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Search term: YML078W

Gene summary:

Species Saccharomyces cerevisiae (Sce)
Primary name CPR3
SGD link S000004543
Alternative ID YML078W
Description Mitochondrial peptidyl-prolyl cis-trans isomerase (cyclophilin), catalyzes the cis-trans isomerization of peptide bonds N-terminal to proline residues; involved in protein refolding after import into mitochondria
Synonyms YML078W
Datasets
KOGs
Inparanoid
HomoloGene
OrthoMCL
Curated

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GO info in one table:

KOG results:

KOG name Phylogenetic pattern
(and link to KOGs with this pattern)
KOG0865 ACDHYPE

KOGs classification KOGs description
CELLULAR PROCESSES AND SIGNALING Cyclophilin type peptidyl-prolyl cis-trans isomerase

Species KOG link NCBI link UniProt link
Arabidopsis thaliana (Ath) At1g74070 GI:12325145
Arabidopsis thaliana (Ath) At2g16600 GI:15227259
Arabidopsis thaliana (Ath) At2g21130 GI:15226467
Arabidopsis thaliana (Ath) At2g29960 GI:15227674
Arabidopsis thaliana (Ath) At3g22920 GI:15228892
Arabidopsis thaliana (Ath) At3g55920 GI:11270308
Arabidopsis thaliana (Ath) At3g56070 GI:15228814
Arabidopsis thaliana (Ath) At3g63400 GI:15229425
Arabidopsis thaliana (Ath) At4g32420 GI:15236788
Arabidopsis thaliana (Ath) At4g34870 GI:15236211
Arabidopsis thaliana (Ath) At4g34960 GI:15236227
Arabidopsis thaliana (Ath) At4g38740 GI:15234781
Arabidopsis thaliana (Ath) At5g35100 GI:15238397
Arabidopsis thaliana (Ath) At5g58710 GI:15237739
Caenorhabditis elegans (Cel) CE16730
(WBGene00000878)		 GI:17552782 P52010
Caenorhabditis elegans (Cel) CE20371
(WBGene00000883)		 GI:17566266 P52015
Caenorhabditis elegans (Cel) CE20374
(WBGene00000879)		 GI:17559074 P52011
Caenorhabditis elegans (Cel) CE21394 GI:17542996
Caenorhabditis elegans (Cel) CE22213
(WBGene00000877)		 GI:17565860 P52009
Caenorhabditis elegans (Cel) CE28157 GI:17559076
Drosophila melanogaster (Dme) 7290636 GI:7290636
Drosophila melanogaster (Dme) 7291787 GI:19922896
Drosophila melanogaster (Dme) 7293206 GI:17647299
Drosophila melanogaster (Dme) 7294404 GI:7294404
Drosophila melanogaster (Dme) 7301354 GI:7301354
Drosophila melanogaster (Dme) 7303996_2 GI:7303996
Homo sapiens (Hsa) Hs10863927
(PPIA)		 GI:10863927 Q71V99
Homo sapiens (Hsa) Hs17434343 GI:17434343
Homo sapiens (Hsa) Hs17437157 GI:17437157
Homo sapiens (Hsa) Hs17438252 GI:17438252
Homo sapiens (Hsa) Hs17440554 GI:17440554
Homo sapiens (Hsa) Hs17440821 GI:17440821
Homo sapiens (Hsa) Hs17442409 GI:17442409
Homo sapiens (Hsa) Hs17443003 GI:17443003
Homo sapiens (Hsa) Hs17446496 GI:17446496
Homo sapiens (Hsa) Hs17449989 GI:17449989
Homo sapiens (Hsa) Hs17450333 GI:17450333
Homo sapiens (Hsa) Hs17454261 GI:17454261
Homo sapiens (Hsa) Hs17454657 GI:17454657
Homo sapiens (Hsa) Hs17458599 GI:17458599
Homo sapiens (Hsa) Hs17461554 GI:17461554
Homo sapiens (Hsa) Hs17464964 GI:17464964
Homo sapiens (Hsa) Hs17466183 GI:17466183
Homo sapiens (Hsa) Hs17467527 GI:17467527
Homo sapiens (Hsa) Hs17467945 GI:17467945
Homo sapiens (Hsa) Hs17470354 GI:17470354
Homo sapiens (Hsa) Hs17474134 GI:17474134
Homo sapiens (Hsa) Hs17475590 GI:17475590
Homo sapiens (Hsa) Hs17476304 GI:17476304
Homo sapiens (Hsa) Hs17476898 GI:17476898
Homo sapiens (Hsa) Hs17482743 GI:17482743
