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Search term: YLR435W

Gene summary:

Species Saccharomyces cerevisiae (Sce)
Primary name TSR2
SGD link S000004427
Alternative ID YLR435W
Description Protein with a potential role in pre-rRNA processing
Synonyms YLR435W
Datasets
KOGs
Inparanoid
HomoloGene
OrthoMCL
Curated

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KOG results:

KOG name Phylogenetic pattern
(and link to KOGs with this pattern)
KOG4032 ACDHYP-

KOGs classification KOGs description
POORLY CHARACTERIZED Uncharacterized conserved protein

Species KOG link NCBI link UniProt link
Arabidopsis thaliana (Ath) At3g22510 GI:15228772
Arabidopsis thaliana (Ath) At5g27990 GI:15241108
Caenorhabditis elegans (Cel) CE22340 GI:17543536
Drosophila melanogaster (Dme) 7301436 GI:7301436
Homo sapiens (Hsa) Hs14760337 GI:14760337
Saccharomyces cerevisiae (Sce) YLR435w
(S000004427)		 GI:6323466
Schizosaccharomyces pombe (Spo) SPBC409.15 GI:19112257 Q9UUA9


GO terms for KOG results:

GO ID GO term GO aspect Evidence codes and associations
GO:0005575 cellular_component C
ND
AthAt3g22510
At5g27990
GO:0005634 nucleus C
IDA
SceS000004427
SpoSPBC409.15
ISS
SpoSPBC409.15
GO:0005737 cytoplasm C
IDA
SceS000004427
ISS
SpoSPBC409.15
GO:0005829 cytosol C
IDA
SpoSPBC409.15
GO:0003674 molecular_function F
ND
AthAt5g27990
At3g22510
SceS000004427
SpoSPBC409.15
GO:0000462 maturation of SSU-rRNA from tricistronic rRNA
transcript (SSU-rRNA, 5.8S rRNA,
LSU-rRNA)		 P
IMP
SceS000004427
GO:0006399 tRNA metabolic process P
RCA
SceS000004427
GO:0008150 biological_process P
ND
AthAt5g27990
At3g22510
GO:0009451 RNA modification P
RCA
SceS000004427
GO:0030490 maturation of SSU-rRNA P
ISS
SpoSPBC409.15

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HomoloGene results:

HomoloGene cluster Phylogenetic pattern
39813

Species Gene ID NCBI link UniProt link
Saccharomyces cerevisiae (Sce) TSR2
(S000004427)		 GI:37362680
Kluyveromyces lactis (Kla) KLLA0B05467g GI:50303673
Magnaporthe grisea (Mgr) MGG_06517 GI:39977229
Neurospora crassa (Ncr) NCU03907.1 GI:32405226


GO terms for Homologene results:

GO ID GO term GO aspect Evidence codes and associations
GO:0005634 nucleus C
IDA
SceS000004427
GO:0005737 cytoplasm C
IDA
SceS000004427
GO:0003674 molecular_function F
ND
SceS000004427
GO:0000462 maturation of SSU-rRNA from tricistronic rRNA
transcript (SSU-rRNA, 5.8S rRNA,
LSU-rRNA)		 P
IMP
SceS000004427
GO:0006399 tRNA metabolic process P
RCA
SceS000004427
GO:0009451 RNA modification P
RCA
SceS000004427

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OrthoMCL results:

Selected databases only

OrthoMCL cluster Phylogenetic pattern
OG1_3604

Species OrthoMCL
sequence		 Model organism
protein page		 UniProt link
Anopheles gambiae (Aga) aga3238 ENSANGP00000012114
Ashbya gossypii (Ago) ago2624 AER119W
Arabidopsis thaliana (Ath) ath25075 At5g27990.1
Caenorhabditis elegans (Cel) cel19521 Y51H4A.15
(CE39855;
WBGene00013109)
Candida glabrata (Cgl) cgl4697 CAGL0M00946g
Cryptococcus neoformans (Cne) cne4371 177.m03123
Dictyostelium discoideum (Ddi) ddi2583 DDB0190875
Debaryomyces hansenii (Dha) dha2760 DEHA0D10461g
Drosophila melanogaster (Dme) dme14562 CG14543-PA
(FBgn0039404)
Danio rerio (Dre) dre1271 ENSDARP00000026184
(dt1p1a10l)		 Q6TH19
Takifugu rubripes (Fru) fru11690 SINFRUP00000150691
Homo sapiens (Hsa) hsa32853 ENSP00000289479
Kluyveromyces lactis (Kla) kla777 KLLA0B05467g
Mus musculus (Mmu) mmu29722 ENSMUSP00000026295
(MGI:1916749)		 Q8C8T8
Neurospora crassa (Ncr) ncr3796 NCU03907.2
Oryza sativa (Osa) osa75314 7192.m00096
Plasmodium falciparum (Pfa) pfa2573 PFA0315w
Rattus norvegicus (Rno) rno31184 ENSRNOP00000003540
(GI:317418)		 B0BN59
Saccharomyces cerevisiae (Sce) sce4558 YLR435W
(S000004427)
Schizosaccharomyces pombe (Spo) spo4225 SPBC409.15 Q9UUA9
Yarrowia lipolytica (Yli) yli4498 YALI0E15466g


GO terms for OrthoMCL results:

GO ID GO term GO aspect Evidence codes and associations
GO:0005575 cellular_component C
ND
AthAt5g27990
MmuMGI:1916749
GO:0005634 nucleus C
IDA
SceS000004427
SpoSPBC409.15
ISS
SpoSPBC409.15
GO:0005737 cytoplasm C
IDA
SceS000004427
ISS
SpoSPBC409.15
GO:0005829 cytosol C
IDA
SpoSPBC409.15
GO:0003674 molecular_function F
ND
AthAt5g27990
MmuMGI:1916749
SceS000004427
SpoSPBC409.15
GO:0000462 maturation of SSU-rRNA from tricistronic rRNA
transcript (SSU-rRNA, 5.8S rRNA,
LSU-rRNA)		 P
IMP
SceS000004427
GO:0002119 nematode larval development P
IMP
CelWBGene00013109
GO:0006399 tRNA metabolic process P
RCA
SceS000004427
GO:0006898 receptor-mediated endocytosis P
IMP
CelWBGene00013109
GO:0008150 biological_process P
ND
AthAt5g27990
MmuMGI:1916749
GO:0008340 determination of adult lifespan P
IMP
CelWBGene00013109
GO:0009451 RNA modification P
RCA
SceS000004427
GO:0009792 embryo development ending in birth or egg
hatching		 P
IMP
CelWBGene00013109
GO:0019915 lipid storage P
IMP
CelWBGene00013109
GO:0030490 maturation of SSU-rRNA P
ISS
SpoSPBC409.15
GO:0040007 growth P
IMP
CelWBGene00013109
GO:0040010 positive regulation of growth rate P
IMP
CelWBGene00013109
GO:0040017 positive regulation of locomotion P
IMP
CelWBGene00013109

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Curated yeast ortholog results:

S. pombe
systematic ID		 S. cerevisiae
systematic ID
SPBC409.15
(Q9UUA9)		 YLR435W
(S000004427)


GO terms for curated homolog results:

GO ID GO term GO aspect Evidence codes and associations
GO:0005634 nucleus C
IDA
SceS000004427
SpoSPBC409.15
ISS
SpoSPBC409.15
GO:0005737 cytoplasm C
IDA
SceS000004427
ISS
SpoSPBC409.15
GO:0005829 cytosol C
IDA
SpoSPBC409.15
GO:0003674 molecular_function F
ND
SceS000004427
SpoSPBC409.15
GO:0000462 maturation of SSU-rRNA from tricistronic rRNA
transcript (SSU-rRNA, 5.8S rRNA,
LSU-rRNA)		 P
IMP
SceS000004427
GO:0006399 tRNA metabolic process P
RCA
SceS000004427
GO:0009451 RNA modification P
RCA
SceS000004427
GO:0030490 maturation of SSU-rRNA P
ISS
SpoSPBC409.15

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