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Search term: YLR268W

Gene summary:

Species Saccharomyces cerevisiae (Sce)
Primary name SEC22
SGD link S000004258
Alternative ID YLR268W
Description R-SNARE protein; assembles into SNARE complex with Bet1p, Bos1p and Sed5p; cycles between the ER and Golgi complex; involved in anterograde and retrograde transport between the ER and Golgi; synaptobrevin homolog
Synonyms YLR268W
Datasets
KOGs
Inparanoid
HomoloGene
OrthoMCL
Curated

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GO info in one table:

KOG results:

KOG name Phylogenetic pattern
(and link to KOGs with this pattern)
KOG0862 ACDHYPE

KOGs classification KOGs description
CELLULAR PROCESSES AND SIGNALING Synaptobrevin/VAMP-like protein SEC22

Species KOG link NCBI link UniProt link
Arabidopsis thaliana (Ath) At1g11890 GI:15221123
Arabidopsis thaliana (Ath) At5g52270 GI:15242949
Caenorhabditis elegans (Cel) CE19895
(WBGene00018853)		 GI:17568149 Q94241
Drosophila melanogaster (Dme) 7290088
(FBgn0025617)		 GI:18921099
Homo sapiens (Hsa) Hs4759086 GI:4759086
Homo sapiens (Hsa) Hs4759088 GI:4759088 Q9BRL7
Homo sapiens (Hsa) Hs14591919
(SEC22A)		 GI:14591919 Q96IW7
Homo sapiens (Hsa) Hs14591921
(SEC22C)		 GI:14591921 Q9BRL7
Saccharomyces cerevisiae (Sce) YLR268w
(S000004258)		 GI:6323298 P22214
Schizosaccharomyces pombe (Spo) SPBC2A9.08c GI:19113010 Q9Y7L0
Encephalitozoon cuniculi (Ecu) ECU11g0980 GI:19074898 Q8SQW1
Arabidopsis thaliana (Ath) At1g11890 GI:15221123
Arabidopsis thaliana (Ath) At5g52270 GI:15242949
Caenorhabditis elegans (Cel) CE19895
(WBGene00018853)		 GI:17568149 Q94241
Drosophila melanogaster (Dme) 7290088
(FBgn0025617)		 GI:18921099
Homo sapiens (Hsa) Hs4759086 GI:4759086
Homo sapiens (Hsa) Hs4759088 GI:4759088 Q9BRL7
Homo sapiens (Hsa) Hs14591919
(SEC22A)		 GI:14591919 Q96IW7
Homo sapiens (Hsa) Hs14591921
(SEC22C)		 GI:14591921 Q9BRL7
Saccharomyces cerevisiae (Sce) YLR268w
(S000004258)		 GI:6323298 P22214
Schizosaccharomyces pombe (Spo) SPBC2A9.08c GI:19113010 Q9Y7L0
Encephalitozoon cuniculi (Ecu) ECU11g0980 GI:19074898 Q8SQW1


GO terms for KOG results:

GO ID GO term GO aspect Evidence codes and associations
GO:0005783 endoplasmic reticulum C
IDA
AthAt1g11890
SceS000004258
GO:0005789 endoplasmic reticulum membrane C
ISS
SpoSPBC2A9.08c
GO:0005794 Golgi apparatus C
IDA
AthAt1g11890
SceS000004258
GO:0005886 plasma membrane C
IDA
AthAt1g11890
GO:0012507 ER to Golgi transport vesicle membrane C
IDA
SceS000004258
GO:0016020 membrane C
ISS
AthAt1g11890
GO:0016021 integral to membrane C
IDA
SceS000004258
GO:0031201 SNARE complex C
IDA
SceS000004258
GO:0044431 Golgi apparatus part C
RCA
SceS000004258
GO:0003674 molecular_function F
ND
AthAt5g52270
GO:0005215 transporter activity F
ISS
AthAt1g11890
TAS
HsaSEC22A
GO:0005484 SNAP receptor activity F
IDA
SceS000004258
ISS
SpoSPBC2A9.08c
GO:0006886 intracellular protein transport P
NAS
SpoSPBC2A9.08c
GO:0006888 ER to Golgi vesicle-mediated transport P
IMP
SceS000004258
ISS
SpoSPBC2A9.08c
GO:0006890 retrograde vesicle-mediated transport, Golgi to
ER		 P
IMP
SceS000004258
ISS
SpoSPBC2A9.08c
GO:0016192 vesicle-mediated transport P
ISS
AthAt1g11890
RCA
SceS000004258
GO:0045184 establishment of protein localization P
RCA
SceS000004258
GO:0048279 vesicle fusion with endoplasmic
reticulum		 P
IC
SceS000004258
NAS
SceS000004258
GO:0048280 vesicle fusion with Golgi apparatus P
IMP
SceS000004258

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HomoloGene results:

HomoloGene cluster Phylogenetic pattern
3597

Species Gene ID NCBI link UniProt link
Homo sapiens (Hsa) SEC22B GI:94429050
Canis familiaris (Cfa) SEC22B GI:57098751
Mus musculus (Mmu) Sec22b
(MGI:1338759)		 GI:6755448 O08547
Rattus norvegicus (Rno) Sec22b GI:71043604
Drosophila melanogaster (Dme) CG7359
(FBgn0025617)		 GI:18921099
Anopheles gambiae (Aga) AgaP_AGAP012717 GI:58375833
Caenorhabditis elegans (Cel) F55A4.1
(CE19895;
WBGene00018853)		 GI:17568149 Q94241
Schizosaccharomyces pombe (Spo) sec22
(SPBC2A9.08c)		 GI:19113010 Q9Y7L0
Saccharomyces cerevisiae (Sce) SEC22
(S000004258)		 GI:6323298 P22214
Kluyveromyces lactis (Kla) KLLA0F20251g GI:50311915
Eremothecium gossypii (Ego) AGOS_AGR267W GI:45201363
Magnaporthe grisea (Mgr) MGG_04050 GI:39944078
Neurospora crassa (Ncr) NCU06708.1 GI:32413028
Arabidopsis thaliana (Ath) SEC22 GI:15221123
Oryza sativa (Osa) Os03g0791500 GI:115455839
Plasmodium falciparum (Pfa) MAL3P7.7 GI:124505059


GO terms for Homologene results:

GO ID GO term GO aspect Evidence codes and associations
GO:0000139 Golgi membrane C
IDA
MmuMGI:1338759
GO:0005783 endoplasmic reticulum C
IDA
AthSEC22
SceS000004258
GO:0005789 endoplasmic reticulum membrane C
IDA
MmuMGI:1338759
ISS
SpoSPBC2A9.08c
GO:0005793 ER-Golgi intermediate compartment C
IDA
HsaSEC22B
GO:0005794 Golgi apparatus C
IDA
AthSEC22
SceS000004258
GO:0005886 plasma membrane C
IDA
AthSEC22
GO:0012507 ER to Golgi transport vesicle membrane C
IDA
SceS000004258
GO:0016020 membrane C
ISS
AthSEC22
GO:0016021 integral to membrane C
IDA
SceS000004258
GO:0031201 SNARE complex C
IDA
SceS000004258
GO:0044431 Golgi apparatus part C
RCA
SceS000004258
GO:0005215 transporter activity F
ISS
AthSEC22
GO:0005484 SNAP receptor activity F
IDA
SceS000004258
ISS
SpoSPBC2A9.08c
GO:0005515 protein binding F
IPI
HsaSEC22B
GO:0006886 intracellular protein transport P
NAS
SpoSPBC2A9.08c
GO:0006888 ER to Golgi vesicle-mediated transport P
IMP
SceS000004258
ISS
SpoSPBC2A9.08c
TAS
HsaSEC22B
MmuMGI:1338759
GO:0006890 retrograde vesicle-mediated transport, Golgi to
ER		 P
IMP
SceS000004258
ISS
SpoSPBC2A9.08c
GO:0016192 vesicle-mediated transport P
IDA
MmuMGI:1338759
ISS
AthSEC22
RCA
SceS000004258
GO:0045184 establishment of protein localization P
RCA
SceS000004258
GO:0048279 vesicle fusion with endoplasmic
reticulum		 P
IC
SceS000004258
NAS
SceS000004258
GO:0048280 vesicle fusion with Golgi apparatus P
IMP
SceS000004258

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OrthoMCL results:

Selected databases only

OrthoMCL cluster Phylogenetic pattern
OG1_1951

Species OrthoMCL
sequence		 Model organism
protein page		 UniProt link
Anopheles gambiae (Aga) aga12739 ENSANGP00000016192
Ashbya gossypii (Ago) ago4578 AGR267W
Arabidopsis thaliana (Ath) ath1249 At1g11890.1
Arabidopsis thaliana (Ath) ath27179 At5g52270.1
Caenorhabditis elegans (Cel) cel10337 F55A4.1
(CE19895;
WBGene00018853)
Candida glabrata (Cgl) cgl554 CAGL0C03179g
Cryptococcus neoformans (Cne) cne579 163.m06252
Dictyostelium discoideum (Ddi) ddi4103 DDB0190688
Debaryomyces hansenii (Dha) dha5096 DEHA0F15961g
Drosophila melanogaster (Dme) dme15966 CG7359-PA
(FBgn0025617)
Danio rerio (Dre) dre22595 ENSDARP00000011605
(sec22bb)		 Q7SXP0
Danio rerio (Dre) dre21223 ENSDARP00000043498
(sec22ba)		 Q7ZV15
Takifugu rubripes (Fru) fru27689 SINFRUP00000127019
Takifugu rubripes (Fru) fru24528 SINFRUP00000160799
Gallus gallus (Gga) gga22193 ENSGALP00000004591
(RCJMB04_15c3)		 Q5ZJW4
Homo sapiens (Hsa) hsa1842 ENSP00000286336
Kluyveromyces lactis (Kla) kla4989 KLLA0F20251g
Mus musculus (Mmu) mmu17223 ENSMUSP00000029476
(MGI:1338759)		 O08547
Neurospora crassa (Ncr) ncr6524 NCU06708.2
Oryza sativa (Osa) osa10417 2749.m00158
Oryza sativa (Osa) osa62453 6675.m00236
Oryza sativa (Osa) osa62480 6675.m00256
Plasmodium falciparum (Pfa) pfa2851 PFC0890w
Rattus norvegicus (Rno) rno16682 ENSRNOP00000025327
(RGD:1309988)		 Q4KM74
Saccharomyces cerevisiae (Sce) sce4374 YLR268W
(S000004258)
Schizosaccharomyces pombe (Spo) spo2088 SPBC2A9.08c Q9Y7L0
Yarrowia lipolytica (Yli) yli3626 YALI0D21956g