Homo sapiens (Hsa) Hs17482946 GI:17482946
Homo sapiens (Hsa) Hs17483611 GI:17483611
Homo sapiens (Hsa) Hs17489692 GI:17489692
Homo sapiens (Hsa) Hs18552292 GI:18552292
Homo sapiens (Hsa) Hs18552987 GI:18552987
Homo sapiens (Hsa) Hs18553153 GI:18553153
Homo sapiens (Hsa) Hs18576596 GI:18576596
Homo sapiens (Hsa) Hs18584979 GI:18584979
Homo sapiens (Hsa) Hs18600882 GI:18562637
Homo sapiens (Hsa) Hs18604743 GI:18604743
Homo sapiens (Hsa) Hs20472905 GI:20472905
Homo sapiens (Hsa) Hs20535081_1 GI:20535081
Homo sapiens (Hsa) Hs20536631 GI:20536631
Homo sapiens (Hsa) Hs20537472 GI:20537472
Homo sapiens (Hsa) Hs20539222 GI:20539222
Homo sapiens (Hsa) Hs20539814 GI:20539814
Homo sapiens (Hsa) Hs20543399 GI:20543399
Homo sapiens (Hsa) Hs20543568 GI:20543568
Homo sapiens (Hsa) Hs20545277 GI:20545277
Homo sapiens (Hsa) Hs22040991 GI:22040991
Homo sapiens (Hsa) Hs22041672 GI:22041672
Homo sapiens (Hsa) Hs22042089 GI:22042089
Homo sapiens (Hsa) Hs22042822 GI:22042822
Homo sapiens (Hsa) Hs22043698 GI:22043698
Homo sapiens (Hsa) Hs22044176 GI:22044176
Homo sapiens (Hsa) Hs22046034 GI:22046034
Homo sapiens (Hsa) Hs22046090 GI:22046090
Homo sapiens (Hsa) Hs22046092 GI:22046092
Homo sapiens (Hsa) Hs22047008 GI:22047008
Homo sapiens (Hsa) Hs22049519 GI:22049519
Homo sapiens (Hsa) Hs22053205 GI:22053205
Homo sapiens (Hsa) Hs22053770 GI:22053770
Homo sapiens (Hsa) Hs22059571_1 GI:22059571
Homo sapiens (Hsa) Hs22060580 GI:22060580
Homo sapiens (Hsa) Hs22060926 GI:22060926
Homo sapiens (Hsa) Hs22062930 GI:22062930
Homo sapiens (Hsa) Hs22066261 GI:22066261
Homo sapiens (Hsa) Hs22070317 GI:22070317
Homo sapiens (Hsa) Hs5031987
(PPIF)		 GI:5031987 P30405
Homo sapiens (Hsa) Hs6382079_2 GI:6382079
Saccharomyces cerevisiae (Sce) YDR155c
(S000002562)		 GI:6320359 P14832
Saccharomyces cerevisiae (Sce) YML078w
(S000004543)		 GI:6323562 P25719
Schizosaccharomyces pombe (Spo) SPBC28F2.03 GI:19112456 P18253
Encephalitozoon cuniculi (Ecu) ECU08g0470 GI:19173373 Q8SRE1
Encephalitozoon cuniculi (Ecu) ECU10g1760 GI:19074787 Q8SQZ8
Arabidopsis thaliana (Ath) At1g74070 GI:12325145
Arabidopsis thaliana (Ath) At2g16600 GI:15227259
Arabidopsis thaliana (Ath) At2g21130 GI:15226467
Arabidopsis thaliana (Ath) At2g29960 GI:15227674
Arabidopsis thaliana (Ath) At3g22920 GI:15228892
Arabidopsis thaliana (Ath) At3g55920 GI:11270308
Arabidopsis thaliana (Ath) At3g56070 GI:15228814
Arabidopsis thaliana (Ath) At3g63400 GI:15229425
Arabidopsis thaliana (Ath) At4g32420 GI:15236788
Arabidopsis thaliana (Ath) At4g34870 GI:15236211
Arabidopsis thaliana (Ath) At4g34960 GI:15236227
Arabidopsis thaliana (Ath) At4g38740 GI:15234781
Arabidopsis thaliana (Ath) At5g35100 GI:15238397
Arabidopsis thaliana (Ath) At5g58710 GI:15237739
Caenorhabditis elegans (Cel) CE16730
(WBGene00000878)		 GI:17552782 P52010
Caenorhabditis elegans (Cel) CE20371
(WBGene00000883)		 GI:17566266 P52015
Caenorhabditis elegans (Cel) CE20374
(WBGene00000879)		 GI:17559074 P52011
Caenorhabditis elegans (Cel) CE21394 GI:17542996
Caenorhabditis elegans (Cel) CE22213
(WBGene00000877)		 GI:17565860 P52009
Caenorhabditis elegans (Cel) CE28157 GI:17559076
Drosophila melanogaster (Dme) 7290636 GI:7290636
Drosophila melanogaster (Dme) 7291787 GI:19922896
Drosophila melanogaster (Dme) 7293206 GI:17647299
