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Search term: YMR048W

Gene summary:

Species Saccharomyces cerevisiae (Sce)
Primary name CSM3
SGD link S000004651
Alternative ID YMR048W
Description Protein required for accurate chromosome segregation during meiosis
Synonyms YMR048W
Datasets
KOGs
Inparanoid
HomoloGene
OrthoMCL
Curated

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GO info in one table:

KOG results:

KOG name Phylogenetic pattern
(and link to KOGs with this pattern)
KOG3004 ACDHYP-

KOGs classification KOGs description
CELLULAR PROCESSES AND SIGNALING Meiotic chromosome segregation protein

Species KOG link NCBI link UniProt link
Arabidopsis thaliana (Ath) At3g02820 GI:15232988
Caenorhabditis elegans (Cel) CE20718
(WBGene00017738)		 GI:17506777 Q9TXI0
Drosophila melanogaster (Dme) 7298470 GI:7298470
Homo sapiens (Hsa) Hs8923485 GI:8923485
Saccharomyces cerevisiae (Sce) YMR048w
(S000004651)		 GI:6323692 Q04659
Schizosaccharomyces pombe (Spo) SPBC30D10.04 GI:19113073 O14350


GO terms for KOG results:

GO ID GO term GO aspect Evidence codes and associations
GO:0005634 nucleus C
IDA
SceS000004651
SpoSPBC30D10.04
GO:0005739 mitochondrion C
IDA
SpoSPBC30D10.04
GO:0031298 replication fork protection complex C
IDA
SceS000004651
TAS
SpoSPBC30D10.04
GO:0043596 nuclear replication fork C
IC
SpoSPBC30D10.04
GO:0003674 molecular_function F
ND
SceS000004651
GO:0003676 nucleic acid binding F
ISS
AthAt3g02820
GO:0005515 protein binding F
IPI
SpoSPBC30D10.04
GO:0000076 DNA replication checkpoint P
IGI
SceS000004651
GO:0006281 DNA repair P
IGI
SceS000004651
IMP
SceS000004651
GO:0007064 mitotic sister chromatid cohesion P
IGI
SceS000004651
IMP
SceS000004651
GO:0007531 mating type determination P
IMP
SpoSPBC30D10.04
GO:0034087 establishment of mitotic sister chromatid
cohesion		 P
IGI
SceS000004651
IMP
SceS000004651
GO:0043111 replication fork arrest P
IC
SpoSPBC30D10.04
IMP
SceS000004651
GO:0043570 maintenance of DNA repeat elements P
IMP
SceS000004651
GO:0045132 meiotic chromosome segregation P
IMP
SceS000004651
GO:0048478 replication fork protection P
IMP
SceS000004651
TAS
SpoSPBC30D10.04

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HomoloGene results:

HomoloGene cluster Phylogenetic pattern
39902

Species Gene ID NCBI link UniProt link
Saccharomyces cerevisiae (Sce) CSM3
(S000004651)		 GI:6323692 Q04659
Kluyveromyces lactis (Kla) KLLA0F26675g GI:50312467


GO terms for Homologene results:

GO ID GO term GO aspect Evidence codes and associations
GO:0005634 nucleus C
IDA
SceS000004651
GO:0031298 replication fork protection complex C
IDA
SceS000004651
GO:0003674 molecular_function F
ND
SceS000004651
GO:0000076 DNA replication checkpoint P
IGI
SceS000004651
GO:0006281 DNA repair P
IGI
SceS000004651
IMP
SceS000004651
GO:0007064 mitotic sister chromatid cohesion P
IGI
SceS000004651
IMP
SceS000004651
GO:0034087 establishment of mitotic sister chromatid
cohesion		 P
IGI
SceS000004651
IMP
SceS000004651
GO:0043111 replication fork arrest P
IMP
SceS000004651
GO:0043570 maintenance of DNA repeat elements P
IMP
SceS000004651
GO:0045132 meiotic chromosome segregation P
IMP
SceS000004651
GO:0048478 replication fork protection P
IMP
SceS000004651

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OrthoMCL results:

Selected databases only

OrthoMCL cluster Phylogenetic pattern
OG1_4524

Species OrthoMCL
sequence		 Model organism
protein page		 UniProt link
Ashbya gossypii (Ago) ago692 ABR100W
Arabidopsis thaliana (Ath) ath12301 At3g02820.1
Caenorhabditis elegans (Cel) cel7121 F23C8.9
(CE20718;
WBGene00017738)
Candida glabrata (Cgl) cgl1495 CAGL0F06149g
Debaryomyces hansenii (Dha) dha4634 DEHA0F05522g
Drosophila melanogaster (Dme) dme2855 CG10336-PA
(FBgn0032698)
Drosophila melanogaster (Dme) dme2854 CG10336-PB
(FBgn0032698)
Danio rerio (Dre) dre30494 ENSDARP00000043150
Danio rerio (Dre) dre21548 ENSDARP00000047127
Takifugu rubripes (Fru) fru5499 SINFRUP00000153490
Gallus gallus (Gga) gga4170 ENSGALP00000012365
(TIPIN)		 Q5F416
Homo sapiens (Hsa) hsa10808 ENSP00000261881
(TIPIN)		 Q9BVW5
Kluyveromyces lactis (Kla) kla5267 KLLA0F26675g
Mus musculus (Mmu) mmu27796 ENSMUSP00000034964
(MGI:1921571)		 Q91WA1
Neurospora crassa (Ncr) ncr1808 NCU01858.2
Oryza sativa (Osa) osa29608 4331.m00199
Saccharomyces cerevisiae (Sce) sce4799 YMR048W
(S000004651)
Schizosaccharomyces pombe (Spo) spo3786 SPBC30D10.04 O14350
Yarrowia lipolytica (Yli) yli4372 YALI0E12287g


GO terms for OrthoMCL results:

GO ID GO term GO aspect Evidence codes and associations
GO:0005634 nucleus C
IDA
MmuMGI:1921571
SceS000004651
SpoSPBC30D10.04
GO:0005737 cytoplasm C
IDA
MmuMGI:1921571
GO:0005739 mitochondrion C
IDA
SpoSPBC30D10.04
GO:0031298 replication fork protection complex C
IDA
SceS000004651
TAS
SpoSPBC30D10.04
GO:0043596 nuclear replication fork C
IC
SpoSPBC30D10.04
GO:0003674 molecular_function F
ND
DmeFBgn0032698
SceS000004651
GO:0003676 nucleic acid binding F
ISS
AthAt3g02820
GO:0005515 protein binding F
IPI
MmuMGI:1921571
SpoSPBC30D10.04
GO:0000076 DNA replication checkpoint P
IGI
SceS000004651
GO:0000077 DNA damage checkpoint P
IMP
MmuMGI:1921571
GO:0006281 DNA repair P
IGI
SceS000004651
IMP
SceS000004651
GO:0007064 mitotic sister chromatid cohesion P
IGI
SceS000004651
IMP
SceS000004651
GO:0007531 mating type determination P
IMP
SpoSPBC30D10.04
GO:0009411 response to UV P
IMP
MmuMGI:1921571
GO:0034087 establishment of mitotic sister chromatid
cohesion		 P
IGI
SceS000004651
IMP
SceS000004651
GO:0043111 replication fork arrest P
IC
SpoSPBC30D10.04
IMP
SceS000004651
GO:0043570 maintenance of DNA repeat elements P
IMP
SceS000004651
GO:0045132 meiotic chromosome segregation P
IMP
SceS000004651
GO:0048478 replication fork protection P
IMP
SceS000004651
TAS
SpoSPBC30D10.04

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Curated yeast ortholog results:

S. pombe
systematic ID		 S. cerevisiae
systematic ID
SPBC30D10.04
(O14350)		 YMR048W
(S000004651)


GO terms for curated homolog results:

GO ID GO term GO aspect Evidence codes and associations
GO:0005634 nucleus C
IDA
SceS000004651
SpoSPBC30D10.04
GO:0005739 mitochondrion C
IDA
SpoSPBC30D10.04
GO:0031298 replication fork protection complex C
IDA
SceS000004651
TAS
SpoSPBC30D10.04
GO:0043596 nuclear replication fork C
IC
SpoSPBC30D10.04
GO:0003674 molecular_function F
ND
SceS000004651
GO:0005515 protein binding F
IPI
SpoSPBC30D10.04
GO:0000076 DNA replication checkpoint P
IGI
SceS000004651
GO:0006281 DNA repair P
IGI
SceS000004651
IMP
SceS000004651
GO:0007064 mitotic sister chromatid cohesion P
IGI
SceS000004651
IMP
SceS000004651
GO:0007531 mating type determination P
IMP
SpoSPBC30D10.04
GO:0034087 establishment of mitotic sister chromatid
cohesion		 P
IGI
SceS000004651
IMP
SceS000004651
GO:0043111 replication fork arrest P
IC
SpoSPBC30D10.04
IMP
SceS000004651
GO:0043570 maintenance of DNA repeat elements P
IMP
SceS000004651
GO:0045132 meiotic chromosome segregation P
IMP
SceS000004651
GO:0048478 replication fork protection P
IMP
SceS000004651
TAS
SpoSPBC30D10.04

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GO info in one table:

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