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Search term: YLR182W


Gene summary:

Species Saccharomyces cerevisiae (Sce)
Primary name SWI6
SGD link S000004172
Alternative ID YLR182W
Description Transcription cofactor, forms complexes with DNA-binding proteins Swi4p and Mbp1p to regulate transcription at the G1/S transition; involved in meiotic gene expression; localization regulated by phosphorylation; potential Cdc28p substrate
Synonyms YLR182W
Datasets
KOGs
Inparanoid
HomoloGene
OrthoMCL
Curated

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HomoloGene results:

HomoloGene cluster Phylogenetic pattern
117873

Species Gene ID NCBI link UniProt link
Saccharomyces cerevisiae (Sce) SWI6
(S000004172)
GI:6323211
Kluyveromyces lactis (Kla) SWI6_KLULA GI:50304643
Eremothecium gossypii (Ego) AGOS_AFR690C GI:45199209


GO terms for Homologene results:

GO ID GO term GO aspect Evidence codes and associations
GO:0005634 nucleus C
IDA
SceS000004172
GO:0005737 cytoplasm C
IDA
SceS000004172
GO:0030907 MBF transcription complex C
IMP
SceS000004172
IPI
SceS000004172
GO:0033309 SBF transcription complex C
IDA
SceS000004172
IMP
SceS000004172
IPI
SceS000004172
GO:0003713 transcription coactivator activity F
IDA
SceS000004172
IMP
SceS000004172
GO:0005515 protein binding F
IPI
SceS000004172
GO:0000083 regulation of transcription involved in G1/S phase
of mitotic cell cycle
P
TAS
SceS000004172
GO:0007126 meiosis P
IGI
SceS000004172
IMP
SceS000004172
GO:0030969 UFP-specific transcription factor mRNA processing
involved in endoplasmic reticulum unfolded protein
response
P
IMP
SceS000004172
GO:0043193 positive regulation of gene-specific
transcription
P
IDA
SceS000004172
IMP
SceS000004172

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OrthoMCL results:

Selected databases only

OrthoMCL cluster Phylogenetic pattern
OG1_13186

Species OrthoMCL
sequence
Model organism
protein page
UniProt link
Ashbya gossypii (Ago) ago3883 AFR690C
Candida glabrata (Cgl) cgl254 CAGL0B01166g
Cryptococcus neoformans (Cne) cne903 163.m06311
Debaryomyces hansenii (Dha) dha3871 DEHA0E14256g
Kluyveromyces lactis (Kla) kla1276 KLLA0C01826g
Neurospora crassa (Ncr) ncr7388 NCU07587.2
Saccharomyces cerevisiae (Sce) sce4282 YLR182W
(S000004172)
Schizosaccharomyces pombe (Spo) spo2715 SPBC336.12c P01129
Yarrowia lipolytica (Yli) yli2240 YALI0C12639g


GO terms for OrthoMCL results:

GO ID GO term GO aspect Evidence codes and associations
GO:0000978
IC
SpoSPBC336.12c
GO:0005634 nucleus C
IDA
SceS000004172
GO:0005737 cytoplasm C
IDA
SceS000004172
SpoSPBC336.12c
GO:0030907 MBF transcription complex C
IMP
SceS000004172
IPI
SceS000004172
TAS
SpoSPBC336.12c
GO:0033309 SBF transcription complex C
IDA
SceS000004172
IMP
SceS000004172
IPI
SceS000004172
GO:0003704 specific RNA polymerase II transcription factor
activity
F
NAS
SpoSPBC336.12c
GO:0003713 transcription coactivator activity F
IDA
SceS000004172
IMP
SceS000004172
GO:0005515 protein binding F
IPI
SceS000004172
SpoSPBC336.12c
GO:0000083 regulation of transcription involved in G1/S phase
of mitotic cell cycle
P
TAS
SceS000004172
SpoSPBC336.12c
GO:0007068 negative regulation of transcription,
mitotic
P
IDA
SpoSPBC336.12c
GO:0007090 regulation of S phase of mitotic cell
cycle
P
IGI
SpoSPBC336.12c
GO:0007126 meiosis P
IGI
SceS000004172
IMP
SceS000004172
GO:0009303 rRNA transcription P
IDA
SpoSPBC336.12c
GO:0030969 UFP-specific transcription factor mRNA processing
involved in endoplasmic reticulum unfolded protein
response
P
IMP
SceS000004172
GO:0032569 gene-specific transcription from RNA polymerase II
promoter
P
IC
SpoSPBC336.12c
GO:0043193 positive regulation of gene-specific
transcription
P
IDA
SceS000004172
IMP
SceS000004172
GO:0045896 regulation of transcription, mitotic P
IDA
SpoSPBC336.12c
GO:0045897 positive regulation of transcription,
mitotic
P
IDA
SpoSPBC336.12c
GO:0051037 regulation of transcription, meiotic P
IDA
SpoSPBC336.12c
GO:0051038 negative regulation of transcription,
meiotic
P
IDA
SpoSPBC336.12c
GO:0051039 positive regulation of transcription,
meiotic
P
IDA
SpoSPBC336.12c

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Curated yeast ortholog results:

S. pombe
systematic ID
S. cerevisiae
systematic ID
SPBC336.12c
(P01129)
YLR182W
(S000004172)


GO terms for curated homolog results:

GO ID GO term GO aspect Evidence codes and associations
GO:0000978
IC
SpoSPBC336.12c
GO:0005634 nucleus C
IDA
SceS000004172
GO:0005737 cytoplasm C
IDA
SceS000004172
SpoSPBC336.12c
GO:0030907 MBF transcription complex C
IMP
SceS000004172
IPI
SceS000004172
TAS
SpoSPBC336.12c
GO:0033309 SBF transcription complex C
IDA
SceS000004172
IMP
SceS000004172
IPI
SceS000004172
GO:0003704 specific RNA polymerase II transcription factor
activity
F
NAS
SpoSPBC336.12c
GO:0003713 transcription coactivator activity F
IDA
SceS000004172
IMP
SceS000004172
GO:0005515 protein binding F
IPI
SceS000004172
SpoSPBC336.12c
GO:0000083 regulation of transcription involved in G1/S phase
of mitotic cell cycle
P
TAS
SceS000004172
SpoSPBC336.12c
GO:0007068 negative regulation of transcription,
mitotic
P
IDA
SpoSPBC336.12c
GO:0007090 regulation of S phase of mitotic cell
cycle
P
IGI
SpoSPBC336.12c
GO:0007126 meiosis P
IGI
SceS000004172
IMP
SceS000004172
GO:0009303 rRNA transcription P
IDA
SpoSPBC336.12c
GO:0030969 UFP-specific transcription factor mRNA processing
involved in endoplasmic reticulum unfolded protein
response
P
IMP
SceS000004172
GO:0032569 gene-specific transcription from RNA polymerase II
promoter
P
IC
SpoSPBC336.12c
GO:0043193 positive regulation of gene-specific
transcription
P
IDA
SceS000004172
IMP
SceS000004172
GO:0045896 regulation of transcription, mitotic P
IDA
SpoSPBC336.12c
GO:0045897 positive regulation of transcription,
mitotic
P
IDA
SpoSPBC336.12c
GO:0051037 regulation of transcription, meiotic P
IDA
SpoSPBC336.12c
GO:0051038 negative regulation of transcription,
meiotic
P
IDA
SpoSPBC336.12c
GO:0051039 positive regulation of transcription,
meiotic
P
IDA
SpoSPBC336.12c

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GO info in one table:

s.khadayate@ucl.ac.uk