Drosophila melanogaster (Dme) 7294404 GI:7294404
Drosophila melanogaster (Dme) 7301354 GI:7301354
Drosophila melanogaster (Dme) 7303996_2 GI:7303996
Homo sapiens (Hsa) Hs10863927
(PPIA)		 GI:10863927 Q71V99
Homo sapiens (Hsa) Hs17434343 GI:17434343
Homo sapiens (Hsa) Hs17437157 GI:17437157
Homo sapiens (Hsa) Hs17438252 GI:17438252
Homo sapiens (Hsa) Hs17440554 GI:17440554
Homo sapiens (Hsa) Hs17440821 GI:17440821
Homo sapiens (Hsa) Hs17442409 GI:17442409
Homo sapiens (Hsa) Hs17443003 GI:17443003
Homo sapiens (Hsa) Hs17446496 GI:17446496
Homo sapiens (Hsa) Hs17449989 GI:17449989
Homo sapiens (Hsa) Hs17450333 GI:17450333
Homo sapiens (Hsa) Hs17454261 GI:17454261
Homo sapiens (Hsa) Hs17454657 GI:17454657
Homo sapiens (Hsa) Hs17458599 GI:17458599
Homo sapiens (Hsa) Hs17461554 GI:17461554
Homo sapiens (Hsa) Hs17464964 GI:17464964
Homo sapiens (Hsa) Hs17466183 GI:17466183
Homo sapiens (Hsa) Hs17467527 GI:17467527
Homo sapiens (Hsa) Hs17467945 GI:17467945
Homo sapiens (Hsa) Hs17470354 GI:17470354
Homo sapiens (Hsa) Hs17474134 GI:17474134
Homo sapiens (Hsa) Hs17475590 GI:17475590
Homo sapiens (Hsa) Hs17476304 GI:17476304
Homo sapiens (Hsa) Hs17476898 GI:17476898
Homo sapiens (Hsa) Hs17482743 GI:17482743
Homo sapiens (Hsa) Hs17482946 GI:17482946
Homo sapiens (Hsa) Hs17483611 GI:17483611
Homo sapiens (Hsa) Hs17489692 GI:17489692
Homo sapiens (Hsa) Hs18552292 GI:18552292
Homo sapiens (Hsa) Hs18552987 GI:18552987
Homo sapiens (Hsa) Hs18553153 GI:18553153
Homo sapiens (Hsa) Hs18576596 GI:18576596
Homo sapiens (Hsa) Hs18584979 GI:18584979
Homo sapiens (Hsa) Hs18600882 GI:18562637
Homo sapiens (Hsa) Hs18604743 GI:18604743
Homo sapiens (Hsa) Hs20472905 GI:20472905
Homo sapiens (Hsa) Hs20535081_1 GI:20535081
Homo sapiens (Hsa) Hs20536631 GI:20536631
Homo sapiens (Hsa) Hs20537472 GI:20537472
Homo sapiens (Hsa) Hs20539222 GI:20539222
Homo sapiens (Hsa) Hs20539814 GI:20539814
Homo sapiens (Hsa) Hs20543399 GI:20543399
Homo sapiens (Hsa) Hs20543568 GI:20543568
Homo sapiens (Hsa) Hs20545277 GI:20545277
Homo sapiens (Hsa) Hs22040991 GI:22040991
Homo sapiens (Hsa) Hs22041672 GI:22041672
Homo sapiens (Hsa) Hs22042089 GI:22042089
Homo sapiens (Hsa) Hs22042822 GI:22042822
Homo sapiens (Hsa) Hs22043698 GI:22043698
Homo sapiens (Hsa) Hs22044176 GI:22044176
Homo sapiens (Hsa) Hs22046034 GI:22046034
Homo sapiens (Hsa) Hs22046090 GI:22046090
Homo sapiens (Hsa) Hs22046092 GI:22046092
Homo sapiens (Hsa) Hs22047008 GI:22047008
Homo sapiens (Hsa) Hs22049519 GI:22049519
Homo sapiens (Hsa) Hs22053205 GI:22053205
Homo sapiens (Hsa) Hs22053770 GI:22053770
Homo sapiens (Hsa) Hs22059571_1 GI:22059571
Homo sapiens (Hsa) Hs22060580 GI:22060580
Homo sapiens (Hsa) Hs22060926 GI:22060926
Homo sapiens (Hsa) Hs22062930 GI:22062930
Homo sapiens (Hsa) Hs22066261 GI:22066261
Homo sapiens (Hsa) Hs22070317 GI:22070317
Homo sapiens (Hsa) Hs5031987
(PPIF)		 GI:5031987 P30405
Homo sapiens (Hsa) Hs6382079_2 GI:6382079
Saccharomyces cerevisiae (Sce) YDR155c
(S000002562)		 GI:6320359 P14832
Saccharomyces cerevisiae (Sce) YML078w
(S000004543)		 GI:6323562 P25719
Schizosaccharomyces pombe (Spo) SPBC28F2.03 GI:19112456 P18253
Encephalitozoon cuniculi (Ecu) ECU08g0470 GI:19173373 Q8SRE1
Encephalitozoon cuniculi (Ecu) ECU10g1760 GI:19074787 Q8SQZ8


