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Search term: YML103C

Gene summary:

Species Saccharomyces cerevisiae (Sce)
Primary name NUP188
SGD link S000004571
Alternative ID YML103C
Description Subunit of the nuclear pore complex (NPC), involved in the structural organization of the complex and of the nuclear envelope, also involved in nuclear envelope permeability, interacts with Pom152p and Nic96p
Synonyms YML103C
Datasets
KOGs
Inparanoid
HomoloGene
OrthoMCL
Curated

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HomoloGene results:

HomoloGene cluster Phylogenetic pattern
39834

Species Gene ID NCBI link UniProt link
Schizosaccharomyces pombe (Spo) nup184
(SPAP27G11.10c)		 GI:19114326 Q9P7M8
Saccharomyces cerevisiae (Sce) NUP188
(S000004571)		 GI:6323533
Kluyveromyces lactis (Kla) KLLA0E11033g GI:50308885
Eremothecium gossypii (Ego) AGOS_AER284W GI:45190887
Magnaporthe grisea (Mgr) MGG_06426 GI:145608716
Neurospora crassa (Ncr) NCU00199.1 GI:32403344


GO terms for Homologene results:

GO ID GO term GO aspect Evidence codes and associations
GO:0005643 nuclear pore C
IDA
SceS000004571
ISS
SpoSPAP27G11.10c
GO:0003674 molecular_function F
ND
SpoSPAP27G11.10c
GO:0005198 structural molecule activity F
TAS
SceS000004571
GO:0006406 mRNA export from nucleus P
IGI
SpoSPAP27G11.10c
TAS
SceS000004571
GO:0006407 rRNA export from nucleus P
TAS
SceS000004571
GO:0006408 snRNA export from nucleus P
TAS
SceS000004571
GO:0006409 tRNA export from nucleus P
TAS
SceS000004571
GO:0006607 NLS-bearing substrate import into
nucleus		 P
ISS
SpoSPAP27G11.10c
TAS
SceS000004571
GO:0006608 snRNP protein import into nucleus P
TAS
SceS000004571
GO:0006609 mRNA-binding (hnRNP) protein import into
nucleus		 P
TAS
SceS000004571
GO:0006610 ribosomal protein import into nucleus P
TAS
SceS000004571
GO:0006611 protein export from nucleus P
ISS
SpoSPAP27G11.10c
TAS
SceS000004571
GO:0006999 nuclear pore organization P
IMP
SceS000004571
GO:0045184 establishment of protein localization P
RCA
SceS000004571

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OrthoMCL results:

Selected databases only

OrthoMCL cluster Phylogenetic pattern
OG1_15221

Species OrthoMCL
sequence		 Model organism
protein page		 UniProt link
Ashbya gossypii (Ago) ago2786 AER284W
Candida glabrata (Cgl) cgl3275 CAGL0J06534g
Debaryomyces hansenii (Dha) dha4926 DEHA0F12210g
Kluyveromyces lactis (Kla) kla3447 KLLA0E11033g
Neurospora crassa (Ncr) ncr192 NCU00199.2
Saccharomyces cerevisiae (Sce) sce4712 YML103C
(S000004571)
Schizosaccharomyces pombe (Spo) spo1460 SPAP27G11.10c Q9P7M8
Yarrowia lipolytica (Yli) yli5913 YALI0F13519g


GO terms for OrthoMCL results:

GO ID GO term GO aspect Evidence codes and associations
GO:0005643 nuclear pore C
IDA
SceS000004571
ISS
SpoSPAP27G11.10c
GO:0003674 molecular_function F
ND
SpoSPAP27G11.10c
GO:0005198 structural molecule activity F
TAS
SceS000004571
GO:0006406 mRNA export from nucleus P
IGI
SpoSPAP27G11.10c
TAS
SceS000004571
GO:0006407 rRNA export from nucleus P
TAS
SceS000004571
GO:0006408 snRNA export from nucleus P
TAS
SceS000004571
GO:0006409 tRNA export from nucleus P
TAS
SceS000004571
GO:0006607 NLS-bearing substrate import into
nucleus		 P
ISS
SpoSPAP27G11.10c
TAS
SceS000004571
GO:0006608 snRNP protein import into nucleus P
TAS
SceS000004571
GO:0006609 mRNA-binding (hnRNP) protein import into
nucleus		 P
TAS
SceS000004571
GO:0006610 ribosomal protein import into nucleus P
TAS
SceS000004571
GO:0006611 protein export from nucleus P
ISS
SpoSPAP27G11.10c
TAS
SceS000004571
GO:0006999 nuclear pore organization P
IMP
SceS000004571
GO:0045184 establishment of protein localization P
RCA
SceS000004571

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Curated yeast ortholog results:

S. pombe
systematic ID		 S. cerevisiae
systematic ID
SPAP27G11.10c
(Q9P7M8)		 YML103C
(S000004571)


GO terms for curated homolog results:

GO ID GO term GO aspect Evidence codes and associations
GO:0005643 nuclear pore C
IDA
SceS000004571
ISS
SpoSPAP27G11.10c
GO:0003674 molecular_function F
ND
SpoSPAP27G11.10c
GO:0005198 structural molecule activity F
TAS
SceS000004571
GO:0006406 mRNA export from nucleus P
IGI
SpoSPAP27G11.10c
TAS
SceS000004571
GO:0006407 rRNA export from nucleus P
TAS
SceS000004571
GO:0006408 snRNA export from nucleus P
TAS
SceS000004571
GO:0006409 tRNA export from nucleus P
TAS
SceS000004571
GO:0006607 NLS-bearing substrate import into
nucleus		 P
ISS
SpoSPAP27G11.10c
TAS
SceS000004571
GO:0006608 snRNP protein import into nucleus P
TAS
SceS000004571
GO:0006609 mRNA-binding (hnRNP) protein import into
nucleus		 P
TAS
SceS000004571
GO:0006610 ribosomal protein import into nucleus P
TAS
SceS000004571
GO:0006611 protein export from nucleus P
ISS
SpoSPAP27G11.10c
TAS
SceS000004571
GO:0006999 nuclear pore organization P
IMP
SceS000004571
GO:0045184 establishment of protein localization P
RCA
SceS000004571

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