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Search term: YLR272C

Gene summary:

Species Saccharomyces cerevisiae (Sce)
Primary name YCS4
SGD link S000004262
Alternative ID YLR272C
Description Subunit of the condensin complex; required for establishment and maintenance of chromosome condensation, chromosome segregation, chromatin binding of condensin, tRNA gene clustering at the nucleolus, and silencing at the mating type locus
Synonyms YLR272C
Datasets
KOGs
Inparanoid
HomoloGene
OrthoMCL
Curated

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Query species:

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Search for GO info:  

GO info in one table:

KOG results:

KOG name Phylogenetic pattern
(and link to KOGs with this pattern)
KOG0414 ACDHYPE

KOGs classification KOGs description
INFORMATION STORAGE AND PROCESSINGCELLULAR PROCESSES AND SIGNALING Chromosome condensation complex Condensin, subunit D2

Species KOG link NCBI link UniProt link
Arabidopsis thaliana (Ath) At3g57060 GI:15230204
Caenorhabditis elegans (Cel) CE24223 GI:17555736
Drosophila melanogaster (Dme) 7301805 GI:7301805
Homo sapiens (Hsa) Hs7661954 GI:7661954
Homo sapiens (Hsa) Hs20542149 GI:20542149
Saccharomyces cerevisiae (Sce) YLR272c
(S000004262)		 GI:6323302 Q06156
Schizosaccharomyces pombe (Spo) SPBC776.13 GI:19113121 O94679
Encephalitozoon cuniculi (Ecu) ECU02g1240 GI:19074043 Q8SSE2
Arabidopsis thaliana (Ath) At3g57060 GI:15230204
Caenorhabditis elegans (Cel) CE24223 GI:17555736
Drosophila melanogaster (Dme) 7301805 GI:7301805
Homo sapiens (Hsa) Hs7661954 GI:7661954
Homo sapiens (Hsa) Hs20542149 GI:20542149
Saccharomyces cerevisiae (Sce) YLR272c
(S000004262)		 GI:6323302 Q06156
Schizosaccharomyces pombe (Spo) SPBC776.13 GI:19113121 O94679
Encephalitozoon cuniculi (Ecu) ECU02g1240 GI:19074043 Q8SSE2
Arabidopsis thaliana (Ath) At3g57060 GI:15230204
Caenorhabditis elegans (Cel) CE24223 GI:17555736
Drosophila melanogaster (Dme) 7301805 GI:7301805
Homo sapiens (Hsa) Hs7661954 GI:7661954
Homo sapiens (Hsa) Hs20542149 GI:20542149
Saccharomyces cerevisiae (Sce) YLR272c
(S000004262)		 GI:6323302 Q06156
Schizosaccharomyces pombe (Spo) SPBC776.13 GI:19113121 O94679
Encephalitozoon cuniculi (Ecu) ECU02g1240 GI:19074043 Q8SSE2


GO terms for KOG results:

GO ID GO term GO aspect Evidence codes and associations
GO:0000796 condensin complex C
IDA
SpoSPBC776.13
ISS
AthAt3g57060
GO:0000799 nuclear condensin complex C
IPI
SceS000004262
TAS
SceS000004262
GO:0000939 inner kinetochore of condensed
chromosome		 C
IDA
SpoSPBC776.13
GO:0005634 nucleus C
IDA
SpoSPBC776.13
GO:0005730 nucleolus C
IDA
SceS000004262
SpoSPBC776.13
GO:0005737 cytoplasm C
IDA
SpoSPBC776.13
GO:0003674 molecular_function F
ND
SceS000004262
SpoSPBC776.13
GO:0000070 mitotic sister chromatid segregation P
IMP
SceS000004262
GO:0007076 mitotic chromosome condensation P
IMP
SceS000004262
SpoSPBC776.13
IPI
SceS000004262
TAS
SceS000004262
GO:0010032 meiotic chromosome condensation P
IMP
SceS000004262
GO:0030261 chromosome condensation P
ISS
AthAt3g57060
GO:0030466 chromatin silencing at silent mating-type
cassette		 P
IMP
SceS000004262
GO:0043007 maintenance of rDNA P
IMP
SceS000004262
GO:0070058 tRNA gene clustering P
IMP
SceS000004262

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HomoloGene results:

HomoloGene cluster Phylogenetic pattern
6497

Species Gene ID NCBI link UniProt link
Homo sapiens (Hsa) NCAPD2 GI:178056552
Pan troglodytes (Ptr) NCAPD2 GI:114643042
Canis familiaris (Cfa) NCAPD2 GI:73997747
Mus musculus (Mmu) Ncapd2
(MGI:1915548)		 GI:22165392 Q8K2Z4
Rattus norvegicus (Rno) Ncapd2 GI:109472598
Gallus gallus (Gga) NCAPD2 GI:118118378
Drosophila melanogaster (Dme) CAP-D2
(FBgn0039680)		 GI:24651092
Anopheles gambiae (Aga) AgaP_AGAP003434 GI:158290125
Caenorhabditis elegans (Cel) dpy-28
(CE31734;
WBGene00001087)		 GI:25150816
Schizosaccharomyces pombe (Spo) cnd1
(SPBC776.13)		 GI:19113121 O94679
Saccharomyces cerevisiae (Sce) YCS4
(S000004262)		 GI:6323302 Q06156
Kluyveromyces lactis (Kla) KLLA0F20119g GI:50311903
Eremothecium gossypii (Ego) AGOS_AGR273C GI:45201369
Magnaporthe grisea (Mgr) MGG_03487 GI:145616210
Neurospora crassa (Ncr) NCU09297.1 GI:32423103
Arabidopsis thaliana (Ath) AT3G57060 GI:145339600
Oryza sativa (Osa) Os07g0659500 GI:115473855


GO terms for Homologene results:

GO ID GO term GO aspect Evidence codes and associations
GO:0000228 nuclear chromosome C
IDA
HsaNCAPD2
GO:0000793 condensed chromosome C
IDA
HsaNCAPD2
MmuMGI:1915548
ISO
MmuMGI:1915548
GO:0000794 condensed nuclear chromosome C
IDA
CelWBGene00001087
GO:0000796 condensin complex C
IDA
HsaNCAPD2
SpoSPBC776.13
ISS
AthAt3g57060
DmeFBgn0039680
GO:0000797 condensin core heterodimer C
NAS
HsaNCAPD2
GO:0000799 nuclear condensin complex C
IPI
SceS000004262
TAS
SceS000004262
GO:0000805 X chromosome C
IDA
CelWBGene00001087
GO:0000939 inner kinetochore of condensed
chromosome		 C
IDA
SpoSPBC776.13
GO:0005634 nucleus C
IDA
CelWBGene00001087
SpoSPBC776.13
NAS
HsaNCAPD2
GO:0005654 nucleoplasm C
IDA
CelWBGene00001087
GO:0005730 nucleolus C
IDA
SceS000004262
SpoSPBC776.13
GO:0005737 cytoplasm C
IDA
HsaNCAPD2
SpoSPBC776.13
NAS
HsaNCAPD2
GO:0043073 germ cell nucleus C
IDA
CelWBGene00001087
GO:0045120 pronucleus C
IDA
MmuMGI:1915548
GO:0046536 dosage compensation complex C
IPI
CelWBGene00001087
GO:0003674 molecular_function F
ND
MmuMGI:1915548
SceS000004262
SpoSPBC776.13
GO:0005515 protein binding F
IPI
HsaNCAPD2
GO:0042393 histone binding F
IDA
HsaNCAPD2
NAS
HsaNCAPD2
GO:0000003 reproduction P
IMP
CelWBGene00001087
GO:0000070 mitotic sister chromatid segregation P
IMP
CelWBGene00001087
SceS000004262
ISS
DmeFBgn0039680
GO:0007052 mitotic spindle organization P
IMP
DmeFBgn0039680
GO:0007059 chromosome segregation P
IMP
CelWBGene00001087
GO:0007067 mitosis P
ISS
DmeFBgn0039680
GO:0007076 mitotic chromosome condensation P
IDA
HsaNCAPD2
IMP
DmeFBgn0039680
SceS000004262
SpoSPBC776.13
IPI
SceS000004262
NAS
HsaNCAPD2
TAS
SceS000004262
GO:0008150 biological_process P
ND
MmuMGI:1915548
GO:0009792 embryo development ending in birth or egg
hatching		 P
IMP
CelWBGene00001087
GO:0010032 meiotic chromosome condensation P
IMP
SceS000004262
GO:0010171 body morphogenesis P
IMP
CelWBGene00001087
GO:0030261 chromosome condensation P
ISS
AthAt3g57060
GO:0030466 chromatin silencing at silent mating-type
cassette		 P
IMP
SceS000004262
GO:0040010 positive regulation of growth rate P
IMP
CelWBGene00001087
GO:0040011 locomotion P
IMP
CelWBGene00001087
GO:0043007 maintenance of rDNA P
IMP
SceS000004262
GO:0045128 negative regulation of reciprocal meiotic
recombination		 P
IMP
CelWBGene00001087
GO:0045144 meiotic sister chromatid segregation P
IMP
CelWBGene00001087
GO:0070058 tRNA gene clustering P
IMP
SceS000004262

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OrthoMCL results:

Selected databases only

OrthoMCL cluster Phylogenetic pattern
OG1_2123

Species OrthoMCL
sequence		 Model organism
protein page		 UniProt link
Anopheles gambiae (Aga) aga5843 ENSANGP00000013650
Ashbya gossypii (Ago) ago4584 AGR273C
Arabidopsis thaliana (Ath) ath17102 At3g57060.1
Caenorhabditis elegans (Cel) cel18455 Y39A1B.3
(CE31734;
WBGene00001087)
Candida glabrata (Cgl) cgl553 CAGL0C03135g
Cryptococcus neoformans (Cne) cne3691 176.m02431
Dictyostelium discoideum (Ddi) ddi11245 DDB0219915
Debaryomyces hansenii (Dha) dha5494 DEHA0F24816g
Drosophila melanogaster (Dme) dme15040 CG1911-PA
(FBgn0039680)
Danio rerio (Dre) dre25018 ENSDARP00000003315
(im:6902697)		 Q568Q3
Encephalitozoon cuniculi (Ecu) ecu122 19074043
Takifugu rubripes (Fru) fru10744 SINFRUP00000156118
Takifugu rubripes (Fru) fru10745 SINFRUP00000156119
Gallus gallus (Gga) gga1539 ENSGALP00000023274
(RCJMB04_2h1)
Gallus gallus (Gga) gga1540 ENSGALP00000023275
(RCJMB04_2h1)		 Q5F475
Homo sapiens (Hsa) hsa6958 ENSP00000325017
(NCAPD2)		 Q15021
Kluyveromyces lactis (Kla) kla4983 KLLA0F20119g
Mus musculus (Mmu) mmu22744 ENSMUSP00000042260
(MGI:1915548)		 Q8K2Z4-1
Mus musculus (Mmu) mmu22745 ENSMUSP00000074120
Neurospora crassa (Ncr) ncr9063 NCU09297.2
Oryza sativa (Osa) osa53214 5955.m00120
Oryza sativa (Osa) osa51602 5981.m00114
Plasmodium falciparum (Pfa) pfa1251 PF14_0031
Rattus norvegicus (Rno) rno22234 ENSRNOP00000025889
(RGD:1562596)
Saccharomyces cerevisiae (Sce) sce4378 YLR272C
(S000004262)
Schizosaccharomyces pombe (Spo) spo1961 SPBC776.13 O94679
Yarrowia lipolytica (Yli) yli5614 YALI0F06402g


GO terms for OrthoMCL results:

GO ID GO term GO aspect Evidence codes and associations
GO:0000793 condensed chromosome C
IDA
MmuMGI:1915548
ISO
MmuMGI:1915548
GO:0000794 condensed nuclear chromosome C
IDA
CelWBGene00001087
GO:0000796 condensin complex C
IDA
SpoSPBC776.13
ISS
AthAt3g57060
DmeFBgn0039680
GO:0000799 nuclear condensin complex C
IPI
SceS000004262
TAS
SceS000004262
GO:0000805 X chromosome C
IDA
CelWBGene00001087
GO:0000939 inner kinetochore of condensed
chromosome		 C
IDA
SpoSPBC776.13
GO:0005634 nucleus C
IDA
CelWBGene00001087
SpoSPBC776.13
GO:0005654 nucleoplasm C
IDA
CelWBGene00001087
GO:0005730 nucleolus C
IDA
SceS000004262
SpoSPBC776.13
GO:0005737 cytoplasm C
IDA
SpoSPBC776.13
GO:0020011 apicoplast C
RCA
PfaPF14_0031
GO:0043073 germ cell nucleus C
IDA
CelWBGene00001087
GO:0045120 pronucleus C
IDA
MmuMGI:1915548
GO:0046536 dosage compensation complex C
IPI
CelWBGene00001087
GO:0003674 molecular_function F
ND
MmuMGI:1915548
SceS000004262
SpoSPBC776.13
GO:0000003 reproduction P
IMP
CelWBGene00001087
GO:0000070 mitotic sister chromatid segregation P
IMP
CelWBGene00001087
SceS000004262
ISS
DmeFBgn0039680
GO:0007052 mitotic spindle organization P
IMP
DmeFBgn0039680
GO:0007059 chromosome segregation P
IMP
CelWBGene00001087
GO:0007067 mitosis P
ISS
DmeFBgn0039680
GO:0007076 mitotic chromosome condensation P
IMP
DmeFBgn0039680
SceS000004262
SpoSPBC776.13
IPI
SceS000004262
TAS
SceS000004262
GO:0008150 biological_process P
ND
MmuMGI:1915548
PfaPF14_0031
GO:0009792 embryo development ending in birth or egg
hatching		 P
IMP
CelWBGene00001087
GO:0010032 meiotic chromosome condensation P
IMP
SceS000004262
GO:0010171 body morphogenesis P
IMP
CelWBGene00001087
GO:0030261 chromosome condensation P
ISS
AthAt3g57060
GO:0030466 chromatin silencing at silent mating-type
cassette		 P
IMP
SceS000004262
GO:0040010 positive regulation of growth rate P
IMP
CelWBGene00001087
GO:0040011 locomotion P
IMP
CelWBGene00001087
GO:0043007 maintenance of rDNA P
IMP
SceS000004262
GO:0045128 negative regulation of reciprocal meiotic
recombination		 P
IMP
CelWBGene00001087
GO:0045144 meiotic sister chromatid segregation P
IMP
CelWBGene00001087
GO:0070058 tRNA gene clustering P
IMP
SceS000004262

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Curated yeast ortholog results:

S. pombe
systematic ID		 S. cerevisiae
systematic ID
SPBC776.13
(O94679)		 YLR272C
(S000004262)