GO terms for KOG results:

GO ID GO term GO aspect Evidence codes and associations
GO:0000118 histone deacetylase complex C
IPI
SceS000002562
GO:0005575 cellular_component C
ND
AthAt3g63400
At3g22920
GO:0005576 extracellular region C
EXP
HsaPPIA
GO:0005623 cell C
IDA
CelWBGene00000879
GO:0005624 membrane fraction C
IDA
AthAt2g29960
TAS
HsaPPIF
GO:0005634 nucleus C
IDA
HsaPPIA
SceS000002562
SpoSPBC28F2.03
GO:0005739 mitochondrion C
IDA
SceS000004543
S000002562
GO:0005771 multivesicular body C
IDA
AthAt2g29960
GO:0005783 endoplasmic reticulum C
IDA
AthAt2g29960
GO:0005794 Golgi apparatus C
IDA
AthAt4g34960
GO:0005795 Golgi stack C
IDA
AthAt2g29960
GO:0005829 cytosol C
EXP
HsaPPIA
IDA
AthAt2g29960
HsaPPIA
SpoSPBC28F2.03
ISS
AthAt3g56070
At2g16600
At4g34870
At4g38740
GO:0005886 plasma membrane C
IDA
AthAt2g21130
At2g16600
At4g34870
At3g55920
At4g38740
GO:0009507 chloroplast C
IDA
AthAt4g34870
At2g16600
At5g35100
At5g58710
At1g74070
GO:0009543 chloroplast thylakoid lumen C
ISS
AthAt1g74070
GO:0031977 thylakoid lumen C
IDA
AthAt5g35100
GO:0034967 Set3 complex C
IDA
SceS000002562
GO:0048046 apoplast C
IDA
AthAt4g34870
At4g38740
GO:0003755 peptidyl-prolyl cis-trans isomerase
activity		 F
IDA
AthAt2g29960
CelWBGene00000879
SceS000004543
S000002562
ISS
AthAt2g16600
At3g63400
At4g38740
At2g21130
At3g56070
At4g32420
At2g29960
At1g74070
At4g34870
At4g34960
At3g22920
At3g55920
At5g58710
At5g35100
GO:0005515 protein binding F
IPI
HsaPPIA
GO:0016018 cyclosporin A binding F
IMP
SceS000002562
ISS
AthAt3g56070
GO:0046790 virion binding F
NAS
HsaPPIA
GO:0051082 unfolded protein binding F
TAS
HsaPPIA
GO:0006457 protein folding P
IDA
SceS000004543
ISS
AthAt3g63400
At2g16600
At2g29960
At2g21130
At4g32420
At3g56070
At1g74070
At3g55920
At4g38740
At3g22920
At4g34870
At4g34960
At5g58710
At5g35100
CelWBGene00000879
TAS
HsaPPIA
GO:0006915 apoptosis P
IMP
SceS000004543
GO:0007165 signal transduction P
ISS
AthAt3g56070
At4g34870
At4g38740
At2g16600
GO:0008380 RNA splicing P
NAS
AthAt3g63400
GO:0009792 embryo development ending in birth or egg
hatching		 P
IMP
CelWBGene00000883
GO:0016575 histone deacetylation P
IDA
SceS000002562
GO:0019047 provirus integration P
EXP
HsaPPIA
GO:0019059 initiation of viral infection P
EXP
HsaPPIA
GO:0030437 ascospore formation P
IMP
SceS000002562
GO:0044267 cellular protein metabolic process P
IMP
SceS000002562
GO:0045069 regulation of viral genome replication P
IMP
HsaPPIA
TAS
HsaPPIA
GO:0045835 negative regulation of meiosis P
IPI
SceS000002562
GO:0046686 response to cadmium ion P
IEP
AthAt4g38740
At3g56070
GO:0048364 root development P
IMP
AthAt5g58710
GO:0055114 oxidation reduction P
RCA
SceS000004543

