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Search term: YLR441C

Gene summary:

Species Saccharomyces cerevisiae (Sce)
Primary name RPS1A
SGD link S000004433
Alternative ID YLR441C
Description Ribosomal protein 10 (rp10) of the small (40S) subunit; nearly identical to Rps1Bp and has similarity to rat S3a ribosomal protein
Synonyms YLR441C
Datasets
KOGs
Inparanoid
HomoloGene
OrthoMCL
Curated

Search for gene by ID or name:

Query species:

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Search for GO info:  

GO info in one table:

KOG results:

KOG name Phylogenetic pattern
(and link to KOGs with this pattern)
KOG1628 ACDHYPE

KOGs classification KOGs description
INFORMATION STORAGE AND PROCESSING 40S ribosomal protein S3A

Species KOG link NCBI link UniProt link
Arabidopsis thaliana (Ath) At3g04840 GI:15229364
Arabidopsis thaliana (Ath) At4g34670 GI:15236171
Caenorhabditis elegans (Cel) CE00664
(WBGene00004470)		 GI:17553700 P48154
Drosophila melanogaster (Dme) 7304341
(FBgn0017545)		 GI:17864162
Homo sapiens (Hsa) Hs13646076 GI:13646076
Homo sapiens (Hsa) Hs14733104 GI:14733104
Homo sapiens (Hsa) Hs14755682 GI:14755682
Homo sapiens (Hsa) Hs14785114 GI:14785114
Homo sapiens (Hsa) Hs17436140 GI:17436140
Homo sapiens (Hsa) Hs17436800 GI:17436800
Homo sapiens (Hsa) Hs17439150 GI:17439150
Homo sapiens (Hsa) Hs17441534 GI:17441534
Homo sapiens (Hsa) Hs17445110 GI:17445110
Homo sapiens (Hsa) Hs17445226 GI:17445226
Homo sapiens (Hsa) Hs17452434 GI:17452434
Homo sapiens (Hsa) Hs17466076 GI:17466076
Homo sapiens (Hsa) Hs17467750 GI:17467750
Homo sapiens (Hsa) Hs17472433 GI:17472433
Homo sapiens (Hsa) Hs17473048 GI:17473048
Homo sapiens (Hsa) Hs17473961 GI:17473961
Homo sapiens (Hsa) Hs18553396 GI:18553396
Homo sapiens (Hsa) Hs18573281 GI:18573281
Homo sapiens (Hsa) Hs20543864 GI:20543864
Homo sapiens (Hsa) Hs20545139 GI:20545139
Homo sapiens (Hsa) Hs22042810 GI:22042810
Homo sapiens (Hsa) Hs22044149_1 GI:22044149
Homo sapiens (Hsa) Hs22048068 GI:22048068
Homo sapiens (Hsa) Hs22050124 GI:22050124
Homo sapiens (Hsa) Hs22050159 GI:22050159
Homo sapiens (Hsa) Hs4506723
(RPS3A)		 GI:4506723 P61247
Saccharomyces cerevisiae (Sce) YLR441c
(S000004433)		 GI:6323474 P33442
Saccharomyces cerevisiae (Sce) YML063w
(S000004528)		 GI:6323577 P23248
Schizosaccharomyces pombe (Spo) SPAC13G6.02c GI:19113740 Q09781
Schizosaccharomyces pombe (Spo) SPAC22H12.04c GI:19114028 O94438
Encephalitozoon cuniculi (Ecu) ECU05g0250 GI:19173561 Q8SS05


GO terms for KOG results:

GO ID GO term GO aspect Evidence codes and associations
GO:0005618 cell wall C
IDA
AthAt4g34670
GO:0005634 nucleus C
ISS
HsaRPS3A
GO:0005730 nucleolus C
IDA
AthAt4g34670
HsaRPS3A
GO:0005737 cytoplasm C
IDA
HsaRPS3A
GO:0005811 lipid particle C
IDA
DmeFBgn0017545
GO:0005829 cytosol C
EXP
HsaRPS3A
IDA
SpoSPAC13G6.02c
SPAC22H12.04c
ISS
HsaRPS3A
GO:0005886 plasma membrane C
IDA
AthAt3g04840
At4g34670
GO:0009507 chloroplast C
IDA
AthAt3g04840
GO:0016020 membrane C
IDA
AthAt4g34670
GO:0022626 cytosolic ribosome C
IDA
AthAt4g34670
At3g04840
NAS
DmeFBgn0017545
GO:0022627 cytosolic small ribosomal subunit C
IDA
AthAt3g04840
At4g34670
HsaRPS3A
ISS
AthAt4g34670
At3g04840
DmeFBgn0017545
SpoSPAC13G6.02c
SPAC22H12.04c
NAS
DmeFBgn0017545
SceS000004528
S000004433
GO:0030529 ribonucleoprotein complex C
IDA
HsaRPS3A
GO:0030686 90S preribosome C
IDA
SceS000004433
S000004528
GO:0003723 RNA binding F
NAS
HsaRPS3A
GO:0003735 structural constituent of ribosome F
ISS
AthAt4g34670
At3g04840
DmeFBgn0017545
SpoSPAC22H12.04c
SPAC13G6.02c
NAS
DmeFBgn0017545
SceS000004433
S000004528
GO:0005515 protein binding F
IPI
HsaRPS3A
GO:0000003 reproduction P
IMP
CelWBGene00004470
GO:0000022 mitotic spindle elongation P
IMP
DmeFBgn0017545
GO:0000462 maturation of SSU-rRNA from tricistronic rRNA
transcript (SSU-rRNA, 5.8S rRNA,
LSU-rRNA)		 P
IGI
SceS000004433
S000004528
GO:0002119 nematode larval development P
IMP
CelWBGene00004470
GO:0006412 translation P
IC
HsaRPS3A
IMP
HsaRPS3A
ISS
AthAt3g04840
At4g34670
DmeFBgn0017545
SpoSPAC22H12.04c
SPAC13G6.02c
NAS
DmeFBgn0017545
HsaRPS3A
SceS000004433
S000004528
GO:0006413 translational initiation P
TAS
HsaRPS3A
GO:0006414 translational elongation P
EXP
HsaRPS3A
GO:0006417 regulation of translation P
RCA
SceS000004433
S000004528
GO:0006917 induction of apoptosis P
IMP
HsaRPS3A
GO:0007052 mitotic spindle organization P
IMP
DmeFBgn0017545
GO:0009792 embryo development ending in birth or egg
hatching		 P
IMP
CelWBGene00004470
GO:0018996 molting cycle, collagen and cuticulin-based
cuticle		 P
IMP
CelWBGene00004470
GO:0040007 growth P
IMP
CelWBGene00004470
GO:0040035 hermaphrodite genitalia development P
IMP
CelWBGene00004470
GO:0042254 ribosome biogenesis P
ISS
SpoSPAC13G6.02c
SPAC22H12.04c
GO:0048477 oogenesis P
NAS
DmeFBgn0017545

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HomoloGene results:

HomoloGene cluster Phylogenetic pattern
68112

Species Gene ID NCBI link UniProt link
Homo sapiens (Hsa) RPS3A GI:4506723 P61247
Pan troglodytes (Ptr) RPS3A GI:114596379
Canis familiaris (Cfa) RPS3A GI:73977921
Mus musculus (Mmu) Rps3a
(MGI:1202063)		 GI:31980669 P97351
Mus musculus (Mmu) Gm10119 GI:149265827
Mus musculus (Mmu) Gm9000 GI:94395665
Rattus norvegicus (Rno) Rps3a
(RGD:62078)		 GI:8394221
Gallus gallus (Gga) RCJMB04_13j13 GI:118089881
Drosophila melanogaster (Dme) RpS3A
(FBgn0017545)		 GI:17864162
Anopheles gambiae (Aga) AgaP_AGAP003532 GI:118783831
Caenorhabditis elegans (Cel) rps-1
(CE00664;
WBGene00004470)		 GI:17553700 P48154
Schizosaccharomyces pombe (Spo) rps1-1 GI:19113740
Schizosaccharomyces pombe (Spo) rps1-2 GI:19114028
Saccharomyces cerevisiae (Sce) RPS1B
(S000004528)		 GI:6323577 P23248
Saccharomyces cerevisiae (Sce) RPS1A
(S000004433)		 GI:6323474 P33442
Kluyveromyces lactis (Kla) KLLA0B05060g GI:50303635
Eremothecium gossypii (Ego) AGOS_AER131C GI:45190736
Magnaporthe grisea (Mgr) MGG_06919 GI:39978069
Neurospora crassa (Ncr) NCU01452.1 GI:32414823
Arabidopsis thaliana (Ath) AT4G34670 GI:15236171
Arabidopsis thaliana (Ath) AT3G04840 GI:15229364
Oryza sativa (Osa) Os03g0200500 GI:115451377
Oryza sativa (Osa) Os02g0287000 GI:115445597
Oryza sativa (Osa) Os12g0406200 GI:115488288
Plasmodium falciparum (Pfa) MAL3P7.35 GI:124505117


GO terms for Homologene results:

GO ID GO term GO aspect Evidence codes and associations
GO:0005618 cell wall C
IDA
AthAt4g34670
GO:0005634 nucleus C
IDA
MmuMGI:1202063
ISS
HsaRPS3A
GO:0005730 nucleolus C
IDA
AthAt4g34670
HsaRPS3A
GO:0005737 cytoplasm C
IDA
HsaRPS3A
GO:0005811 lipid particle C
IDA
DmeFBgn0017545
GO:0005829 cytosol C
EXP
HsaRPS3A
IDA
MmuMGI:1202063
ISS
HsaRPS3A
GO:0005886 plasma membrane C
IDA
AthAt3g04840
At4g34670
GO:0009507 chloroplast C
IDA
AthAt3g04840
GO:0016020 membrane C
IDA
AthAt4g34670
GO:0022626 cytosolic ribosome C
IDA
AthAt4g34670
At3g04840
NAS
DmeFBgn0017545
GO:0022627 cytosolic small ribosomal subunit C
IDA
AthAt3g04840
At4g34670
HsaRPS3A
ISO
MmuMGI:1202063
ISS
AthAt4g34670
At3g04840
DmeFBgn0017545
NAS
DmeFBgn0017545
SceS000004528
S000004433
GO:0030529 ribonucleoprotein complex C
IDA
HsaRPS3A
ISO
MmuMGI:1202063
GO:0030686 90S preribosome C
IDA
SceS000004433
S000004528
GO:0003723 RNA binding F
NAS
HsaRPS3A
GO:0003735 structural constituent of ribosome F
ISS
AthAt4g34670
At3g04840
DmeFBgn0017545
NAS
DmeFBgn0017545
SceS000004433
S000004528
GO:0005515 protein binding F
IPI
HsaRPS3A
MmuMGI:1202063
GO:0000003 reproduction P
IMP
CelWBGene00004470
GO:0000022 mitotic spindle elongation P
IMP
DmeFBgn0017545
GO:0000462 maturation of SSU-rRNA from tricistronic rRNA
transcript (SSU-rRNA, 5.8S rRNA,
LSU-rRNA)		 P
IGI
SceS000004433
S000004528
GO:0002119 nematode larval development P
IMP
CelWBGene00004470
GO:0006412 translation P
IC
HsaRPS3A
IMP
HsaRPS3A
ISS
AthAt3g04840
At4g34670
DmeFBgn0017545
NAS
DmeFBgn0017545
HsaRPS3A
SceS000004433
S000004528
GO:0006413 translational initiation P
TAS
HsaRPS3A
GO:0006414 translational elongation P
EXP
HsaRPS3A
GO:0006417 regulation of translation P
RCA
SceS000004433
S000004528
GO:0006917 induction of apoptosis P
IMP
HsaRPS3A
GO:0007052 mitotic spindle organization P
IMP
DmeFBgn0017545
GO:0009792 embryo development ending in birth or egg
hatching		 P
IMP
CelWBGene00004470
GO:0018996 molting cycle, collagen and cuticulin-based
cuticle		 P
IMP
CelWBGene00004470
GO:0040007 growth P
IMP
CelWBGene00004470
GO:0040035 hermaphrodite genitalia development P
IMP
CelWBGene00004470
GO:0048477 oogenesis P
NAS
DmeFBgn0017545

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OrthoMCL results:

Selected databases only

OrthoMCL cluster Phylogenetic pattern
OG1_935

Species OrthoMCL
sequence		 Model organism
protein page		 UniProt link
Anopheles gambiae (Aga) aga5965 ENSANGP00000010983
Ashbya gossypii (Ago) ago2635 AER131C
Arabidopsis thaliana (Ath) ath12530 At3g04840.1
Arabidopsis thaliana (Ath) ath21612 At4g34670.1
Caenorhabditis elegans (Cel) cel10641 F56F3.5
(CE00664;
WBGene00004470)
Candida glabrata (Cgl) cgl4691 CAGL0M00814g
Cryptococcus neoformans (Cne) cne5008 186.m03927
Dictyostelium discoideum (Ddi) ddi12266 DDB0230021
Debaryomyces hansenii (Dha) dha2757 DEHA0D10395g
Debaryomyces hansenii (Dha) dha4849 DEHA0F10527g
Drosophila melanogaster (Dme) dme15471 CG2168-PA
(FBgn0017545)
Danio rerio (Dre) dre547 ENSDARP00000017987
Encephalitozoon cuniculi (Ecu) ecu1123 19173561
Takifugu rubripes (Fru) fru1159 SINFRUP00000129833
Gallus gallus (Gga) gga17380 ENSGALP00000016361
(RCJMB04_13j13)
Homo sapiens (Hsa) hsa10719 ENSP00000343748
Homo sapiens (Hsa) hsa24731 ENSP00000346050
(RPS3A)		 P61247
Kluyveromyces lactis (Kla) kla757 KLLA0B05060g
Mus musculus (Mmu) mmu16844 ENSMUSP00000029722
(MGI:1202063)		 P97351
Mus musculus (Mmu) mmu8570 ENSMUSP00000073864
(GI:100043780)
Neurospora crassa (Ncr) ncr1408 NCU01452.2
Oryza sativa (Osa) osa7933 2530.m00229
Oryza sativa (Osa) osa28171 4226.m00154
Oryza sativa (Osa) osa52629 6105.m00137
Oryza sativa (Osa) osa77842 7476.m00140
Plasmodium falciparum (Pfa) pfa2880 PFC1020c
Rattus norvegicus (Rno) rno16307 ENSRNOP00000016329
(RGD:62078)		 P49242
Saccharomyces cerevisiae (Sce) sce4566 YLR441C
(S000004433)
Saccharomyces cerevisiae (Sce) sce4667 YML063W
(S000004528)
Schizosaccharomyces pombe (Spo) spo2263 SPAC13G6.02c Q09781
Schizosaccharomyces pombe (Spo) spo1828 SPAC22H12.04c O94438
Yarrowia lipolytica (Yli) yli5579 YALI0F05676g