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Search term: YML073C

Gene summary:

Species Saccharomyces cerevisiae (Sce)
Primary name RPL6A
SGD link S000004538
Alternative ID YML073C
Description N-terminally acetylated protein component of the large (60S) ribosomal subunit, has similarity to Rpl6Bp and to rat L6 ribosomal protein; binds to 5.8S rRNA
Synonyms YML073C
Datasets
KOGs
Inparanoid
HomoloGene
OrthoMCL
Curated

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GO info in one table:

KOG results:

KOG name Phylogenetic pattern
(and link to KOGs with this pattern)
KOG1694 ACDHYPE

KOGs classification KOGs description
INFORMATION STORAGE AND PROCESSING 60s ribosomal protein L6

Species KOG link NCBI link UniProt link
Arabidopsis thaliana (Ath) At1g18540 GI:15221798
Arabidopsis thaliana (Ath) At1g74050 GI:15221126
Arabidopsis thaliana (Ath) At1g74060 GI:15221127
Caenorhabditis elegans (Cel) CE00744
(WBGene00004417)		 GI:17554744 P47991
Drosophila melanogaster (Dme) 7302065 GI:7302065 Q9V9W2
Drosophila melanogaster (Dme) 7302066 GI:7302066 Q9V9W2
Homo sapiens (Hsa) Hs16753227
(RPL6)		 GI:16753227 Q02878
Homo sapiens (Hsa) Hs17442178 GI:17442178
Homo sapiens (Hsa) Hs17447583 GI:17447583
Homo sapiens (Hsa) Hs17452080 GI:17452080
Homo sapiens (Hsa) Hs17461487 GI:17461487
Homo sapiens (Hsa) Hs17485886 GI:17485886
Homo sapiens (Hsa) Hs17488983 GI:17488983
Homo sapiens (Hsa) Hs18598049 GI:18598049
Homo sapiens (Hsa) Hs20472258 GI:20472258
Homo sapiens (Hsa) Hs20535193 GI:20535193
Homo sapiens (Hsa) Hs20536593 GI:20536593
Homo sapiens (Hsa) Hs22041801 GI:22041801
Homo sapiens (Hsa) Hs22043930 GI:22043930
Homo sapiens (Hsa) Hs22045972 GI:22045972
Homo sapiens (Hsa) Hs22056018 GI:22056018
Homo sapiens (Hsa) Hs22059711 GI:22059711
Homo sapiens (Hsa) Hs22063764 GI:22063764
Saccharomyces cerevisiae (Sce) YLR448w
(S000004440)		 GI:6323481 P05739
Saccharomyces cerevisiae (Sce) YML073c
(S000004538)		 GI:6323567 Q02326
Schizosaccharomyces pombe (Spo) SPCC622.18 GI:19075690 P79071
Encephalitozoon cuniculi (Ecu) ECU08g1780 GI:19173503 Q8SR91


GO terms for KOG results:

GO ID GO term GO aspect Evidence codes and associations
GO:0005622 intracellular C
ISS
AthAt1g18540
At1g74050
At1g74060
GO:0005634 nucleus C
IDA
SpoSPCC622.18
GO:0005730 nucleolus C
IDA
AthAt1g74060
SpoSPCC622.18
GO:0005783 endoplasmic reticulum C
IDA
AthAt1g18540
GO:0005829 cytosol C
EXP
HsaRPL6
IDA
SpoSPCC622.18
GO:0005840 ribosome C
ISS
AthAt1g74050
At1g18540
At1g74060
GO:0005886 plasma membrane C
IDA
AthAt1g18540
At1g74050
GO:0009507 chloroplast C
IDA
AthAt1g18540
GO:0016020 membrane C
IDA
AthAt1g74050
At1g18540
GO:0022625 cytosolic large ribosomal subunit C
IDA
AthAt1g74050
At1g18540
At1g74060
SceS000004440
S000004538
ISS
SpoSPCC622.18
TAS
HsaRPL6
GO:0022626 cytosolic ribosome C
IDA
AthAt1g74060
At1g18540
GO:0003677 DNA binding F
TAS
HsaRPL6
GO:0003723 RNA binding F
IDA
SceS000004440
S000004538
TAS
HsaRPL6
GO:0003735 structural constituent of ribosome F
IDA
SceS000004440
S000004538
ISS
AthAt1g74050
At1g18540
At1g74060
SpoSPCC622.18
GO:0000003 reproduction P
IMP
CelWBGene00004417
GO:0000027 ribosomal large subunit assembly P
IMP
SceS000004440
S000004538
GO:0002119 nematode larval development P
IMP
CelWBGene00004417
GO:0006355 regulation of transcription, DNA-dependent P
TAS
HsaRPL6
GO:0006412 translation P
IDA
SceS000004440
S000004538
ISS
AthAt1g74050
At1g18540
At1g74060
SpoSPCC622.18
TAS
HsaRPL6
GO:0006414 translational elongation P
EXP
HsaRPL6
GO:0006417 regulation of translation P
RCA
SceS000004538
S000004440
GO:0008340 determination of adult lifespan P
IMP
CelWBGene00004417
GO:0009792 embryo development ending in birth or egg
hatching		 P
IMP
CelWBGene00004417
GO:0040007 growth P
IMP
CelWBGene00004417
GO:0040010 positive regulation of growth rate P
IMP
CelWBGene00004417
GO:0042254 ribosome biogenesis P
ISS
SpoSPCC622.18