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HomoloGene results:

HomoloGene cluster Phylogenetic pattern
115610

Species Gene ID NCBI link UniProt link
Homo sapiens (Hsa) PPIA GI:10863927 Q71V99
Pan troglodytes (Ptr) PPIA GI:114613194
Canis familiaris (Cfa) PPIA GI:73962252
Mus musculus (Mmu) Gm9234 GI:149257773
Caenorhabditis elegans (Cel) cyn-1
(CE22213;
WBGene00000877)		 GI:17565860 P52009
Saccharomyces cerevisiae (Sce) CPR3
(S000004543)		 GI:6323562 P25719
Kluyveromyces lactis (Kla) KLLA0B04565g GI:50303589
Eremothecium gossypii (Ego) AGOS_AER156C GI:45190760
Arabidopsis thaliana (Ath) ROC2 GI:15228814
Oryza sativa (Osa) Os09g0571400 GI:115480799


GO terms for Homologene results:

GO ID GO term GO aspect Evidence codes and associations
GO:0005576 extracellular region C
EXP
HsaPPIA
GO:0005634 nucleus C
IDA
HsaPPIA
GO:0005739 mitochondrion C
IDA
SceS000004543
GO:0005829 cytosol C
EXP
HsaPPIA
IDA
HsaPPIA
ISS
AthROC2
GO:0003755 peptidyl-prolyl cis-trans isomerase
activity		 F
IDA
SceS000004543
ISS
AthROC2
GO:0005515 protein binding F
IPI
HsaPPIA
GO:0016018 cyclosporin A binding F
ISS
AthROC2
GO:0046790 virion binding F
NAS
HsaPPIA
GO:0051082 unfolded protein binding F
TAS
HsaPPIA
GO:0006457 protein folding P
IDA
SceS000004543
ISS
AthROC2
TAS
HsaPPIA
GO:0006915 apoptosis P
IMP
SceS000004543
GO:0007165 signal transduction P
ISS
AthROC2
GO:0019047 provirus integration P
EXP
HsaPPIA
GO:0019059 initiation of viral infection P
EXP
HsaPPIA
GO:0045069 regulation of viral genome replication P
IMP
HsaPPIA
TAS
HsaPPIA
GO:0046686 response to cadmium ion P
IEP
AthROC2
GO:0055114 oxidation reduction P
RCA
SceS000004543

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OrthoMCL results:

Selected databases only

OrthoMCL cluster Phylogenetic pattern
OG1_111

Species OrthoMCL
sequence		 Model organism
protein page		 UniProt link
Anopheles gambiae (Aga) aga2539 ENSANGP00000011257
Anopheles gambiae (Aga) aga15079 ENSANGP00000020778
Ashbya gossypii (Ago) ago131 AAL056C
Ashbya gossypii (Ago) ago2659 AER156C
Ashbya gossypii (Ago) ago4135 AGL177C
Arabidopsis thaliana (Ath) ath8499 At2g16600.1
Arabidopsis thaliana (Ath) ath9000 At2g21130.1
Arabidopsis thaliana (Ath) ath9973 At2g29960.1
Arabidopsis thaliana (Ath) ath16981 At3g55920.1
Arabidopsis thaliana (Ath) ath16996 At3g56070.1
Arabidopsis thaliana (Ath) ath17650 At3g62030.1
Arabidopsis thaliana (Ath) ath21633 At4g34870.1
Arabidopsis thaliana (Ath) ath22068 At4g38740.1
Arabidopsis thaliana (Ath) ath23499 At5g13120.1
Arabidopsis thaliana (Ath) ath27927 At5g58710.1
Caenorhabditis elegans (Cel) cel7757 F31C3.1
(CE17730;
WBGene00000881)
Caenorhabditis elegans (Cel) cel8947 F42G9.2
(CE01301;
WBGene00000882)
Caenorhabditis elegans (Cel) cel19332 Y49A3A.5
(CE22213;
WBGene00000877)
Caenorhabditis elegans (Cel) cel20823 Y75B12B.2
(CE20371;
WBGene00000883)
Caenorhabditis elegans (Cel) cel20826 Y75B12B.5
(CE20374;
WBGene00000879)
Caenorhabditis elegans (Cel) cel21966 ZK520.5
(CE16730;
WBGene00000878)
Candida glabrata (Cgl) cgl992 CAGL0E01177g
Candida glabrata (Cgl) cgl2132 CAGL0H01529g
Candida glabrata (Cgl) cgl2249 CAGL0H04301g
Cryptococcus neoformans (Cne) cne4198 177.m02956
Cryptococcus neoformans (Cne) cne4689 186.m03544
Cryptococcus neoformans (Cne) cne4694 186.m03549
Dictyostelium discoideum (Ddi) ddi11363 DDB0191497
Dictyostelium discoideum (Ddi) ddi12234 DDB0216173
Debaryomyces hansenii (Dha) dha1016 DEHA0B07557g
Debaryomyces hansenii (Dha) dha4059 DEHA0E18480g
Debaryomyces hansenii (Dha) dha6198 DEHA0G11220g
Drosophila melanogaster (Dme) dme6568 CG2852-PA
(FBgn0034753)
Drosophila melanogaster (Dme) dme9468 CG7768-PA
(FBgn0036415)
Drosophila melanogaster (Dme) dme9467 CG7768-PB
(FBgn0036415)
Drosophila melanogaster (Dme) dme18147 CG9916-PA
(FBgn0004432)
Danio rerio (Dre) dre23010 ENSDARP00000003641
(ppia)		 Q499A7
Danio rerio (Dre) dre16514 ENSDARP00000027189
Encephalitozoon cuniculi (Ecu) ecu204 19173373
Takifugu rubripes (Fru) fru6968 SINFRUP00000138892
Takifugu rubripes (Fru) fru26731 SINFRUP00000147214
Takifugu rubripes (Fru) fru3812 SINFRUP00000153901
Takifugu rubripes (Fru) fru4250 SINFRUP00000154998
