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Search term: YML043C


Gene summary:

Species Saccharomyces cerevisiae (Sce)
Primary name RRN11
SGD link S000004507
Alternative ID YML043C
Description Component of the core factor (CF) rDNA transcription factor complex; CF is required for transcription of 35S rRNA genes by RNA polymerase I and is composed of Rrn6p, Rrn7p, and Rrn11p
Synonyms YML043C
Datasets
KOGs
Inparanoid
HomoloGene
OrthoMCL
Curated

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HomoloGene results:

HomoloGene cluster Phylogenetic pattern
48932

Species Gene ID NCBI link UniProt link
Saccharomyces cerevisiae (Sce) RRN11
(S000004507)
GI:6323598
Kluyveromyces lactis (Kla) KLLA0C05852g GI:50305001
Eremothecium gossypii (Ego) AGOS_ACL020W GI:45185668


GO terms for Homologene results:

GO ID GO term GO aspect Evidence codes and associations
GO:0070860 RNA polymerase I core factor complex C
IDA
SceS000004507
GO:0003701 RNA polymerase I transcription factor
activity
F
IDA
SceS000004507
IGI
SceS000004507
IMP
SceS000004507
GO:0010843 promoter binding F
NAS
SceS000004507
GO:0006360 transcription from RNA polymerase I
promoter
P
IDA
SceS000004507
GO:0006361 transcription initiation from RNA polymerase I
promoter
P
NAS
SceS000004507
GO:0006364 rRNA processing P
RCA
SceS000004507
GO:0042790 transcription of nuclear rRNA large RNA polymerase
I transcript
P
IGI
SceS000004507
IMP
SceS000004507

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OrthoMCL results:

Selected databases only

OrthoMCL cluster Phylogenetic pattern
OG1_20807

Species OrthoMCL
sequence
Model organism
protein page
UniProt link
Ashbya gossypii (Ago) ago1029 ACL020W
Candida glabrata (Cgl) cgl3511 CAGL0J11792g
Debaryomyces hansenii (Dha) dha3532 DEHA0E06611g
Kluyveromyces lactis (Kla) kla1457 KLLA0C05852g
Saccharomyces cerevisiae (Sce) sce4643 YML043C
(S000004507)
Schizosaccharomyces pombe (Spo) spo4930 SPBC725.17c O94332


GO terms for OrthoMCL results:

GO ID GO term GO aspect Evidence codes and associations
GO:0000120 RNA polymerase I transcription factor
complex
C
IDA
SpoSPBC725.17c
GO:0005634 nucleus C
IDA
SpoSPBC725.17c
GO:0005816 spindle pole body C
IDA
SpoSPBC725.17c
GO:0005819 spindle C
IDA
SpoSPBC725.17c
GO:0005829 cytosol C
IDA
SpoSPBC725.17c
GO:0032153 cell division site C
IDA
SpoSPBC725.17c
GO:0070860 RNA polymerase I core factor complex C
IDA
SceS000004507
GO:0003701 RNA polymerase I transcription factor
activity
F
IDA
SceS000004507
SpoSPBC725.17c
IGI
SceS000004507
IMP
SceS000004507
GO:0005515 protein binding F
IPI
SpoSPBC725.17c
GO:0010843 promoter binding F
NAS
SceS000004507
GO:0006360 transcription from RNA polymerase I
promoter
P
IDA
SceS000004507
SpoSPBC725.17c
GO:0006361 transcription initiation from RNA polymerase I
promoter
P
NAS
SceS000004507
GO:0006364 rRNA processing P
RCA
SceS000004507
GO:0042790 transcription of nuclear rRNA large RNA polymerase
I transcript
P
IGI
SceS000004507
IMP
SceS000004507

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Curated yeast ortholog results:

S. pombe
systematic ID
S. cerevisiae
systematic ID
SPBC725.17c
(O94332)
YML043C
(S000004507)


GO terms for curated homolog results:

GO ID GO term GO aspect Evidence codes and associations
GO:0000120 RNA polymerase I transcription factor
complex
C
IDA
SpoSPBC725.17c
GO:0005634 nucleus C
IDA
SpoSPBC725.17c
GO:0005816 spindle pole body C
IDA
SpoSPBC725.17c
GO:0005819 spindle C
IDA
SpoSPBC725.17c
GO:0005829 cytosol C
IDA
SpoSPBC725.17c
GO:0032153 cell division site C
IDA
SpoSPBC725.17c
GO:0070860 RNA polymerase I core factor complex C
IDA
SceS000004507
GO:0003701 RNA polymerase I transcription factor
activity
F
IDA
SceS000004507
SpoSPBC725.17c
IGI
SceS000004507
IMP
SceS000004507
GO:0005515 protein binding F
IPI
SpoSPBC725.17c
GO:0010843 promoter binding F
NAS
SceS000004507
GO:0006360 transcription from RNA polymerase I
promoter
P
IDA
SceS000004507
SpoSPBC725.17c
GO:0006361 transcription initiation from RNA polymerase I
promoter
P
NAS
SceS000004507
GO:0006364 rRNA processing P
RCA
SceS000004507
GO:0042790 transcription of nuclear rRNA large RNA polymerase
I transcript
P
IGI
SceS000004507
IMP
SceS000004507

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