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HomoloGene results:

HomoloGene cluster Phylogenetic pattern
31001

Species Gene ID NCBI link UniProt link
Homo sapiens (Hsa) RPL6 GI:16753227 Q02878
Pan troglodytes (Ptr) RPL6 GI:114647066
Canis familiaris (Cfa) RPL6 GI:73994633
Canis familiaris (Cfa) RPL6 GI:74007434
Mus musculus (Mmu) Rpl6
(MGI:108057)		 GI:84662736 P47911
Mus musculus (Mmu) Gm6136 GI:82880886
Mus musculus (Mmu) Gm6807 GI:149270558
Mus musculus (Mmu) Gm5428 GI:149261044
Gallus gallus (Gga) RPL6 GI:45383808
Drosophila melanogaster (Dme) RpL6
(FBgn0039857)		 GI:21357161
Anopheles gambiae (Aga) AgaP_AGAP001911 GI:158301465
Caenorhabditis elegans (Cel) rpl-6
(CE00744;
WBGene00004417)		 GI:17554744 P47991
Schizosaccharomyces pombe (Spo) rpl6
(SPCC622.18)		 GI:19075690 P79071
Saccharomyces cerevisiae (Sce) RPL6A
(S000004538)		 GI:6323567 Q02326
Saccharomyces cerevisiae (Sce) RPL6B
(S000004440)		 GI:6323481 P05739
Kluyveromyces lactis (Kla) KLLA0B04686g GI:50303601
Eremothecium gossypii (Ego) AGOS_AER149W GI:45190754
Magnaporthe grisea (Mgr) MGG_04444 GI:39944924
Neurospora crassa (Ncr) NCU02707.1 GI:32422925
Arabidopsis thaliana (Ath) AT1G74050 GI:15221126
Arabidopsis thaliana (Ath) AT1G18540 GI:15221798
Arabidopsis thaliana (Ath) AT1G74060 GI:15221127
Oryza sativa (Osa) Os04g0473400 GI:115458930
Oryza sativa (Osa) Os02g0591700 GI:115447017


GO terms for Homologene results:

GO ID GO term GO aspect Evidence codes and associations
GO:0005622 intracellular C
ISS
AthAt1g18540
At1g74050
At1g74060
GO:0005634 nucleus C
IDA
SpoSPCC622.18
ISA
MmuMGI:108057
GO:0005730 nucleolus C
IDA
AthAt1g74060
SpoSPCC622.18
ISA
MmuMGI:108057
GO:0005737 cytoplasm C
ISA
MmuMGI:108057
GO:0005783 endoplasmic reticulum C
IDA
AthAt1g18540
GO:0005811 lipid particle C
IDA
DmeFBgn0039857
GO:0005829 cytosol C
EXP
HsaRPL6
IDA
SpoSPCC622.18
GO:0005840 ribosome C
ISS
AthAt1g74050
At1g18540
At1g74060
GO:0005886 plasma membrane C
IDA
AthAt1g18540
At1g74050
GO:0009507 chloroplast C
IDA
AthAt1g18540
GO:0016020 membrane C
IDA
AthAt1g74050
At1g18540
GO:0022625 cytosolic large ribosomal subunit C
IDA
AthAt1g74050
At1g18540
At1g74060
SceS000004440
S000004538
ISS
DmeFBgn0039857
SpoSPCC622.18
TAS
HsaRPL6
GO:0022626 cytosolic ribosome C
IDA
AthAt1g74060
At1g18540
GO:0003674 molecular_function F
ND
MmuMGI:108057
GO:0003677 DNA binding F
TAS
HsaRPL6
GO:0003723 RNA binding F
IDA
SceS000004440
S000004538
TAS
HsaRPL6
GO:0003735 structural constituent of ribosome F
IDA
SceS000004440
S000004538
ISS
AthAt1g74050
At1g18540
At1g74060
SpoSPCC622.18
GO:0000003 reproduction P
IMP
CelWBGene00004417
GO:0000022 mitotic spindle elongation P
IMP
DmeFBgn0039857
GO:0000027 ribosomal large subunit assembly P
IMP
SceS000004440
S000004538
GO:0002119 nematode larval development P
IMP
CelWBGene00004417
GO:0006355 regulation of transcription, DNA-dependent P
TAS
HsaRPL6
GO:0006412 translation P
IDA
SceS000004440
S000004538
ISS
AthAt1g74050
At1g18540
At1g74060
SpoSPCC622.18
TAS
HsaRPL6
GO:0006414 translational elongation P
EXP
HsaRPL6
GO:0006417 regulation of translation P
RCA
SceS000004538
S000004440
GO:0007052 mitotic spindle organization P
IMP
DmeFBgn0039857
GO:0008150 biological_process P
ND
MmuMGI:108057
GO:0008340 determination of adult lifespan P
IMP
CelWBGene00004417
GO:0009792 embryo development ending in birth or egg
hatching		 P
IMP
CelWBGene00004417
GO:0040007 growth P
IMP
CelWBGene00004417
GO:0040010 positive regulation of growth rate P
IMP
CelWBGene00004417
GO:0042254 ribosome biogenesis P
ISS
SpoSPCC622.18

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OrthoMCL results:

Selected databases only

OrthoMCL cluster Phylogenetic pattern
OG1_1101

Species OrthoMCL
sequence		 Model organism
protein page		 UniProt link
Anopheles gambiae (Aga) aga4010 ENSANGP00000020813
Ashbya gossypii (Ago) ago2653 AER149W
Arabidopsis thaliana (Ath) ath1987 At1g18540.1
Arabidopsis thaliana (Ath) ath6712 At1g74050.1
Arabidopsis thaliana (Ath) ath6714 At1g74060.1
Caenorhabditis elegans (Cel) cel14055 R151.3
(CE00744;
WBGene00004417)
Candida glabrata (Cgl) cgl4574 CAGL0L11462g
Cryptococcus neoformans (Cne) cne3375 167.m05882
Dictyostelium discoideum (Ddi) ddi13482 DDB0231338
Debaryomyces hansenii (Dha) dha2755 DEHA0D10351g
Drosophila melanogaster (Dme) dme15386 CG11522-PA
(FBgn0039857)
Drosophila melanogaster (Dme) dme15387 CG11522-PB
(FBgn0039857)
Danio rerio (Dre) dre26735 ENSDARP00000018527
Encephalitozoon cuniculi (Ecu) ecu334 19173503
Takifugu rubripes (Fru) fru10095 SINFRUP00000154967
Gallus gallus (Gga) gga7283 ENSGALP00000007680
(RPL6)		 Q8UWG7
Homo sapiens (Hsa) hsa8220 ENSP00000202773
(RPL6)		 Q02878
Kluyveromyces lactis (Kla) kla740 KLLA0B04686g
Mus musculus (Mmu) mmu20842 ENSMUSP00000031617
(MGI:108057)		 P47911
Mus musculus (Mmu) mmu2829 ENSMUSP00000072891
Mus musculus (Mmu) mmu13821 ENSMUSP00000076642
Neurospora crassa (Ncr) ncr2623 NCU02707.2
Oryza sativa (Osa) osa50505 5852.m00022
Oryza sativa (Osa) osa58035 6456.m00242
Oryza sativa (Osa) osa85786 8338.m00139
Plasmodium falciparum (Pfa) pfa4397 PF13_0213
Rattus norvegicus (Rno) rno13109 ENSRNOP00000020807
Rattus norvegicus (Rno) rno8636 ENSRNOP00000038065
(RGD:619826)		 P21533
Rattus norvegicus (Rno) rno19311 ENSRNOP00000043390
Rattus norvegicus (Rno) rno25601 ENSRNOP00000051135
(RGD:1563476)
Saccharomyces cerevisiae (Sce) sce4573 YLR448W
(S000004440)
Saccharomyces cerevisiae (Sce) sce4677 YML073C
(S000004538)
Schizosaccharomyces pombe (Spo) spo1500 SPCC622.18 P79071
Yarrowia lipolytica (Yli) yli5010 YALI0E27830g