Takifugu rubripes (Fru) fru25197 SINFRUP00000165776
Takifugu rubripes (Fru) fru25196 SINFRUP00000169089
Takifugu rubripes (Fru) fru25198 SINFRUP00000175075
Takifugu rubripes (Fru) fru25195 SINFRUP00000176123
Gallus gallus (Gga) gga3633 ENSGALP00000003455
(PPIB)		 P24367
Gallus gallus (Gga) gga20417 ENSGALP00000007666
(RCJMB04_1o7)		 Q5ZMJ0
Homo sapiens (Hsa) hsa4180 ENSP00000225174
(PPIF)		 P30405
Homo sapiens (Hsa) hsa10761 ENSP00000300026
(PPIB)		 P23284
Homo sapiens (Hsa) hsa28557 ENSP00000348240
Homo sapiens (Hsa) hsa20750 ENSP00000351238
Kluyveromyces lactis (Kla) kla734 KLLA0B04565g
Kluyveromyces lactis (Kla) kla1653 KLLA0C10208g
Kluyveromyces lactis (Kla) kla2795 KLLA0D16676g
Mus musculus (Mmu) mmu3242 ENSMUSP00000003464
Mus musculus (Mmu) mmu7783 ENSMUSP00000022419
(MGI:2145814)		 Q99KR7
Mus musculus (Mmu) mmu27839 ENSMUSP00000034947
(MGI:97750)		 P24369
Mus musculus (Mmu) mmu28106 ENSMUSP00000071686
(MGI:97749)		 Q9CZK9
Neurospora crassa (Ncr) ncr704 NCU00726.2
Neurospora crassa (Ncr) ncr1163 NCU01200.2
Oryza sativa (Osa) osa2473 1946.m00183
Oryza sativa (Osa) osa2525 1946.m00249
Oryza sativa (Osa) osa2795 1957.m00198
Oryza sativa (Osa) osa6858 2486.m00112
Oryza sativa (Osa) osa11497 2774.m00162
Oryza sativa (Osa) osa10353 2775.m00167
Oryza sativa (Osa) osa13609 2868.m00181
Oryza sativa (Osa) osa14650 2972.m00156
Oryza sativa (Osa) osa15698 2997.m00178
Oryza sativa (Osa) osa55490 6374.m00109
Oryza sativa (Osa) osa65624 6765.m00147
Oryza sativa (Osa) osa65666 6765.m00168
Plasmodium falciparum (Pfa) pfa1104 PF11_0164
Plasmodium falciparum (Pfa) pfa2870 PFC0975c
Rattus norvegicus (Rno) rno10714 ENSRNOP00000009179
(RGD:3372)		 P10111
Rattus norvegicus (Rno) rno10213 ENSRNOP00000009407
(RGD:3372)		 P10111
Rattus norvegicus (Rno) rno11909 ENSRNOP00000014382
(RGD:628670)		 P29117
Rattus norvegicus (Rno) rno28830 ENSRNOP00000022828
(RGD:620312)		 P24368
Saccharomyces cerevisiae (Sce) sce1193 YDR155C
(S000002562)
Saccharomyces cerevisiae (Sce) sce1357 YDR304C
(S000002712)
Saccharomyces cerevisiae (Sce) sce2814 YHR057C
(S000001099)
Saccharomyces cerevisiae (Sce) sce4682 YML078W
(S000004543)
Schizosaccharomyces pombe (Spo) spo3290 SPBC28F2.03 P18253
Schizosaccharomyces pombe (Spo) spo2015 SPBP8B7.25 O94273
Yarrowia lipolytica (Yli) yli2131 YALI0C09988g
Yarrowia lipolytica (Yli) yli2140 YALI0C10230g
Yarrowia lipolytica (Yli) yli4818 YALI0E23155g


