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Search term: YLR316C

Gene summary:

Species Saccharomyces cerevisiae (Sce)
Primary name TAD3
SGD link S000004308
Alternative ID YLR316C
Description Subunit of tRNA-specific adenosine-34 deaminase, forms a heterodimer with Tad2p that converts adenosine to inosine at the wobble position of several tRNAs
Synonyms YLR316C
Datasets
KOGs
Inparanoid
HomoloGene
OrthoMCL
Curated

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GO info in one table:

KOG results:

KOG name Phylogenetic pattern
(and link to KOGs with this pattern)
KOG2771 ACDHYPE

KOGs classification KOGs description
INFORMATION STORAGE AND PROCESSING Subunit of tRNA-specific adenosine-34 deaminase

Species KOG link NCBI link UniProt link
Arabidopsis thaliana (Ath) At5g24670 GI:15238606
Caenorhabditis elegans (Cel) CE22043_1 GI:17555942
Drosophila melanogaster (Dme) 7302591 GI:18485146
Homo sapiens (Hsa) Hs19923945
(ADAT3)		 GI:19923945 Q96EY9
Saccharomyces cerevisiae (Sce) YLR316c
(S000004308)		 GI:9755339 Q9URQ3
Schizosaccharomyces pombe (Spo) SPAP27G11.04c GI:19114320 Q9P7N4
Encephalitozoon cuniculi (Ecu) ECU09g0990 GI:19173221


GO terms for KOG results:

GO ID GO term GO aspect Evidence codes and associations
GO:0005575 cellular_component C
ND
AthAt5g24670
GO:0005634 nucleus C
IDA
SceS000004308
SpoSPAP27G11.04c
ISS
SpoSPAP27G11.04c
GO:0005737 cytoplasm C
IDA
SceS000004308
ISS
SpoSPAP27G11.04c
GO:0005829 cytosol C
IDA
SpoSPAP27G11.04c
GO:0008251 tRNA-specific adenosine deaminase
activity		 F
IDA
SceS000004308
ISS
SpoSPAP27G11.04c
GO:0008270 zinc ion binding F
ISS
AthAt5g24670
GO:0016787 hydrolase activity F
ISS
AthAt5g24670
GO:0046982 protein heterodimerization activity F
NAS
SpoSPAP27G11.04c
GO:0006400 tRNA modification P
IDA
SceS000004308
ISS
SpoSPAP27G11.04c
GO:0008150 biological_process P
ND
AthAt5g24670

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HomoloGene results:

HomoloGene cluster Phylogenetic pattern
39766

Species Gene ID NCBI link UniProt link
Schizosaccharomyces pombe (Spo) SPAP27G11.04c GI:19114320 Q9P7N4
Saccharomyces cerevisiae (Sce) TAD3
(S000004308)		 GI:9755339 Q9URQ3
Kluyveromyces lactis (Kla) KLLA0C18403g GI:50306117
Eremothecium gossypii (Ego) AGOS_AFR493C GI:45199011


GO terms for Homologene results:

GO ID GO term GO aspect Evidence codes and associations
GO:0005634 nucleus C
IDA
SceS000004308
SpoSPAP27G11.04c
ISS
SpoSPAP27G11.04c
GO:0005737 cytoplasm C
IDA
SceS000004308
ISS
SpoSPAP27G11.04c
GO:0005829 cytosol C
IDA
SpoSPAP27G11.04c
GO:0008251 tRNA-specific adenosine deaminase
activity		 F
IDA
SceS000004308
ISS
SpoSPAP27G11.04c
GO:0046982 protein heterodimerization activity F
NAS
SpoSPAP27G11.04c
GO:0006400 tRNA modification P
IDA
SceS000004308
ISS
SpoSPAP27G11.04c

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OrthoMCL results:

Selected databases only

OrthoMCL cluster Phylogenetic pattern
OG1_3110

Species OrthoMCL
sequence		 Model organism
protein page		 UniProt link
Anopheles gambiae (Aga) aga2519 ENSANGP00000021467
Ashbya gossypii (Ago) ago3685 AFR493C
Arabidopsis thaliana (Ath) ath24736 At5g24670.1
Caenorhabditis elegans (Cel) cel19058 Y47D3A.14
(CE30359;
WBGene00012927)
Candida glabrata (Cgl) cgl32 CAGL0A00847g
Cryptococcus neoformans (Cne) cne5516 179.m00369
Dictyostelium discoideum (Ddi) ddi12530 DDB0230180
Debaryomyces hansenii (Dha) dha1964 DEHA0C12067g
Drosophila melanogaster (Dme) dme5892 CG10927-PA
(FBgn0034360)
Danio rerio (Dre) dre29534 ENSDARP00000018770
(si:busm1-72b14.5)		 Q8JFR8
Encephalitozoon cuniculi (Ecu) ecu1372 19173221
Takifugu rubripes (Fru) fru6320 SINFRUP00000150391
Homo sapiens (Hsa) hsa15246 ENSP00000332448
(ADAT3)		 Q96EY9
Kluyveromyces lactis (Kla) kla2019 KLLA0C18403g
Mus musculus (Mmu) mmu2521 ENSMUSP00000040551
(MGI:1924344)		 Q6PAT0
Neurospora crassa (Ncr) ncr1677 NCU01725.2
Plasmodium falciparum (Pfa) pfa5358 PFL0230w
Rattus norvegicus (Rno) rno26250 ENSRNOP00000049268
Saccharomyces cerevisiae (Sce) sce4429 YLR316C
(S000004308)
Schizosaccharomyces pombe (Spo) spo3268 SPAP27G11.04c Q9P7N4
Yarrowia lipolytica (Yli) yli4953 YALI0E26543g


GO terms for OrthoMCL results:

GO ID GO term GO aspect Evidence codes and associations
GO:0005575 cellular_component C
ND
AthAt5g24670
MmuMGI:1924344
GO:0005634 nucleus C
IDA
SceS000004308
SpoSPAP27G11.04c
ISS
SpoSPAP27G11.04c
GO:0005737 cytoplasm C
IDA
SceS000004308
ISS
SpoSPAP27G11.04c
GO:0005829 cytosol C
IDA
SpoSPAP27G11.04c
GO:0003674 molecular_function F
ND
MmuMGI:1924344
GO:0008251 tRNA-specific adenosine deaminase
activity		 F
IDA
SceS000004308
ISS
SpoSPAP27G11.04c
GO:0008270 zinc ion binding F
ISS
AthAt5g24670
GO:0016787 hydrolase activity F
ISS
AthAt5g24670
GO:0046982 protein heterodimerization activity F
NAS
SpoSPAP27G11.04c
GO:0006400 tRNA modification P
IDA
SceS000004308
ISS
SpoSPAP27G11.04c
GO:0008150 biological_process P
ND
AthAt5g24670
MmuMGI:1924344

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Curated yeast ortholog results:

S. pombe
systematic ID		 S. cerevisiae
systematic ID
SPAP27G11.04c
(Q9P7N4)		 YLR316C
(S000004308)


GO terms for curated homolog results:

GO ID GO term GO aspect Evidence codes and associations
GO:0005634 nucleus C
IDA
SceS000004308
SpoSPAP27G11.04c
ISS
SpoSPAP27G11.04c
GO:0005737 cytoplasm C
IDA
SceS000004308
ISS
SpoSPAP27G11.04c
GO:0005829 cytosol C
IDA
SpoSPAP27G11.04c
GO:0008251 tRNA-specific adenosine deaminase
activity		 F
IDA
SceS000004308
ISS
SpoSPAP27G11.04c
GO:0046982 protein heterodimerization activity F
NAS
SpoSPAP27G11.04c
GO:0006400 tRNA modification P
IDA
SceS000004308
ISS
SpoSPAP27G11.04c

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s.khadayate@ucl.ac.uk