUSD1
GO:0031119 tRNA pseudouridine synthesis P
IDA
SceS000003401
S000002194
IMP
SceS000003401
S000002194
ISS
SpoSPAC18B11.02c

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HomoloGene results:

HomoloGene cluster Phylogenetic pattern
39712

Species Gene ID NCBI link UniProt link
Saccharomyces cerevisiae (Sce) PUS5
(S000004155)
GI:6323194 Q06244
Kluyveromyces lactis (Kla) KLLA0D18172g GI:50307743
Eremothecium gossypii (Ego) AGOS_AGL134C GI:45200963


GO terms for Homologene results:

GO ID GO term GO aspect Evidence codes and associations
GO:0005739 mitochondrion C
IMP
SceS000004155
GO:0004730 pseudouridylate synthase activity F
IMP
SceS000004155
ISS
SceS000004155
GO:0000154 rRNA modification P
IMP
SceS000004155
GO:0001522 pseudouridine synthesis P
IMP
SceS000004155
GO:0006914 autophagy P
RCA
SceS000004155

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OrthoMCL results:

Selected databases only

OrthoMCL cluster Phylogenetic pattern
OG1_20688

Species OrthoMCL
sequence
Model organism
protein page
UniProt link
Ashbya gossypii (Ago) ago4178 AGL134C
Candida glabrata (Cgl) cgl2180 CAGL0H02717g
Debaryomyces hansenii (Dha) dha4085 DEHA0E19096g
Kluyveromyces lactis (Kla) kla2864 KLLA0D18172g
Saccharomyces cerevisiae (Sce) sce4265 YLR165C
(S000004155)


GO terms for OrthoMCL results:

GO ID GO term GO aspect Evidence codes and associations
GO:0005739 mitochondrion C
IMP
SceS000004155
GO:0004730 pseudouridylate synthase activity F
IMP
SceS000004155
ISS
SceS000004155
GO:0000154 rRNA modification P
IMP
SceS000004155
GO:0001522 pseudouridine synthesis P
IMP
SceS000004155
GO:0006914 autophagy P
RCA
SceS000004155

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