GO terms for OrthoMCL results:

GO ID GO term GO aspect Evidence codes and associations
GO:0005622 intracellular C
ISS
AthAt1g18540
At1g74050
At1g74060
GO:0005634 nucleus C
IDA
SpoSPCC622.18
ISA
MmuMGI:108057
GO:0005730 nucleolus C
IDA
AthAt1g74060
SpoSPCC622.18
ISA
MmuMGI:108057
GO:0005737 cytoplasm C
ISA
MmuMGI:108057
GO:0005783 endoplasmic reticulum C
IDA
AthAt1g18540
GO:0005811 lipid particle C
IDA
DmeFBgn0039857
GO:0005829 cytosol C
IDA
SpoSPCC622.18
GO:0005840 ribosome C
ISS
AthAt1g74050
At1g18540
At1g74060
GO:0005886 plasma membrane C
IDA
AthAt1g18540
At1g74050
GO:0009507 chloroplast C
IDA
AthAt1g18540
GO:0016020 membrane C
IDA
AthAt1g74050
At1g18540
GO:0022625 cytosolic large ribosomal subunit C
IDA
AthAt1g74050
At1g18540
At1g74060
SceS000004440
S000004538
ISS
DmeFBgn0039857
PfaPF13_0213
SpoSPCC622.18
GO:0022626 cytosolic ribosome C
IDA
AthAt1g74060
At1g18540
GO:0003674 molecular_function F
ND
MmuMGI:108057
GO:0003723 RNA binding F
IDA
SceS000004440
S000004538
GO:0003735 structural constituent of ribosome F
IDA
SceS000004440
S000004538
ISS
AthAt1g74050
At1g18540
At1g74060
SpoSPCC622.18
GO:0000003 reproduction P
IMP
CelWBGene00004417
GO:0000022 mitotic spindle elongation P
IMP
DmeFBgn0039857
GO:0000027 ribosomal large subunit assembly P
IMP
SceS000004440
S000004538
GO:0002119 nematode larval development P
IMP
CelWBGene00004417
GO:0006412 translation P
IDA
SceS000004440
S000004538
ISS
AthAt1g74050
At1g18540
At1g74060
SpoSPCC622.18
GO:0006417 regulation of translation P
RCA
SceS000004538
S000004440
GO:0007052 mitotic spindle organization P
IMP
DmeFBgn0039857
GO:0008150 biological_process P
ND
MmuMGI:108057
GO:0008340 determination of adult lifespan P
IMP
CelWBGene00004417
GO:0009792 embryo development ending in birth or egg
hatching		 P
IMP
CelWBGene00004417
GO:0040007 growth P
IMP
CelWBGene00004417
GO:0040010 positive regulation of growth rate P
IMP
CelWBGene00004417
GO:0042254 ribosome biogenesis P
ISS
SpoSPCC622.18

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Curated yeast ortholog results:

S. pombe
systematic ID		 S. cerevisiae
systematic ID
SPCC622.18
(P79071)		 YML073C
(S000004538)


GO terms for curated homolog results:

GO ID GO term GO aspect Evidence codes and associations
GO:0005634 nucleus C
IDA
SpoSPCC622.18
GO:0005730 nucleolus C
IDA
SpoSPCC622.18
GO:0005829 cytosol C
IDA
SpoSPCC622.18
GO:0022625 cytosolic large ribosomal subunit C
IDA
SceS000004538
ISS
SpoSPCC622.18
GO:0003723 RNA binding F
IDA
SceS000004538
GO:0003735 structural constituent of ribosome F
IDA
SceS000004538
ISS
SpoSPCC622.18
GO:0000027 ribosomal large subunit assembly P
IMP
SceS000004538
GO:0006412 translation P
IDA
SceS000004538
ISS
SpoSPCC622.18
GO:0006417 regulation of translation P
RCA
SceS000004538
GO:0042254 ribosome biogenesis P
ISS
SpoSPCC622.18

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