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Search term: YLR418C

Gene summary:

Species Saccharomyces cerevisiae (Sce)
Primary name CDC73
SGD link S000004410
Alternative ID YLR418C
Description Component of the Paf1p complex that binds to and modulates the activity of RNA polymerases I and II; required for expression of certain genes, modification of some histones, and telomere maintenance
Synonyms YLR418C
Datasets
KOGs
Inparanoid
HomoloGene
OrthoMCL
Curated

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Search for GO info:  

GO info in one table:

KOG results:

KOG name Phylogenetic pattern
(and link to KOGs with this pattern)
KOG3786 ACDHYPE

KOGs classification KOGs description
INFORMATION STORAGE AND PROCESSING RNA polymerase II assessory factor Cdc73p

Species KOG link NCBI link UniProt link
Arabidopsis thaliana (Ath) At3g22590 GI:15228799
Caenorhabditis elegans (Cel) CE24942 GI:17540148
Drosophila melanogaster (Dme) 7299132 GI:7299132
Drosophila melanogaster (Dme) 7303281 GI:7303281
Homo sapiens (Hsa) Hs16506830 GI:16506830
Saccharomyces cerevisiae (Sce) YLR418c
(S000004410)		 GI:6323450 Q06697
Schizosaccharomyces pombe (Spo) SPBC17G9.02c GI:19112683 Q9UUE7
Encephalitozoon cuniculi (Ecu) ECU09g1730 GI:19173294


GO terms for KOG results:

GO ID GO term GO aspect Evidence codes and associations
GO:0005634 nucleus C
IDA
AthAt3g22590
SceS000004410
SpoSPBC17G9.02c
GO:0005829 cytosol C
IDA
SpoSPBC17G9.02c
GO:0008023 transcription elongation factor
complex		 C
IPI
SceS000004410
GO:0016593 Cdc73/Paf1 complex C
IPI
SceS000004410
ISS
SpoSPBC17G9.02c
GO:0070860 RNA polymerase I core factor complex C
ISS
AthAt3g22590
GO:0005515 protein binding F
IPI
AthAt3g22590
GO:0016944 RNA polymerase II transcription elongation factor
activity		 F
IPI
SceS000004410
ISS
SpoSPBC17G9.02c
GO:0006310 DNA recombination P
IMP
SceS000004410
GO:0006362 RNA elongation from RNA polymerase I
promoter		 P
IMP
SceS000004410
GO:0006368 RNA elongation from RNA polymerase II
promoter		 P
IPI
SceS000004410
ISS
SpoSPBC17G9.02c
GO:0009911 positive regulation of flower development P
IMP
AthAt3g22590
GO:0010228 vegetative to reproductive phase transition of
meristem		 P
IMP
AthAt3g22590
GO:0016571 histone methylation P
IMP
SceS000004410
GO:0051568 histone H3-K4 methylation P
IMP
AthAt3g22590

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HomoloGene results:

HomoloGene cluster Phylogenetic pattern
31812

Species Gene ID NCBI link UniProt link
Schizosaccharomyces pombe (Spo) SPBC17G9.02c GI:19112683 Q9UUE7
Saccharomyces cerevisiae (Sce) CDC73
(S000004410)		 GI:6323450 Q06697
Kluyveromyces lactis (Kla) KLLA0D03036g GI:50306459
Eremothecium gossypii (Ego) AGOS_AER095W GI:45190701
Magnaporthe grisea (Mgr) MGG_11195 GI:145613600
Neurospora crassa (Ncr) NCU08322.1 GI:32417100


GO terms for Homologene results:

GO ID GO term GO aspect Evidence codes and associations
GO:0005634 nucleus C
IDA
SceS000004410
SpoSPBC17G9.02c
GO:0005829 cytosol C
IDA
SpoSPBC17G9.02c
GO:0008023 transcription elongation factor
complex		 C
IPI
SceS000004410
GO:0016593 Cdc73/Paf1 complex C
IPI
SceS000004410
ISS
SpoSPBC17G9.02c
GO:0016944 RNA polymerase II transcription elongation factor
activity		 F
IPI
SceS000004410
ISS
SpoSPBC17G9.02c
GO:0006310 DNA recombination P
IMP
SceS000004410
GO:0006362 RNA elongation from RNA polymerase I
promoter		 P
IMP
SceS000004410
GO:0006368 RNA elongation from RNA polymerase II
promoter		 P
IPI
SceS000004410
ISS
SpoSPBC17G9.02c
GO:0016571 histone methylation P
IMP
SceS000004410

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OrthoMCL results:

Selected databases only

OrthoMCL cluster Phylogenetic pattern
OG1_2073

Species OrthoMCL
sequence		 Model organism
protein page		 UniProt link
Anopheles gambiae (Aga) aga10950 ENSANGP00000013881
Anopheles gambiae (Aga) aga10949 ENSANGP00000028136
Ashbya gossypii (Ago) ago2600 AER095W
Arabidopsis thaliana (Ath) ath14572 At3g22590.1
Caenorhabditis elegans (Cel) cel8176 F35F11.1
(CE37230;
WBGene00018064)
Candida glabrata (Cgl) cgl3185 CAGL0J04510g
Cryptococcus neoformans (Cne) cne3089 167.m03394
Dictyostelium discoideum (Ddi) ddi3863 DDB0217530
Debaryomyces hansenii (Dha) dha2691 DEHA0D08954g
Drosophila melanogaster (Dme) dme11629 CG11990-PA
(FBgn0037657)
Drosophila melanogaster (Dme) dme4951 CG6220-PA
(FBgn0033865)
Danio rerio (Dre) dre17069 ENSDARP00000017639
(cdc73)		 Q7T3D4
Takifugu rubripes (Fru) fru16119 SINFRUP00000141924
Takifugu rubripes (Fru) fru16120 SINFRUP00000168681
Gallus gallus (Gga) gga22139 ENSGALP00000003888
(CDC73)		 Q5ZLM0
Gallus gallus (Gga) gga22140 ENSGALP00000003889
Homo sapiens (Hsa) hsa2770 ENSP00000256767
Kluyveromyces lactis (Kla) kla2202 KLLA0D03036g
Mus musculus (Mmu) mmu1174 ENSMUSP00000018337
(MGI:2384876)		 Q8JZM7
Neurospora crassa (Ncr) ncr8111 NCU08322.2
Oryza sativa (Osa) osa65812 6878.m00051
Oryza sativa (Osa) osa86217 8760.m00054
Oryza sativa (Osa) osa86224 8760.m00061
Oryza sativa (Osa) osa88074 9540.m00225
Oryza sativa (Osa) osa88097 9540.m00250
Rattus norvegicus (Rno) rno9208 ENSRNOP00000004495
(RGD:1311766)		 Q4V8C8
Saccharomyces cerevisiae (Sce) sce4541 YLR418C
(S000004410)
Schizosaccharomyces pombe (Spo) spo3706 SPBC17G9.02c Q9UUE7
Yarrowia lipolytica (Yli) yli153 YALI0A04345g


GO terms for OrthoMCL results:

GO ID GO term GO aspect Evidence codes and associations
GO:0005634 nucleus C
IDA
AthAt3g22590
SceS000004410
SpoSPBC17G9.02c
GO:0005829 cytosol C
IDA
SpoSPBC17G9.02c
GO:0008023 transcription elongation factor
complex		 C
IPI
SceS000004410
GO:0016593 Cdc73/Paf1 complex C
IPI
SceS000004410
ISS
SpoSPBC17G9.02c
GO:0043234 protein complex C
IPI
DmeFBgn0037657
GO:0070860 RNA polymerase I core factor complex C
ISS
AthAt3g22590
GO:0005515 protein binding F
IPI
AthAt3g22590
GO:0008134 transcription factor binding F
IPI
DmeFBgn0037657
GO:0016944 RNA polymerase II transcription elongation factor
activity		 F
IPI
SceS000004410
ISS
SpoSPBC17G9.02c
GO:0001745 compound eye morphogenesis P
IMP
DmeFBgn0037657
GO:0006310 DNA recombination P
IMP
SceS000004410
GO:0006362 RNA elongation from RNA polymerase I
promoter		 P
IMP
SceS000004410
GO:0006368 RNA elongation from RNA polymerase II
promoter		 P
IPI
SceS000004410
ISS
SpoSPBC17G9.02c
GO:0008407 bristle morphogenesis P
IMP
DmeFBgn0037657
GO:0008586 imaginal disc-derived wing vein
morphogenesis		 P
IMP
DmeFBgn0037657
GO:0008587 imaginal disc-derived wing margin
morphogenesis		 P
IMP
DmeFBgn0037657
GO:0009792 embryo development ending in birth or egg
hatching		 P
IMP
CelWBGene00018064
GO:0009911 positive regulation of flower development P
IMP
AthAt3g22590
GO:0010228 vegetative to reproductive phase transition of
meristem		 P
IMP
AthAt3g22590
GO:0016055 Wnt receptor signaling pathway P
IMP
DmeFBgn0037657
GO:0016571 histone methylation P
IMP
SceS000004410
GO:0035110 leg morphogenesis P
IMP
DmeFBgn0037657
GO:0045880 positive regulation of smoothened signaling
pathway		 P
IGI
DmeFBgn0037657
IMP
DmeFBgn0037657
GO:0045941 positive regulation of transcription P
IMP
DmeFBgn0037657
GO:0051568 histone H3-K4 methylation P
IMP
AthAt3g22590

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Curated yeast ortholog results:

S. pombe
systematic ID		 S. cerevisiae
systematic ID
SPBC17G9.02c
(Q9UUE7)		 YLR418C
(S000004410)


GO terms for curated homolog results:

GO ID GO term GO aspect Evidence codes and associations
GO:0005634 nucleus C
IDA
SceS000004410
SpoSPBC17G9.02c
GO:0005829 cytosol C
IDA
SpoSPBC17G9.02c
GO:0008023 transcription elongation factor
complex		 C
IPI
SceS000004410
GO:0016593 Cdc73/Paf1 complex C
IPI
SceS000004410
ISS
SpoSPBC17G9.02c
GO:0016944 RNA polymerase II transcription elongation factor
activity		 F
IPI
SceS000004410
ISS
SpoSPBC17G9.02c
GO:0006310 DNA recombination P
IMP
SceS000004410
GO:0006362 RNA elongation from RNA polymerase I
promoter		 P
IMP
SceS000004410
GO:0006368 RNA elongation from RNA polymerase II
promoter		 P
IPI
SceS000004410
ISS
SpoSPBC17G9.02c
GO:0016571 histone methylation P
IMP
SceS000004410

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GO info in one table:

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