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Search term: YLR333C


Gene summary:

Species Saccharomyces cerevisiae (Sce)
Primary name RPS25B
SGD link S000004325
Alternative ID YLR333C
Description Protein component of the small (40S) ribosomal subunit; nearly identical to Rps25Ap and has similarity to rat S25 ribosomal protein
Synonyms YLR333C
Datasets
KOGs
Inparanoid
HomoloGene
OrthoMCL
Curated

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Query species:

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Search for GO info:  

GO info in one table:


KOG results:

KOG name Phylogenetic pattern
(and link to KOGs with this pattern)
KOG1767 ACDHYPE

KOGs classification KOGs description
INFORMATION STORAGE AND PROCESSING 40S ribosomal protein S25

Species KOG link NCBI link UniProt link
Arabidopsis thaliana (Ath) At2g16360 GI:15227183
Arabidopsis thaliana (Ath) At2g21580 GI:15226590
Arabidopsis thaliana (Ath) At3g30740 GI:15230856
Arabidopsis thaliana (Ath) At4g39200 GI:15234970
Caenorhabditis elegans (Cel) CE04691
(WBGene00004494)
GI:17542024 P52821
Drosophila melanogaster (Dme) 7299415 GI:17737905
Homo sapiens (Hsa) Hs17462420 GI:17462420
Homo sapiens (Hsa) Hs18546781 GI:18546781
Homo sapiens (Hsa) Hs18561745 GI:18561745
Homo sapiens (Hsa) Hs4506707
(RPS25)
GI:4506707 P62851
Saccharomyces cerevisiae (Sce) YGR027c
(S000003259)
GI:6321464 Q3E792
Saccharomyces cerevisiae (Sce) YLR333c
(S000004325)
GI:6323365 P07282
Schizosaccharomyces pombe (Spo) SPAC694.05c GI:19115397 P79009
Schizosaccharomyces pombe (Spo) SPBC3D6.15 GI:19112307 O74172
Encephalitozoon cuniculi (Ecu) ECU08g1040 GI:19173431 Q8STD9
Encephalitozoon cuniculi (Ecu) ECU08g1070 GI:19173431 Q8STD9


GO terms for KOG results:

GO ID GO term GO aspect Evidence codes and associations
GO:0005730 nucleolus C
IDA
AthAt2g16360
HsaRPS25
GO:0005829 cytosol C
EXP
HsaRPS25
IDA
SpoSPAC694.05c
SPBC3D6.15
GO:0005840 ribosome C
IDA
HsaRPS25
ISS
AthAt2g21580
At2g16360
At4g39200
NAS
HsaRPS25
GO:0005886 plasma membrane C
IDA
AthAt2g21580
At2g16360
GO:0009507 chloroplast C
IDA
AthAt2g16360
GO:0015935 small ribosomal subunit C
IDA
HsaRPS25
GO:0016020 membrane C
IDA
AthAt2g16360
GO:0022626 cytosolic ribosome C
IDA
AthAt4g39200
At2g21580
GO:0022627 cytosolic small ribosomal subunit C
IDA
AthAt2g21580
At2g16360
At4g39200
HsaRPS25
SceS000003259
S000004325
ISS
SpoSPAC694.05c
SPBC3D6.15
GO:0003723 RNA binding F
NAS
HsaRPS25
GO:0003735 structural constituent of ribosome F
IDA
SceS000003259
S000004325
ISS
AthAt2g21580
At2g16360
At4g39200
SpoSPAC694.05c
SPBC3D6.15
GO:0005515 protein binding F
IPI
HsaRPS25
GO:0006412 translation P
IC
HsaRPS25
SceS000003259
S000004325
ISS
AthAt2g21580
At4g39200
At2g16360
SpoSPAC694.05c
SPBC3D6.15
NAS
HsaRPS25
GO:0006414 translational elongation P
EXP
HsaRPS25
GO:0009792 embryo development ending in birth or egg
hatching
P
IMP
CelWBGene00004494
GO:0040010 positive regulation of growth rate P
IMP
CelWBGene00004494

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HomoloGene results:

HomoloGene cluster Phylogenetic pattern
68149

Species Gene ID NCBI link UniProt link
Homo sapiens (Hsa) RPS25 GI:4506707 P62851
Pan troglodytes (Ptr) RPS25 GI:55637069
Canis familiaris (Cfa) RPS25 GI:73955048
Mus musculus (Mmu) Rps25
(MGI:1922867)
GI:28372479 P62852
Rattus norvegicus (Rno) Rps25
(RGD:621043)
GI:53850582
Gallus gallus (Gga) RPS25 GI:118102009
Drosophila melanogaster (Dme) RpS25
(FBgn0010413)
GI:24645865
Anopheles gambiae (Aga) AgaP_AGAP004462 GI:158292201
Caenorhabditis elegans (Cel) rps-25
(CE04691;
WBGene00004494)
GI:17542024 P52821
Schizosaccharomyces pombe (Spo) rps25-1
(SPBC3D6.15)
GI:19112307 O74172
Schizosaccharomyces pombe (Spo) rps25 GI:19115397
Saccharomyces cerevisiae (Sce) RPS25A
(S000003259)
GI:6321464 Q3E792
Saccharomyces cerevisiae (Sce) RPS25B
(S000004325)
GI:6323365 P07282
Kluyveromyces lactis (Kla) KLLA0B06182g GI:50303733
Kluyveromyces lactis (Kla) KLLA0B06193g GI:50312617
Eremothecium gossypii (Ego) AGOS_ABR033C GI:45185262
Magnaporthe grisea (Mgr) MGG_06657 GI:145606102
Neurospora crassa (Ncr) NCU09476.1 GI:32418714
Arabidopsis thaliana (Ath) AT4G34555 GI:18418472
Arabidopsis thaliana (Ath) AT2G21580 GI:15226590
Arabidopsis thaliana (Ath) AT4G39200 GI:15234970
Oryza sativa (Osa) Os11g0153800 GI:115484241
Oryza sativa (Osa) Os08g0559200 GI:115477809
Oryza sativa (Osa) Os09g0568800 GI:115480759


GO terms for Homologene results:

GO ID GO term GO aspect Evidence codes and associations
GO:0005730 nucleolus C
IDA
HsaRPS25
GO:0005829 cytosol C
EXP
HsaRPS25
IDA
SpoSPBC3D6.15
GO:0005840 ribosome C
IDA
HsaRPS25
ISS
AthAt2g21580
AT4G34555
At4g39200
NAS
HsaRPS25
GO:0005886 plasma membrane C
IDA
AthAt2g21580
GO:0015935 small ribosomal subunit C
IDA
HsaRPS25
GO:0022626 cytosolic ribosome C
IDA
AthAt4g39200
At2g21580
GO:0022627 cytosolic small ribosomal subunit C
IDA
AthAt2g21580
AT4G34555
At4g39200
HsaRPS25
SceS000003259
S000004325
ISO
MmuMGI:1922867
ISS
SpoSPBC3D6.15
GO:0003723 RNA binding F
NAS
HsaRPS25
GO:0003735 structural constituent of ribosome F
IDA
SceS000003259
S000004325
ISO
MmuMGI:1922867
ISS
AthAT4G34555
At2g21580
At4g39200
SpoSPBC3D6.15
GO:0005515 protein binding F
IPI
HsaRPS25
GO:0000028 ribosomal small subunit assembly P
ISO
MmuMGI:1922867
GO:0006412 translation P
IC
HsaRPS25
SceS000003259
S000004325
ISS
AthAt2g21580
AT4G34555
At4g39200
SpoSPBC3D6.15
NAS
HsaRPS25
GO:0006414 translational elongation P
EXP
HsaRPS25
GO:0009792 embryo development ending in birth or egg
hatching
P
IMP
CelWBGene00004494
GO:0040010 positive regulation of growth rate P
IMP
CelWBGene00004494

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OrthoMCL results:

Selected databases only

OrthoMCL cluster Phylogenetic pattern
OG1_795

Species OrthoMCL
sequence
Model organism
protein page
UniProt link
Anopheles gambiae (Aga) aga7013 ENSANGP00000017618
Ashbya gossypii (Ago) ago624 ABR033C
Arabidopsis thaliana (Ath) ath9053 At2g21580.1
Arabidopsis thaliana (Ath) ath21600 At4g34555.1
Arabidopsis thaliana (Ath) ath22122 At4g39200.1
Caenorhabditis elegans (Cel) cel11629 K02B2.5
(CE04691;
WBGene00004494)
Candida glabrata (Cgl) cgl3000 CAGL0J00165g
Cryptococcus neoformans (Cne) cne3037 167.m03342
Dictyostelium discoideum (Ddi) ddi12013 DDB0215350
Debaryomyces hansenii (Dha) dha5276 DEHA0F20042g
Drosophila melanogaster (Dme) dme11999 CG6684-PA
(FBgn0010413)
Drosophila melanogaster (Dme) dme12000 CG6684-PB
(FBgn0010413)
Danio rerio (Dre) dre28712 ENSDARP00000004151
Danio rerio (Dre) dre22907 ENSDARP00000048290
Encephalitozoon cuniculi (Ecu) ecu262 19173431
Encephalitozoon cuniculi (Ecu) ecu265 19173434
Takifugu rubripes (Fru) fru4360 SINFRUP00000157545
Gallus gallus (Gga) gga13302 ENSGALP00000012461
Gallus gallus (Gga) gga13303 ENSGALP00000012462
(RPS25)
Homo sapiens (Hsa) hsa6658 ENSP00000236900
(RPS25)
P62851
Homo sapiens (Hsa) hsa25611 ENSP00000340469
Homo sapiens (Hsa) hsa5339 ENSP00000352086
Homo sapiens (Hsa) hsa3013 ENSP00000355329
Kluyveromyces lactis (Kla) kla809 KLLA0B06182g
Kluyveromyces lactis (Kla) kla810 KLLA0B06193g
Mus musculus (Mmu) mmu27485 ENSMUSP00000010071
Mus musculus (Mmu) mmu21148 ENSMUSP00000072501
Mus musculus (Mmu) mmu23025 ENSMUSP00000078906
Mus musculus (Mmu) mmu6269 ENSMUSP00000079167
Mus musculus (Mmu) mmu27484 ENSMUSP00000079180
(MGI:1922867)
P62852
Neurospora crassa (Ncr) ncr9228 NCU09476.2
Oryza sativa (Osa) osa44803 5623.m00448
Oryza sativa (Osa) osa47877 5653.m00124
Oryza sativa (Osa) osa86010 8755.m00152
Plasmodium falciparum (Pfa) pfa1603 PF14_0205
Rattus norvegicus (Rno) rno28459 ENSRNOP00000033144
(RGD:621043)
P62853
Saccharomyces cerevisiae (Sce) sce2388 YGR027C
(S000003259)
Saccharomyces cerevisiae (Sce) sce4446 YLR333C
(S000004325)
Schizosaccharomyces pombe (Spo) spo1085 SPAC694.05c P79009
Schizosaccharomyces pombe (Spo) spo3380 SPBC3D6.15 O74172
Yarrowia lipolytica (Yli) yli1876 YALI0C03872g


GO terms for OrthoMCL results:

GO ID GO term GO aspect Evidence codes and associations
GO:0005829 cytosol C
IDA
SpoSPAC694.05c
SPBC3D6.15
GO:0005840 ribosome C
ISS
AthAt2g21580
AT4G34555
At4g39200
GO:0005886 plasma membrane C
IDA
AthAt2g21580
GO:0022626 cytosolic ribosome C
IDA
AthAt4g39200
At2g21580
GO:0022627 cytosolic small ribosomal subunit C
IDA
AthAt2g21580
AT4G34555
At4g39200
SceS000003259
S000004325
ISO
MmuMGI:1922867
ISS
PfaPF14_0205
SpoSPAC694.05c
SPBC3D6.15
GO:0003735 structural constituent of ribosome F
IDA
SceS000003259
S000004325
ISO
MmuMGI:1922867
ISS
AthAT4G34555
At2g21580
At4g39200
PfaPF14_0205
SpoSPAC694.05c
SPBC3D6.15
GO:0000028 ribosomal small subunit assembly P
ISO
MmuMGI:1922867
GO:0006412 translation P
IC
SceS000003259
S000004325
ISS
AthAt2g21580
AT4G34555
At4g39200
PfaPF14_0205
SpoSPAC694.05c
SPBC3D6.15
GO:0009792 embryo development ending in birth or egg
hatching
P
IMP
CelWBGene00004494
GO:0040010 positive regulation of growth rate P
IMP
CelWBGene00004494

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Curated yeast ortholog results:

S. pombe
systematic ID
S. cerevisiae
systematic ID
SPAC694.05c
(P79009)
YLR333C
(S000004325)
SPBC3D6.15
(O74172)
YLR333C
(S000004325)


GO terms for curated homolog results:

GO ID GO term GO aspect Evidence codes and associations
GO:0005829 cytosol C
IDA
SpoSPAC694.05c
SPBC3D6.15
GO:0022627 cytosolic small ribosomal subunit C
IDA
SceS000004325
ISS
SpoSPAC694.05c
SPBC3D6.15
GO:0003735 structural constituent of ribosome F
IDA
SceS000004325
ISS
SpoSPAC694.05c
SPBC3D6.15
GO:0006412 translation P
IC
SceS000004325
ISS
SpoSPAC694.05c
SPBC3D6.15

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Search for gene by ID or name:

Query species:

Include wild-cards:   

Search for GO info:  

GO info in one table:

s.khadayate@ucl.ac.uk