YOGY Home | YOGY Help |
|
KOG name | Phylogenetic pattern (and link to KOGs with this pattern) |
KOG0845 | ACDHYPE![]() |
KOGs classification | KOGs description |
CELLULAR PROCESSES AND SIGNALINGCELLULAR PROCESSES AND SIGNALING | Nuclear pore complex, Nup98 component (sc Nup145/Nup100/Nup116) |
HomoloGene cluster | Phylogenetic pattern |
117889 | ![]() |
Species | Gene ID | NCBI link | UniProt link |
Schizosaccharomyces pombe (Spo) | nup189 (SPAC1486.05) | GI:19115005 | Q9UTK4 |
Saccharomyces cerevisiae (Sce) | NUP116 (S000004650) | GI:6323691 | Q02630 |
Kluyveromyces lactis (Kla) | KLLA0F26697g | GI:50312469 | |
Eremothecium gossypii (Ego) | AGOS_ABR099C | GI:45185328 | |
Magnaporthe grisea (Mgr) | MGG_04617 | GI:39945270 | |
Neurospora crassa (Ncr) | NCU04784.1 | GI:32407085 |
GO ID | GO term | GO aspect | Evidence codes and associations | ||||||||
GO:0005643 | nuclear pore | C |
| ||||||||
GO:0031080 | Nup107-160 complex | C |
| ||||||||
GO:0031965 | nuclear membrane | C |
| ||||||||
GO:0055126 | Nup82 complex | C |
| ||||||||
GO:0005198 | structural molecule activity | F |
| ||||||||
GO:0005515 | protein binding | F |
| ||||||||
GO:0008233 | peptidase activity | F |
| ||||||||
GO:0006388 | tRNA splicing, via endonucleolytic cleavage and ligation | P |
| ||||||||
GO:0006406 | mRNA export from nucleus | P |
| ||||||||
GO:0006407 | rRNA export from nucleus | P |
| ||||||||
GO:0006408 | snRNA export from nucleus | P |
| ||||||||
GO:0006409 | tRNA export from nucleus | P |
| ||||||||
GO:0006606 | protein import into nucleus | P |
| ||||||||
GO:0006607 | NLS-bearing substrate import into nucleus | P |
| ||||||||
GO:0006608 | snRNP protein import into nucleus | P |
| ||||||||
GO:0006609 | mRNA-binding (hnRNP) protein import into nucleus | P |
| ||||||||
GO:0006610 | ribosomal protein import into nucleus | P |
| ||||||||
GO:0006611 | protein export from nucleus | P |
| ||||||||
GO:0006913 | nucleocytoplasmic transport | P |
| ||||||||
GO:0006997 | nucleus organization | P |
| ||||||||
GO:0006999 | nuclear pore organization | P |
| ||||||||
GO:0045184 | establishment of protein localization | P |
| ||||||||
GO:0051301 | cell division | P |
|
OrthoMCL cluster | Phylogenetic pattern |
OG1_844 | ![]() |
Species | OrthoMCL sequence | Model organism protein page | UniProt link |
Anopheles gambiae (Aga) | aga4514 | ENSANGP00000001289 | |
Ashbya gossypii (Ago) | ago690 | ABR099C | |
Arabidopsis thaliana (Ath) | ath1076 | At1g10390.1 | |
Arabidopsis thaliana (Ath) | ath5147 | At1g59660.1 | |
Arabidopsis thaliana (Ath) | ath7457 | At1g80680.1 | |
Caenorhabditis elegans (Cel) | cel21816 | ZK328.5a (CE34447; WBGene00003796) | |
Caenorhabditis elegans (Cel) | cel21817 | ZK328.5b (CE34448) | |
Candida glabrata (Cgl) | cgl1496 | CAGL0F06171g | |
Candida glabrata (Cgl) | cgl4293 | CAGL0L04928g | |
Cryptococcus neoformans (Cne) | cne4681 | 186.m03533 | |
Dictyostelium discoideum (Ddi) | ddi10928 | DDB0183864 | |