GO terms for OrthoMCL results:

GO ID GO term GO aspect Evidence codes and associations
GO:0000118 histone deacetylase complex C
IPI
SceS000002562
GO:0005575 cellular_component C
ND
PfaPF11_0164
SceS000001099
GO:0005623 cell C
IDA
CelWBGene00000879
GO:0005624 membrane fraction C
IDA
AthAt2g29960
GO:0005634 nucleus C
IDA
SceS000002562
SpoSPBC28F2.03
GO:0005737 cytoplasm C
IDA
SceS000002712
NAS
DmeFBgn0004432
GO:0005739 mitochondrion C
IDA
MmuMGI:2145814
SceS000004543
S000002562
ISO
MmuMGI:2145814
GO:0005743 mitochondrial inner membrane C
ISO
MmuMGI:2145814
GO:0005759 mitochondrial matrix C
ISO
MmuMGI:2145814
GO:0005771 multivesicular body C
IDA
AthAt2g29960
GO:0005783 endoplasmic reticulum C
IDA
AthAt2g29960
SceS000002712
SpoSPBP8B7.25
GO:0005788 endoplasmic reticulum lumen C
ISS
SpoSPBP8B7.25
GO:0005794 Golgi apparatus C
IDA
SpoSPBP8B7.25
GO:0005795 Golgi stack C
IDA
AthAt2g29960
GO:0005811 lipid particle C
IDA
DmeFBgn0034753
GO:0005829 cytosol C
IDA
AthAt2g29960
SpoSPBC28F2.03
ISS
AthAt3g56070
At2g16600
At4g34870
At4g38740
DmeFBgn0004432
TAS
PfaPFC0975c
GO:0005875 microtubule associated complex C
IDA
DmeFBgn0034753
FBgn0004432
GO:0005886 plasma membrane C
IDA
AthAt2g21130
At2g16600
At4g34870
At3g55920
At4g38740
GO:0008024 positive transcription elongation factor complex
b		 C
NAS
DmeFBgn0004432
GO:0009507 chloroplast C
IDA
AthAt3g62030
At4g34870
At5g13120
At2g16600
At5g58710
GO:0009533 chloroplast stromal thylakoid C
IDA
AthAt5g13120
GO:0009535 chloroplast thylakoid membrane C
IDA
AthAt3g62030
At5g13120
GO:0009543 chloroplast thylakoid lumen C
IDA
AthAt5g13120
GO:0009570 chloroplast stroma C
IDA
AthAt3g62030
GO:0009579 thylakoid C
IDA
AthAt3g62030
At5g13120
GO:0009941 chloroplast envelope C
IDA
AthAt3g62030
GO:0019908 nuclear cyclin-dependent protein kinase holoenzyme
complex		 C
NAS
DmeFBgn0004432
GO:0022626 cytosolic ribosome C
IDA
AthAt3g62030
GO:0031977 thylakoid lumen C
IDA
AthAt3g62030
At5g13120
GO:0034967 Set3 complex C
IDA
SceS000002562
GO:0048046 apoplast C
IDA
AthAt4g34870
At3g62030
At4g38740
GO:0003755 peptidyl-prolyl cis-trans isomerase
activity		 F
IDA
AthAt3g62030
At2g29960
CelWBGene00000879
PfaPFC0975c
SceS000001099
S000004543
S000002562
IMP
AthAt5g13120
ISO
MmuMGI:2145814
ISS
AthAt2g16600
At4g38740
At2g21130
At3g56070
At5g13120
At3g62030
At2g29960
At4g34870
At3g55920
At5g58710
DmeFBgn0004432
FBgn0036415
FBgn0034753
SceS000002712
NAS
DmeFBgn0004432
TAS
PfaPF11_0164
GO:0005515 protein binding F
IPI
MmuMGI:97749
GO:0016018 cyclosporin A binding F
IDA
PfaPFC0975c
IMP
SceS000002562
ISO
MmuMGI:2145814
ISS
AthAt3g56070
TAS
PfaPF11_0164
GO:0016538 cyclin-dependent protein kinase regulator
activity		 F
NAS
DmeFBgn0004432
GO:0042277 peptide binding F
ISO
MmuMGI:2145814
GO:0006457 protein folding P
IDA
SceS000004543
ISS
AthAt2g16600
At2g29960
At2g21130
At3g56070
At3g62030
At5g13120
At3g55920
At4g38740
At4g34870
At5g58710
CelWBGene00000879
NAS
DmeFBgn0004432
GO:0006915 apoptosis P
IMP
SceS000004543
GO:0006979 response to oxidative stress P
IMP
AthAt3g62030
GO:0007165 signal transduction P
ISS
AthAt3g56070
At4g34870
At4g38740
At3g62030
At2g16600
GO:0008150 biological_process P
ND
SceS000002712
S000001099
GO:0009642 response to light intensity P
IMP
AthAt3g62030
GO:0009651 response to salt stress P
IMP
AthAt3g62030
GO:0009737 response to abscisic acid stimulus P
IEP
AthAt3g62030
GO:0009792 embryo development ending in birth or egg
hatching		 P
IMP
CelWBGene00000883
GO:0010275 NAD(P)H dehydrogenase complex assembly P
IMP
AthAt5g13120
GO:0010555 response to mannitol stimulus P
IMP
AthAt3g62030
GO:0016575 histone deacetylation P
IDA
SceS000002562
GO:0019344 cysteine biosynthetic process P
IMP
AthAt3g62030
GO:0030182 neuron differentiation P
IMP
MmuMGI:97749
GO:0030437 ascospore formation P
IMP
SceS000002562
GO:0035071 salivary gland cell autophagic cell
death		 P
IEP
DmeFBgn0004432
GO:0042742 defense response to bacterium P
IEP
AthAt3g62030
GO:0042981 regulation of apoptosis P
ISO
MmuMGI:2145814
GO:0044267 cellular protein metabolic process P
IMP
SceS000002562
GO:0045835 negative regulation of meiosis P
IPI
SceS000002562
GO:0046686 response to cadmium ion P
IEP
AthAt4g38740
At3g56070
GO:0046902 regulation of mitochondrial membrane
permeability		 P
ISO
MmuMGI:2145814
GO:0048102 autophagic cell death P
IEP
DmeFBgn0004432
GO:0048364 root development P
IMP
AthAt5g58710
GO:0055114 oxidation reduction P
RCA
SceS000004543

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s.khadayate@ucl.ac.uk