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Search term: YMR023C

Gene summary:

Species Saccharomyces cerevisiae (Sce)
Primary name MSS1
SGD link S000004625
Alternative ID YMR023C
Description Mitochondrial protein, forms a heterodimer complex with Mto1p that performs the 5-carboxymethylaminomethyl modification of the wobble uridine base in mitochondrial tRNAs; similar to human GTPBP3
Synonyms YMR023C
Datasets
KOGs
Inparanoid
HomoloGene
OrthoMCL
Curated

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GO info in one table:

KOG results:

KOG name Phylogenetic pattern
(and link to KOGs with this pattern)
KOG1191 ACDHYP-

KOGs classification KOGs description
INFORMATION STORAGE AND PROCESSING Mitochondrial GTPase

Species KOG link NCBI link UniProt link
Arabidopsis thaliana (Ath) At1g78010 GI:15218197
Arabidopsis thaliana (Ath) At3g12080 GI:15229950
Arabidopsis thaliana (Ath) At5g39960 GI:15242526
Caenorhabditis elegans (Cel) CE19834
(WBGene00009557)		 GI:17507259 Q9XTZ1
Drosophila melanogaster (Dme) 7301155 GI:7301155
Homo sapiens (Hsa) Hs14249126 GI:14249126
Saccharomyces cerevisiae (Sce) YMR023c
(S000004625)		 GI:6323665 P32559
Schizosaccharomyces pombe (Spo) SPAC222.05c GI:19114056 Q9UTE7
Arabidopsis thaliana (Ath) At1g78010 GI:15218197
Arabidopsis thaliana (Ath) At3g12080 GI:15229950
Arabidopsis thaliana (Ath) At5g39960 GI:15242526
Caenorhabditis elegans (Cel) CE19834
(WBGene00009557)		 GI:17507259 Q9XTZ1
Drosophila melanogaster (Dme) 7301155 GI:7301155
Homo sapiens (Hsa) Hs14249126 GI:14249126
Saccharomyces cerevisiae (Sce) YMR023c
(S000004625)		 GI:6323665 P32559
Schizosaccharomyces pombe (Spo) SPAC222.05c GI:19114056 Q9UTE7


GO terms for KOG results:

GO ID GO term GO aspect Evidence codes and associations
GO:0005737 cytoplasm C
IDA
SpoSPAC222.05c
GO:0005739 mitochondrion C
IDA
SceS000004625
GO:0005743 mitochondrial inner membrane C
IDA
SceS000004625
ISS
SpoSPAC222.05c
GO:0009507 chloroplast C
IDA
AthAt3g12080
GO:0003924 GTPase activity F
ISS
AthAt1g78010
SpoSPAC222.05c
RCA
SceS000004625
GO:0005525 GTP binding F
ISS
AthAt5g39960
At3g12080
SceS000004625
SpoSPAC222.05c
GO:0006184 GTP catabolic process P
ISS
SpoSPAC222.05c
GO:0006400 tRNA modification P
ISS
AthAt1g78010
SpoSPAC222.05c
GO:0006412 translation P
ISS
SpoSPAC222.05c
GO:0009793 embryo development ending in seed
dormancy		 P
NAS
AthAt3g12080
GO:0032543 mitochondrial translation P
NAS
SpoSPAC222.05c
GO:0070899 mitochondrial tRNA wobble uridine
modification		 P
IMP
SceS000004625

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HomoloGene results:

HomoloGene cluster Phylogenetic pattern
6600

Species Gene ID NCBI link UniProt link
Homo sapiens (Hsa) GTPBP3 GI:193082988
Canis familiaris (Cfa) GTPBP3 GI:73986022
Mus musculus (Mmu) Gtpbp3
(MGI:1917609)		 GI:33414589 B2RRS4
Rattus norvegicus (Rno) Gtpbp3
(RGD:1305367)		 GI:58865408
Drosophila melanogaster (Dme) CG18528
(FBgn0039189)		 GI:45550813
Anopheles gambiae (Aga) AgaP_AGAP002133 GI:158301166
Caenorhabditis elegans (Cel) F39B2.7
(CE19834;
WBGene00009557)		 GI:17507259 Q9XTZ1
Schizosaccharomyces pombe (Spo) mss1
(SPAC222.05c)		 GI:19114056 Q9UTE7
Saccharomyces cerevisiae (Sce) MSS1
(S000004625)		 GI:6323665 P32559
Kluyveromyces lactis (Kla) KLLA0E07634g GI:50308583
Magnaporthe grisea (Mgr) MGG_04070 GI:145607203
Neurospora crassa (Ncr) NCU04149.1 GI:32405752
Arabidopsis thaliana (Ath) AT1G78010 GI:42563304
Oryza sativa (Osa) Os08g0407000 GI:115476356


GO terms for Homologene results:

GO ID GO term GO aspect Evidence codes and associations
GO:0005737 cytoplasm C
IDA
SpoSPAC222.05c
GO:0005739 mitochondrion C
IDA
MmuMGI:1917609
SceS000004625
GO:0005743 mitochondrial inner membrane C
IDA
SceS000004625
ISS
SpoSPAC222.05c
GO:0003924 GTPase activity F
ISS
AthAt1g78010
SpoSPAC222.05c
RCA
SceS000004625
GO:0005525 GTP binding F
ISS
SceS000004625
SpoSPAC222.05c
GO:0006184 GTP catabolic process P
ISS
SpoSPAC222.05c
GO:0006400 tRNA modification P
ISS
AthAt1g78010
SpoSPAC222.05c
GO:0006412 translation P
ISS
SpoSPAC222.05c
GO:0032543 mitochondrial translation P
NAS
SpoSPAC222.05c
GO:0070899 mitochondrial tRNA wobble uridine
modification		 P
IMP
SceS000004625

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OrthoMCL results:

Selected databases only

OrthoMCL cluster Phylogenetic pattern
OG1_1241

Species OrthoMCL
sequence		 Model organism
protein page		 UniProt link
Anopheles gambiae (Aga) aga4255 ENSANGP00000007751
Ashbya gossypii (Ago) ago654 ABR063C
Arabidopsis thaliana (Ath) ath7147 At1g78010.1
Caenorhabditis elegans (Cel) cel8564 F39B2.7
(CE19834;
WBGene00009557)
Candida glabrata (Cgl) cgl4986 CAGL0M07546g
Dictyostelium discoideum (Ddi) ddi2593 DDB0190890
Debaryomyces hansenii (Dha) dha3194 DEHA0D20053g
Drosophila melanogaster (Dme) dme14209 CG18528-PA
(FBgn0039189)
Danio rerio (Dre) dre15991 ENSDARP00000004190
Danio rerio (Dre) dre15990 ENSDARP00000015341
Escherichia coli (Eco) eco3585 16131574
Takifugu rubripes (Fru) fru21661 SINFRUP00000158019
Takifugu rubripes (Fru) fru21659 SINFRUP00000158020
Takifugu rubripes (Fru) fru21660 SINFRUP00000158021
Homo sapiens (Hsa) hsa15895 ENSP00000313818
(GTPBP3)		 B7Z4V8
Homo sapiens (Hsa) hsa15894 ENSP00000351644
(GTPBP3)		 A6NFH1
Kluyveromyces lactis (Kla) kla3293 KLLA0E07634g
Mus musculus (Mmu) mmu26160 ENSMUSP00000007754
(MGI:1917609)		 Q923K4-1
Neurospora crassa (Ncr) ncr4025 NCU04149.2
Oryza sativa (Osa) osa79489 7445.m00144
Rattus norvegicus (Rno) rno12179 ENSRNOP00000000070
Saccharomyces cerevisiae (Sce) sce4771 YMR023C
(S000004625)
Schizosaccharomyces pombe (Spo) spo1656 SPAC222.05c Q9UTE7
Yarrowia lipolytica (Yli) yli1520 YALI0B18612g


GO terms for OrthoMCL results:

GO ID GO term GO aspect Evidence codes and associations
GO:0005737 cytoplasm C
IDA
SpoSPAC222.05c
GO:0005739 mitochondrion C
IDA
MmuMGI:1917609
SceS000004625
GO:0005743 mitochondrial inner membrane C
IDA
SceS000004625
ISS
SpoSPAC222.05c
GO:0003924 GTPase activity F
ISS
AthAt1g78010
SpoSPAC222.05c
RCA
SceS000004625
GO:0005525 GTP binding F
ISS
SceS000004625
SpoSPAC222.05c
GO:0006184 GTP catabolic process P
ISS
SpoSPAC222.05c
GO:0006400 tRNA modification P
ISS
AthAt1g78010
SpoSPAC222.05c
GO:0006412 translation P
ISS
SpoSPAC222.05c
GO:0032543 mitochondrial translation P
NAS
SpoSPAC222.05c
GO:0070899 mitochondrial tRNA wobble uridine
modification		 P
IMP
SceS000004625

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Curated yeast ortholog results:

S. pombe
systematic ID		 S. cerevisiae
systematic ID
SPAC222.05c
(Q9UTE7)		 YMR023C
(S000004625)


GO terms for curated homolog results:

GO ID GO term GO aspect Evidence codes and associations
GO:0005737 cytoplasm C
IDA
SpoSPAC222.05c
GO:0005739 mitochondrion C
IDA
SceS000004625
GO:0005743 mitochondrial inner membrane C
IDA
SceS000004625
ISS
SpoSPAC222.05c
GO:0003924 GTPase activity F
ISS
SpoSPAC222.05c
RCA
SceS000004625
GO:0005525 GTP binding F
ISS
SceS000004625
SpoSPAC222.05c
GO:0006184 GTP catabolic process P
ISS
SpoSPAC222.05c
GO:0006400 tRNA modification P
ISS
SpoSPAC222.05c
GO:0006412 translation P
ISS
SpoSPAC222.05c
GO:0032543 mitochondrial translation P
NAS
SpoSPAC222.05c
GO:0070899 mitochondrial tRNA wobble uridine
modification		 P
IMP
SceS000004625

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