Debaryomyces hansenii (Dha) | dha5053 | DEHA0F15037g | |
Drosophila melanogaster (Dme) | dme14079 | CG10198-PA (FBgn0039120) | |
Danio rerio (Dre) | dre13981 | ENSDARP00000010304 (zgc:63593) | Q6PD87 |
Encephalitozoon cuniculi (Ecu) | ecu46 | 19073967 | |
Takifugu rubripes (Fru) | fru19513 | SINFRUP00000147124 | |
Gallus gallus (Gga) | gga26662 | ENSGALP00000022023 (NUP98) | |
Homo sapiens (Hsa) | hsa5003 | ENSP00000316032 (NUP98) | P52948-5 |
Homo sapiens (Hsa) | hsa5005 | ENSP00000347404 (NUP98) | P52948-2 |
Homo sapiens (Hsa) | hsa5004 | ENSP00000352091 (NUP98) | P52948-1 |
Kluyveromyces lactis (Kla) | kla5268 | KLLA0F26697g | |
Mus musculus (Mmu) | mmu24572 | ENSMUSP00000033294 | |
Mus musculus (Mmu) | mmu31023 | ENSMUSP00000068530 (MGI:109404) | Q6PFD9 |
Mus musculus (Mmu) | mmu24571 | ENSMUSP00000069925 | |
Mus musculus (Mmu) | mmu24573 | ENSMUSP00000074145 | |
Neurospora crassa (Ncr) | ncr4648 | NCU04784.2 | |
Oryza sativa (Osa) | osa46532 | 5709.m00124 | |
Oryza sativa (Osa) | osa46534 | 5709.m00126 | |
Oryza sativa (Osa) | osa64958 | 6813.m00141 | |
Oryza sativa (Osa) | osa73507 | 7275.m00169 | |
Plasmodium falciparum (Pfa) | pfa4517 | PFI0250c | |
Rattus norvegicus (Rno) | rno2469 | ENSRNOP00000027546 | |
Rattus norvegicus (Rno) | rno2470 | ENSRNOP00000027575 (RGD:71033) | |
Rattus norvegicus (Rno) | rno2471 | ENSRNOP00000027590 (RGD:71033) | P49793 |
Saccharomyces cerevisiae (Sce) | sce3733 | YKL068W (S000001551) | |
Saccharomyces cerevisiae (Sce) | sce4798 | YMR047C (S000004650) | |
Schizosaccharomyces pombe (Spo) | spo3220 | SPAC1486.05 | Q9UTK4 |
Yarrowia lipolytica (Yli) | yli3448 | YALI0D17886g | |
Yarrowia lipolytica (Yli) | yli6524 | YALI0F28281g |
GO ID | GO term | GO aspect | Evidence codes and associations | ||||||||||||||||
GO:0005634 | nucleus | C |
| ||||||||||||||||
GO:0005643 | nuclear pore | C |
| ||||||||||||||||
GO:0005654 | nucleoplasm | C |
| ||||||||||||||||
GO:0031080 | Nup107-160 complex | C |
| ||||||||||||||||
GO:0031965 | nuclear membrane | C |
| ||||||||||||||||
GO:0055126 | Nup82 complex | C |
| ||||||||||||||||
GO:0005198 | structural molecule activity | F |
| ||||||||||||||||
GO:0005215 | transporter activity | F |
| ||||||||||||||||
GO:0005515 | protein binding | F |
| ||||||||||||||||
GO:0008233 | peptidase activity | F |
| ||||||||||||||||
GO:0015288 | porin activity | F |
| ||||||||||||||||
GO:0042277 | peptide binding | F |
| ||||||||||||||||
GO:0000003 | reproduction | P |
| ||||||||||||||||
GO:0000059 | protein import into nucleus, docking | P |
| ||||||||||||||||
GO:0002119 | nematode larval development | P |
| ||||||||||||||||
GO:0006388 | tRNA splicing, via endonucleolytic cleavage and ligation | P |
| ||||||||||||||||
GO:0006406 | mRNA export from nucleus | P |
| ||||||||||||||||
GO:0006407 | rRNA export from nucleus | P |
| ||||||||||||||||
GO:0006408 | snRNA export from nucleus | P |
| ||||||||||||||||
