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Search term: YLR335W

Gene summary:

Species Saccharomyces cerevisiae (Sce)
Primary name NUP2
SGD link S000004327
Alternative ID YLR335W
Description Nucleoporin involved in nucleocytoplasmic transport, binds to either the nucleoplasmic or cytoplasmic faces of the nuclear pore complex depending on Ran-GTP levels; also has a role in chromatin organization
Synonyms YLR335W
Datasets
KOGs
Inparanoid
HomoloGene
OrthoMCL
Curated

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GO info in one table:

HomoloGene results:

HomoloGene cluster Phylogenetic pattern
74757

Species Gene ID NCBI link UniProt link
Schizosaccharomyces pombe (Spo) nup61
(SPCC18B5.07c)		 GI:19075437 Q9USL4
Saccharomyces cerevisiae (Sce) NUP2
(S000004327)		 GI:6323367 P32499
Kluyveromyces lactis (Kla) KLLA0B06138g GI:50303731
Eremothecium gossypii (Ego) AGOS_ABR034W GI:45185263


GO terms for Homologene results:

GO ID GO term GO aspect Evidence codes and associations
GO:0000790 nuclear chromatin C
IDA
SceS000004327
GO:0005634 nucleus C
IDA
SpoSPCC18B5.07c
GO:0005643 nuclear pore C
IDA
SceS000004327
TAS
SpoSPCC18B5.07c
GO:0005739 mitochondrion C
IDA
SceS000004327
GO:0031965 nuclear membrane C
IDA
SpoSPCC18B5.07c
GO:0003674 molecular_function F
ND
SpoSPCC18B5.07c
GO:0005198 structural molecule activity F
TAS
SceS000004327
GO:0006348 chromatin silencing at telomere P
IMP
SceS000004327
GO:0006406 mRNA export from nucleus P
TAS
SceS000004327
GO:0006407 rRNA export from nucleus P
TAS
SceS000004327
GO:0006408 snRNA export from nucleus P
TAS
SceS000004327
GO:0006409 tRNA export from nucleus P
TAS
SceS000004327
GO:0006607 NLS-bearing substrate import into
nucleus		 P
TAS
SceS000004327
GO:0006608 snRNP protein import into nucleus P
TAS
SceS000004327
GO:0006609 mRNA-binding (hnRNP) protein import into
nucleus		 P
TAS
SceS000004327
GO:0006610 ribosomal protein import into nucleus P
TAS
SceS000004327
GO:0006611 protein export from nucleus P
TAS
SceS000004327
GO:0006612 protein targeting to membrane P
IMP
SceS000004327
GO:0006913 nucleocytoplasmic transport P
TAS
SpoSPCC18B5.07c
GO:0006999 nuclear pore organization P
TAS
SceS000004327
GO:0007094 mitotic cell cycle spindle assembly
checkpoint		 P
IMP
SpoSPCC18B5.07c
GO:0045184 establishment of protein localization P
RCA
SceS000004327
GO:0070481 nuclear-transcribed mRNA catabolic process,
non-stop decay		 P
IMP
SceS000004327

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OrthoMCL results:

Selected databases only

OrthoMCL cluster Phylogenetic pattern
OG1_10372

Species OrthoMCL
sequence		 Model organism
protein page		 UniProt link
Ashbya gossypii (Ago) ago625 ABR034W
Candida glabrata (Cgl) cgl1661 CAGL0G00902g
Cryptococcus neoformans (Cne) cne1985 181.m07966
Debaryomyces hansenii (Dha) dha5275 DEHA0F20020g
Kluyveromyces lactis (Kla) kla808 KLLA0B06138g
Neurospora crassa (Ncr) ncr6461 NCU06644.2
Saccharomyces cerevisiae (Sce) sce4448 YLR335W
(S000004327)
Schizosaccharomyces pombe (Spo) spo2847 SPCC18B5.07c Q9USL4
Yarrowia lipolytica (Yli) yli1875 YALI0C03850g


GO terms for OrthoMCL results:

GO ID GO term GO aspect Evidence codes and associations
GO:0000790 nuclear chromatin C
IDA
SceS000004327
GO:0005634 nucleus C
IDA
SpoSPCC18B5.07c
GO:0005643 nuclear pore C
IDA
SceS000004327
TAS
SpoSPCC18B5.07c
GO:0005739 mitochondrion C
IDA
SceS000004327
GO:0031965 nuclear membrane C
IDA
SpoSPCC18B5.07c
GO:0003674 molecular_function F
ND
SpoSPCC18B5.07c
GO:0005198 structural molecule activity F
TAS
SceS000004327
GO:0006348 chromatin silencing at telomere P
IMP
SceS000004327
GO:0006406 mRNA export from nucleus P
TAS
SceS000004327
GO:0006407 rRNA export from nucleus P
TAS
SceS000004327
GO:0006408 snRNA export from nucleus P
TAS
SceS000004327
GO:0006409 tRNA export from nucleus P
TAS
SceS000004327
GO:0006607 NLS-bearing substrate import into
nucleus		 P
TAS
SceS000004327
GO:0006608 snRNP protein import into nucleus P
TAS
SceS000004327
GO:0006609 mRNA-binding (hnRNP) protein import into
nucleus		 P
TAS
SceS000004327
GO:0006610 ribosomal protein import into nucleus P
TAS
SceS000004327
GO:0006611 protein export from nucleus P
TAS
SceS000004327
GO:0006612 protein targeting to membrane P
IMP
SceS000004327
GO:0006913 nucleocytoplasmic transport P
TAS
SpoSPCC18B5.07c
GO:0006999 nuclear pore organization P
TAS
SceS000004327
GO:0007094 mitotic cell cycle spindle assembly
checkpoint		 P
IMP
SpoSPCC18B5.07c
GO:0045184 establishment of protein localization P
RCA
SceS000004327
GO:0070481 nuclear-transcribed mRNA catabolic process,
non-stop decay		 P
IMP
SceS000004327

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Curated yeast ortholog results:

S. pombe
systematic ID		 S. cerevisiae
systematic ID
SPCC18B5.07c
(Q9USL4)		 YLR335W
(S000004327)


GO terms for curated homolog results:

GO ID GO term GO aspect Evidence codes and associations
GO:0000790 nuclear chromatin C
IDA
SceS000004327
GO:0005634 nucleus C
IDA
SpoSPCC18B5.07c
GO:0005643 nuclear pore C
IDA
SceS000004327
TAS
SpoSPCC18B5.07c
GO:0005739 mitochondrion C
IDA
SceS000004327
GO:0031965 nuclear membrane C
IDA
SpoSPCC18B5.07c
GO:0003674 molecular_function F
ND
SpoSPCC18B5.07c
GO:0005198 structural molecule activity F
TAS
SceS000004327
GO:0006348 chromatin silencing at telomere P
IMP
SceS000004327
GO:0006406 mRNA export from nucleus P
TAS
SceS000004327
GO:0006407 rRNA export from nucleus P
TAS
SceS000004327
GO:0006408 snRNA export from nucleus P
TAS
SceS000004327
GO:0006409 tRNA export from nucleus P
TAS
SceS000004327
GO:0006607 NLS-bearing substrate import into
nucleus		 P
TAS
SceS000004327
GO:0006608 snRNP protein import into nucleus P
TAS
SceS000004327
GO:0006609 mRNA-binding (hnRNP) protein import into
nucleus		 P
TAS
SceS000004327
GO:0006610 ribosomal protein import into nucleus P
TAS
SceS000004327
GO:0006611 protein export from nucleus P
TAS
SceS000004327
GO:0006612 protein targeting to membrane P
IMP
SceS000004327
GO:0006913 nucleocytoplasmic transport P
TAS
SpoSPCC18B5.07c
GO:0006999 nuclear pore organization P
TAS
SceS000004327
GO:0007094 mitotic cell cycle spindle assembly
checkpoint		 P
IMP
SpoSPCC18B5.07c
GO:0045184 establishment of protein localization P
RCA
SceS000004327
GO:0070481 nuclear-transcribed mRNA catabolic process,
non-stop decay		 P
IMP
SceS000004327

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