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Search term: YLR439W

Gene summary:

Species Saccharomyces cerevisiae (Sce)
Primary name MRPL4
SGD link S000004431
Alternative ID YLR439W
Description Mitochondrial ribosomal protein of the large subunit
Synonyms YLR439W
Datasets
KOGs
Inparanoid
HomoloGene
OrthoMCL
Curated

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GO info in one table:

KOG results:

KOG name Phylogenetic pattern
(and link to KOGs with this pattern)
KOG3331 ACD-YP-

KOGs classification KOGs description
INFORMATION STORAGE AND PROCESSING Mitochondrial/chloroplast ribosomal protein L4/L29

Species KOG link NCBI link UniProt link
Arabidopsis thaliana (Ath) At1g07830 GI:15223019
Caenorhabditis elegans (Cel) CE07706 GI:17505324
Drosophila melanogaster (Dme) 7299193 GI:17137104
Saccharomyces cerevisiae (Sce) YLR439w
(S000004431)		 GI:6323472 P36517
Schizosaccharomyces pombe (Spo) SPCC4G3.06c GI:19075332 P87232


GO terms for KOG results:

GO ID GO term GO aspect Evidence codes and associations
GO:0005739 mitochondrion C
IDA
SceS000004431
SpoSPCC4G3.06c
GO:0005762 mitochondrial large ribosomal subunit C
ISS
SpoSPCC4G3.06c
TAS
SceS000004431
GO:0005840 ribosome C
ISS
AthAt1g07830
GO:0003735 structural constituent of ribosome F
ISS
AthAt1g07830
SpoSPCC4G3.06c
TAS
SceS000004431
GO:0006412 translation P
ISS
AthAt1g07830
SpoSPCC4G3.06c
TAS
SceS000004431
GO:0032543 mitochondrial translation P
NAS
SpoSPCC4G3.06c

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HomoloGene results:

HomoloGene cluster Phylogenetic pattern
39816

Species Gene ID NCBI link UniProt link
Saccharomyces cerevisiae (Sce) MRPL4
(S000004431)		 GI:6323472 P36517
Kluyveromyces lactis (Kla) KLLA0B05181g GI:50303647
Eremothecium gossypii (Ego) AGOS_AER126W GI:45190731


GO terms for Homologene results:

GO ID GO term GO aspect Evidence codes and associations
GO:0005739 mitochondrion C
IDA
SceS000004431
GO:0005762 mitochondrial large ribosomal subunit C
TAS
SceS000004431
GO:0003735 structural constituent of ribosome F
TAS
SceS000004431
GO:0006412 translation P
TAS
SceS000004431

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OrthoMCL results:

Selected databases only

OrthoMCL cluster Phylogenetic pattern
OG1_2538

Species OrthoMCL
sequence		 Model organism
protein page		 UniProt link
Anopheles gambiae (Aga) aga4358 ENSANGP00000013554
Ashbya gossypii (Ago) ago2630 AER126W
Arabidopsis thaliana (Ath) ath775 At1g07830.1
Caenorhabditis elegans (Cel) cel253 B0261.4
(CE39547;
WBGene00015092)
Candida glabrata (Cgl) cgl4693 CAGL0M00858g
Cryptococcus neoformans (Cne) cne76 162.m02792
Dictyostelium discoideum (Ddi) ddi5545 DDB0185710
Debaryomyces hansenii (Dha) dha3472 DEHA0E05258g
Drosophila melanogaster (Dme) dme11715 CG9378-PA
(FBgn0014023)
Drosophila melanogaster (Dme) dme11714 CG9378-PB
(FBgn0014023)
Danio rerio (Dre) dre20418 ENSDARP00000026520
Danio rerio (Dre) dre20427 ENSDARP00000049746
Takifugu rubripes (Fru) fru16570 SINFRUP00000148718
Gallus gallus (Gga) gga23659 ENSGALP00000014750
(LOC775975)
Gallus gallus (Gga) gga23891 ENSGALP00000028202
Homo sapiens (Hsa) hsa23498 ENSP00000259038
(MRPL47)		 Q9HD33-2
Kluyveromyces lactis (Kla) kla763 KLLA0B05181g
Mus musculus (Mmu) mmu16475 ENSMUSP00000048078
(MGI:1921850)		 Q8K2Y7
Neurospora crassa (Ncr) ncr5132 NCU05287.2
Oryza sativa (Osa) osa15003 3024.m00137
Plasmodium falciparum (Pfa) pfa2804 PFC0675c
Rattus norvegicus (Rno) rno15904 ENSRNOP00000015863
(RGD:1307531)		 Q3B8R7
Saccharomyces cerevisiae (Sce) sce4564 YLR439W
(S000004431)
Schizosaccharomyces pombe (Spo) spo2895 SPCC4G3.06c P87232
Yarrowia lipolytica (Yli) yli1190 YALI0B11000g


GO terms for OrthoMCL results:

GO ID GO term GO aspect Evidence codes and associations
GO:0005739 mitochondrion C
IDA
MmuMGI:1921850
SceS000004431
SpoSPCC4G3.06c
GO:0005762 mitochondrial large ribosomal subunit C
ISS
DmeFBgn0014023
SpoSPCC4G3.06c
TAS
SceS000004431
GO:0005840 ribosome C
ISS
AthAt1g07830
GO:0003674 molecular_function F
ND
MmuMGI:1921850
GO:0003735 structural constituent of ribosome F
ISS
AthAt1g07830
DmeFBgn0014023
SpoSPCC4G3.06c
TAS
SceS000004431
GO:0000003 reproduction P
IMP
CelWBGene00015092
GO:0002119 nematode larval development P
IMP
CelWBGene00015092
GO:0006412 translation P
ISS
AthAt1g07830
SpoSPCC4G3.06c
TAS
SceS000004431
GO:0008150 biological_process P
ND
MmuMGI:1921850
GO:0008340 determination of adult lifespan P
IMP
CelWBGene00015092
GO:0009792 embryo development ending in birth or egg
hatching		 P
IMP
CelWBGene00015092
GO:0010171 body morphogenesis P
IMP
CelWBGene00015092
GO:0032543 mitochondrial translation P
NAS
SpoSPCC4G3.06c
GO:0040007 growth P
IMP
CelWBGene00015092
GO:0040010 positive regulation of growth rate P
IMP
CelWBGene00015092

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Curated yeast ortholog results:

S. pombe
systematic ID		 S. cerevisiae
systematic ID
SPCC4G3.06c
(P87232)		 YLR439W
(S000004431)


GO terms for curated homolog results:

GO ID GO term GO aspect Evidence codes and associations
GO:0005739 mitochondrion C
IDA
SceS000004431
SpoSPCC4G3.06c
GO:0005762 mitochondrial large ribosomal subunit C
ISS
SpoSPCC4G3.06c
TAS
SceS000004431
GO:0003735 structural constituent of ribosome F
ISS
SpoSPCC4G3.06c
TAS
SceS000004431
GO:0006412 translation P
ISS
SpoSPCC4G3.06c
TAS
SceS000004431
GO:0032543 mitochondrial translation P
NAS
SpoSPCC4G3.06c

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