GO terms for OrthoMCL results:

GO ID GO term GO aspect Evidence codes and associations
GO:0000139 Golgi membrane C
IDA
MmuMGI:1338759
GO:0005783 endoplasmic reticulum C
IDA
AthAt1g11890
SceS000004258
GO:0005789 endoplasmic reticulum membrane C
IDA
MmuMGI:1338759
ISS
SpoSPBC2A9.08c
GO:0005794 Golgi apparatus C
IDA
AthAt1g11890
SceS000004258
GO:0005886 plasma membrane C
IDA
AthAt1g11890
GO:0012507 ER to Golgi transport vesicle membrane C
IDA
SceS000004258
GO:0016020 membrane C
ISS
AthAt1g11890
GO:0016021 integral to membrane C
IDA
SceS000004258
GO:0031201 SNARE complex C
IDA
SceS000004258
GO:0044431 Golgi apparatus part C
RCA
SceS000004258
GO:0003674 molecular_function F
ND
AthAt5g52270
GO:0005215 transporter activity F
ISS
AthAt1g11890
GO:0005484 SNAP receptor activity F
IDA
SceS000004258
ISS
SpoSPBC2A9.08c
GO:0006886 intracellular protein transport P
NAS
SpoSPBC2A9.08c
GO:0006888 ER to Golgi vesicle-mediated transport P
IMP
SceS000004258
ISS
SpoSPBC2A9.08c
TAS
MmuMGI:1338759
GO:0006890 retrograde vesicle-mediated transport, Golgi to
ER		 P
IMP
SceS000004258
ISS
SpoSPBC2A9.08c
GO:0016192 vesicle-mediated transport P
IDA
MmuMGI:1338759
ISS
AthAt1g11890
RCA
SceS000004258
GO:0045184 establishment of protein localization P
RCA
SceS000004258
GO:0048279 vesicle fusion with endoplasmic
reticulum		 P
IC
SceS000004258
NAS
SceS000004258
GO:0048280 vesicle fusion with Golgi apparatus P
IMP
SceS000004258

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Curated yeast ortholog results:

S. pombe
systematic ID		 S. cerevisiae
systematic ID
SPBC2A9.08c
(Q9Y7L0)		 YLR268W
(S000004258)


GO terms for curated homolog results:

GO ID GO term GO aspect Evidence codes and associations
GO:0005783 endoplasmic reticulum C
IDA
SceS000004258
GO:0005789 endoplasmic reticulum membrane C
ISS
SpoSPBC2A9.08c
GO:0005794 Golgi apparatus C
IDA
SceS000004258
GO:0012507 ER to Golgi transport vesicle membrane C
IDA
SceS000004258
GO:0016021 integral to membrane C
IDA
SceS000004258
GO:0031201 SNARE complex C
IDA
SceS000004258
GO:0044431 Golgi apparatus part C
RCA
SceS000004258
GO:0005484 SNAP receptor activity F
IDA
SceS000004258
ISS
SpoSPBC2A9.08c
GO:0006886 intracellular protein transport P
NAS
SpoSPBC2A9.08c
GO:0006888 ER to Golgi vesicle-mediated transport P
IMP
SceS000004258
ISS
SpoSPBC2A9.08c
GO:0006890 retrograde vesicle-mediated transport, Golgi to
ER		 P
IMP
SceS000004258
ISS
SpoSPBC2A9.08c
GO:0016192 vesicle-mediated transport P
RCA
SceS000004258
GO:0045184 establishment of protein localization P
RCA
SceS000004258
GO:0048279 vesicle fusion with endoplasmic
reticulum		 P
IC
SceS000004258
NAS
SceS000004258
GO:0048280 vesicle fusion with Golgi apparatus P
IMP
SceS000004258

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Query species:

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Search for GO info:  

GO info in one table:

s.khadayate@ucl.ac.uk