YOGY Home YOGY Help

Search term: YLR212C


Gene summary:

Species Saccharomyces cerevisiae (Sce)
Primary name TUB4
SGD link S000004202
Alternative ID YLR212C
Description Gamma-tubulin, involved in nucleating microtubules from both the cytoplasmic and nuclear faces of the spindle pole body
Synonyms YLR212C
Datasets
KOGs
Inparanoid
HomoloGene
OrthoMCL
Curated

Search for gene by ID or name:

Query species:

Include wild-cards:   

Search for GO info:  

GO info in one table:


KOG results:

KOG name Phylogenetic pattern
(and link to KOGs with this pattern)
KOG1374 ACDHYPE

KOGs classification KOGs description
CELLULAR PROCESSES AND SIGNALING Gamma tubulin

Species KOG link NCBI link UniProt link
Arabidopsis thaliana (Ath) At3g61650 GI:15233174
Arabidopsis thaliana (Ath) At5g05620 GI:15239181
Caenorhabditis elegans (Cel) CE00224
(WBGene00006540)
GI:17555356 P34475
Drosophila melanogaster (Dme) 7295874
(gammaTub23C)
GI:17136618
Drosophila melanogaster (Dme) 7298556
(gammaTub37C)
GI:17316358
Homo sapiens (Hsa) Hs14785923 GI:14785923
Homo sapiens (Hsa) Hs4507731 GI:4507731
Homo sapiens (Hsa) Hs7705913 GI:7705913
Homo sapiens (Hsa) Hs7706751
(TUBG2)
GI:7706751 Q9NRH3
Saccharomyces cerevisiae (Sce) YLR212c
(S000004202)
GI:6323241 P53378
Schizosaccharomyces pombe (Spo) SPBC32F12.04 GI:19112939 P25295
Encephalitozoon cuniculi (Ecu) ECU08g0670 GI:19173393 Q8SRD2


GO terms for KOG results:

GO ID GO term GO aspect Evidence codes and associations
GO:0000923 equatorial microtubule organizing
center
C
IDA
SpoSPBC32F12.04
GO:0000928 gamma-tubulin small complex, spindle pole
body
C
IPI
SceS000004202
GO:0000930 gamma-tubulin complex C
IPI
DmegammaTub23C
TAS
SpoSPBC32F12.04
GO:0000931 gamma-tubulin large complex C
IDA
DmegammaTub23C
GO:0005618 cell wall C
IDA
AthAt5g05620
GO:0005635 nuclear envelope C
IDA
AthAt5g05620
GO:0005737 cytoplasm C
IDA
AthAt5g05620
At3g61650
GO:0005739 mitochondrion C
IDA
AthAt5g05620
At3g61650
GO:0005813 centrosome C
IDA
CelWBGene00006540
GO:0005815 microtubule organizing center C
ISS
DmegammaTub23C
gammaTub37C
NAS
DmegammaTub23C
gammaTub37C
GO:0005816 spindle pole body C
IDA
SpoSPBC32F12.04
GO:0005822 inner plaque of spindle pole body C
IDA
SceS000004202
GO:0005824 outer plaque of spindle pole body C
IDA
SceS000004202
GO:0005829 cytosol C
EXP
HsaTUBG2
GO:0005874 microtubule C
IDA
AthAt5g05620
At3g61650
ISS
DmegammaTub37C
gammaTub23C
GO:0005875 microtubule associated complex C
IDA
DmegammaTub37C
GO:0005886 plasma membrane C
IDA
AthAt3g61650
At5g05620
GO:0008274 gamma-tubulin ring complex C
IDA
DmegammaTub23C
GO:0008275 gamma-tubulin small complex C
IDA
DmegammaTub37C
IPI
DmegammaTub23C
ISS
DmegammaTub23C
GO:0015630 microtubule cytoskeleton C
TAS
HsaTUBG2
GO:0045298 tubulin complex C
NAS
DmegammaTub23C
gammaTub37C
GO:0005198 structural molecule activity F
ISS
AthAt3g61650
At5g05620
TAS
HsaTUBG2
GO:0005200 structural constituent of cytoskeleton F
IPI
SceS000004202
ISS
CelWBGene00006540
DmegammaTub37C
gammaTub23C
GO:0005515 protein binding F
IPI
SpoSPBC32F12.04
GO:0005525 GTP binding F
IDA
DmegammaTub23C
gammaTub37C
GO:0019001 guanyl nucleotide binding F
IDA
DmegammaTub23C
GO:0051011 microtubule minus-end binding F
IDA
DmegammaTub23C
GO:0000003 reproduction P
IMP
CelWBGene00006540
GO:0000070 mitotic sister chromatid segregation P
IGI
SpoSPBC32F12.04
IMP
CelWBGene00006540
RCA
SceS000004202
GO:0000087 M phase of mitotic cell cycle P
RCA
SceS000004202
GO:0000278 mitotic cell cycle P
RCA
SceS000004202
GO:0000279 M phase P
RCA
SceS000004202
GO:0000280 nuclear division P
RCA
SceS000004202
GO:0000741 karyogamy P
RCA
SceS000004202
GO:0000742 karyogamy involved in conjugation with cellular
fusion
P
RCA
SceS000004202
GO:0000746 conjugation P
RCA
SceS000004202
GO:0000747 conjugation with cellular fusion P
RCA
SceS000004202
GO:0000819 sister chromatid segregation P
RCA
SceS000004202
GO:0000910 cytokinesis P
IMP
AthAt3g61650
At5g05620
CelWBGene00006540
GO:0000914 phragmoplast assembly P
IGI
AthAt3g61650
At5g05620
GO:0006898 receptor-mediated endocytosis P
IMP
CelWBGene00006540
GO:0006997 nucleus organization P
RCA
SceS000004202
GO:0007017 microtubule-based process P
ISS
DmegammaTub37C
gammaTub23C
NAS
DmegammaTub37C
gammaTub23C
GO:0007020 microtubule nucleation P
IC
SpoSPBC32F12.04
IDA
DmegammaTub23C
IMP
CelWBGene00006540
DmegammaTub23C
IPI
SceS000004202
GO:0007051 spindle organization P
TAS
SpoSPBC32F12.04
GO:0007052 mitotic spindle organization P
IMP
CelWBGene00006540
DmegammaTub23C
GO:0007059 chromosome segregation P
RCA
SceS000004202
GO:0007067 mitosis P
IMP
CelWBGene00006540
RCA
SceS000004202
GO:0007105 cytokinesis, site selection P
IMP
SpoSPBC32F12.04
GO:0009553 embryo sac development P
IGI
AthAt3g61650
At5g05620
GO:0009792 embryo development ending in birth or egg
hatching
P
IMP
CelWBGene00006540
GO:0010103 stomatal complex morphogenesis P
IMP
AthAt5g05620
At3g61650
GO:0010457 centriole-centriole cohesion P
IDA
DmegammaTub23C
GO:0019953 sexual reproduction P
RCA
SceS000004202
GO:0030472 mitotic spindle organization in
nucleus
P
IMP
SceS000004202
GO:0031122 cytoplasmic microtubule organization P
TAS
SpoSPBC32F12.04
GO:0040035 hermaphrodite genitalia development P
IMP
CelWBGene00006540
GO:0040039 inductive cell migration P
IMP
CelWBGene00006540
GO:0048284 organelle fusion P
RCA
SceS000004202
GO:0048366 leaf development P
IMP
AthAt5g05620
At3g61650
GO:0048768 root hair cell tip growth P
IMP
AthAt3g61650
At5g05620
GO:0051297 centrosome organization P
IMP
DmegammaTub23C
GO:0051301 cell division P
IMP
CelWBGene00006540
GO:0051306 mitotic sister chromatid separation P
IDA
DmegammaTub23C
GO:0051640 organelle localization P
RCA
SceS000004202
GO:0051641 cellular localization P
IMP
AthAt3g61650
At5g05620
GO:0051656 establishment of organelle localization P
RCA
SceS000004202
GO:0051726 regulation of cell cycle P
IMP
DmegammaTub23C

Back to the top

HomoloGene results:

HomoloGene cluster Phylogenetic pattern
68840

Species Gene ID NCBI link UniProt link
Saccharomyces cerevisiae (Sce) TUB4
(S000004202)
GI:6323241 P53378
Kluyveromyces lactis (Kla) KLLA0C16247g GI:50305931
Eremothecium gossypii (Ego) AGOS_ADR076C GI:45187949