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Search term: YMR024W

Gene summary:

Species Saccharomyces cerevisiae (Sce)
Primary name MRPL3
SGD link S000004626
Alternative ID YMR024W
Description Mitochondrial ribosomal protein of the large subunit
Synonyms YMR024W
Datasets
KOGs
Inparanoid
HomoloGene
OrthoMCL
Curated

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KOG results:

KOG name Phylogenetic pattern
(and link to KOGs with this pattern)
KOG3769 -CDHYP-

KOGs classification KOGs description
INFORMATION STORAGE AND PROCESSING Ribonuclease III domain proteins

Species KOG link NCBI link UniProt link
Caenorhabditis elegans (Cel) CE20652 GI:17552934
Drosophila melanogaster (Dme) 7296746 GI:7296746 Q9VNC1
Homo sapiens (Hsa) Hs12597661
(MRPL44)		 GI:12597661 Q9H9J2
Saccharomyces cerevisiae (Sce) YMR024w
(S000004626)		 GI:6323666 P36516
Schizosaccharomyces pombe (Spo) SPBC3B9.14c GI:19113464 O43042


GO terms for KOG results:

GO ID GO term GO aspect Evidence codes and associations
GO:0005575 cellular_component C
ND
HsaMRPL44
GO:0005737 cytoplasm C
IDA
SpoSPBC3B9.14c
GO:0005739 mitochondrion C
IDA
SceS000004626
GO:0005762 mitochondrial large ribosomal subunit C
IPI
SceS000004626
ISS
SpoSPBC3B9.14c
GO:0003674 molecular_function F
ND
HsaMRPL44
GO:0003725 double-stranded RNA binding F
ISS
SpoSPBC3B9.14c
GO:0003735 structural constituent of ribosome F
IPI
SceS000004626
ISS
SpoSPBC3B9.14c
GO:0004525 ribonuclease III activity F
ISS
SpoSPBC3B9.14c
GO:0005515 protein binding F
IPI
HsaMRPL44
GO:0006396 RNA processing P
ISS
SpoSPBC3B9.14c
GO:0006412 translation P
ISS
SpoSPBC3B9.14c
GO:0008150 biological_process P
ND
HsaMRPL44
GO:0032543 mitochondrial translation P
IC
SceS000004626
NAS
SpoSPBC3B9.14c

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HomoloGene results:

HomoloGene cluster Phylogenetic pattern
30189

Species Gene ID NCBI link UniProt link
Saccharomyces cerevisiae (Sce) MRPL3
(S000004626)		 GI:6323666 P36516
Kluyveromyces lactis (Kla) KLLA0E07612g GI:50308581
Eremothecium gossypii (Ego) AGOS_ABR065W GI:45185294
Magnaporthe grisea (Mgr) MGG_01524 GI:39951763
Neurospora crassa (Ncr) NCU08299.1 GI:32417054


GO terms for Homologene results:

GO ID GO term GO aspect Evidence codes and associations
GO:0005739 mitochondrion C
IDA
SceS000004626
GO:0005762 mitochondrial large ribosomal subunit C
IPI
SceS000004626
GO:0003735 structural constituent of ribosome F
IPI
SceS000004626
GO:0032543 mitochondrial translation P
IC
SceS000004626

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OrthoMCL results:

Selected databases only

OrthoMCL cluster Phylogenetic pattern
OG1_13144

Species OrthoMCL
sequence		 Model organism
protein page		 UniProt link
Ashbya gossypii (Ago) ago656 ABR065W
Candida glabrata (Cgl) cgl4985 CAGL0M07513g
Cryptococcus neoformans (Cne) cne5571 179.m00431
Debaryomyces hansenii (Dha) dha5624 DEHA0F27687g
Kluyveromyces lactis (Kla) kla3292 KLLA0E07612g
Neurospora crassa (Ncr) ncr8088 NCU08299.2
Saccharomyces cerevisiae (Sce) sce4772 YMR024W
(S000004626)
Schizosaccharomyces pombe (Spo) spo4417 SPBC3B9.14c O43042
Yarrowia lipolytica (Yli) yli3460 YALI0D18150g


GO terms for OrthoMCL results:

GO ID GO term GO aspect Evidence codes and associations
GO:0005737 cytoplasm C
IDA
SpoSPBC3B9.14c
GO:0005739 mitochondrion C
IDA
SceS000004626
GO:0005762 mitochondrial large ribosomal subunit C
IPI
SceS000004626
ISS
SpoSPBC3B9.14c
GO:0003725 double-stranded RNA binding F
ISS
SpoSPBC3B9.14c
GO:0003735 structural constituent of ribosome F
IPI
SceS000004626
ISS
SpoSPBC3B9.14c
GO:0004525 ribonuclease III activity F
ISS
SpoSPBC3B9.14c
GO:0006396 RNA processing P
ISS
SpoSPBC3B9.14c
GO:0006412 translation P
ISS
SpoSPBC3B9.14c
GO:0032543 mitochondrial translation P
IC
SceS000004626
NAS
SpoSPBC3B9.14c

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Curated yeast ortholog results:

S. pombe
systematic ID		 S. cerevisiae
systematic ID
SPBC3B9.14c
(O43042)		 YMR024W
(S000004626)


GO terms for curated homolog results:

GO ID GO term GO aspect Evidence codes and associations
GO:0005737 cytoplasm C
IDA
SpoSPBC3B9.14c
GO:0005739 mitochondrion C
IDA
SceS000004626
GO:0005762 mitochondrial large ribosomal subunit C
IPI
SceS000004626
ISS
SpoSPBC3B9.14c
GO:0003725 double-stranded RNA binding F
ISS
SpoSPBC3B9.14c
GO:0003735 structural constituent of ribosome F
IPI
SceS000004626
ISS
SpoSPBC3B9.14c
GO:0004525 ribonuclease III activity F
ISS
SpoSPBC3B9.14c
GO:0006396 RNA processing P
ISS
SpoSPBC3B9.14c
GO:0006412 translation P
ISS
SpoSPBC3B9.14c
GO:0032543 mitochondrial translation P
IC
SceS000004626
NAS
SpoSPBC3B9.14c

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