GO:0006409 | tRNA export from nucleus | P |
| ||||||||||||||||
GO:0006606 | protein import into nucleus | P |
| ||||||||||||||||
GO:0006607 | NLS-bearing substrate import into nucleus | P |
| ||||||||||||||||
GO:0006608 | snRNP protein import into nucleus | P |
| ||||||||||||||||
GO:0006609 | mRNA-binding (hnRNP) protein import into nucleus | P |
| ||||||||||||||||
GO:0006610 | ribosomal protein import into nucleus | P |
| ||||||||||||||||
GO:0006611 | protein export from nucleus | P |
| ||||||||||||||||
GO:0006911 | phagocytosis, engulfment | P |
| ||||||||||||||||
GO:0006913 | nucleocytoplasmic transport | P |
| ||||||||||||||||
GO:0006997 | nucleus organization | P |
| ||||||||||||||||
GO:0006999 | nuclear pore organization | P |
| ||||||||||||||||
GO:0007052 | mitotic spindle organization | P |
| ||||||||||||||||
GO:0009733 | response to auxin stimulus | P |
| ||||||||||||||||
GO:0009792 | embryo development ending in birth or egg hatching | P |
| ||||||||||||||||
GO:0009870 | defense response signaling pathway, resistance gene-dependent | P |
| ||||||||||||||||
GO:0009910 | negative regulation of flower development | P |
| ||||||||||||||||
GO:0040007 | growth | P |
| ||||||||||||||||
GO:0040039 | inductive cell migration | P |
| ||||||||||||||||
GO:0045184 | establishment of protein localization | P |
| ||||||||||||||||
GO:0051301 | cell division | P |
|
Curated yeast ortholog results:
S. pombe systematic ID | S. cerevisiae systematic ID |
SPAC1486.05 (Q9UTK4) | YMR047C (S000004650) |
GO ID | GO term | GO aspect | Evidence codes and associations | ||||||||
GO:0005643 | nuclear pore | C |
| ||||||||
GO:0031080 | Nup107-160 complex | C |
| ||||||||
GO:0031965 | nuclear membrane | C |
| ||||||||
GO:0055126 | Nup82 complex | C |
| ||||||||
GO:0005198 | structural molecule activity | F |
| ||||||||
GO:0005515 | protein binding | F |
| ||||||||
GO:0008233 | peptidase activity | F |
| ||||||||
GO:0006388 | tRNA splicing, via endonucleolytic cleavage and ligation | P |
| ||||||||
GO:0006406 | mRNA export from nucleus | P |
| ||||||||
GO:0006407 | rRNA export from nucleus | P |
| ||||||||
GO:0006408 | snRNA export from nucleus | P |
| ||||||||
GO:0006409 | tRNA export from nucleus | P |
| ||||||||
GO:0006606 | protein import into nucleus | P |
| ||||||||
GO:0006607 | NLS-bearing substrate import into nucleus | P |
| ||||||||
GO:0006608 | snRNP protein import into nucleus | P |
| ||||||||
GO:0006609 | mRNA-binding (hnRNP) protein import into nucleus | P |
| ||||||||
GO:0006610 | ribosomal protein import into nucleus | P |
| ||||||||
GO:0006611 | protein export from nucleus | P |
| ||||||||
GO:0006913 | nucleocytoplasmic transport | P |
| ||||||||
GO:0006997 | nucleus organization | P |
| ||||||||
GO:0006999 | nuclear pore organization | P |
| ||||||||
GO:0045184 | establishment of protein localization | P |
| ||||||||
GO:0051301 | cell division | P |
|
YOGY Home | YOGY Help |
s.khadayate@ucl.ac.uk |