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Search term: YMR077C

Gene summary:

Species Saccharomyces cerevisiae (Sce)
Primary name VPS20
SGD link S000004682
Alternative ID YMR077C
Description Myristoylated subunit of ESCRTIII, the endosomal sorting complex required for transport of transmembrane proteins into the multivesicular body pathway to the lysosomal/vacuolar lumen; cytoplasmic protein recruited to endosomal membranes
Synonyms YMR077C
Datasets
KOGs
Inparanoid
HomoloGene
OrthoMCL
Curated

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Search for GO info:  

GO info in one table:

KOG results:

KOG name Phylogenetic pattern
(and link to KOGs with this pattern)
KOG2910 ACDHYP-

KOGs classification KOGs description
POORLY CHARACTERIZED Uncharacterized conserved protein predicted to be involved in protein sorting

Species KOG link NCBI link UniProt link
Arabidopsis thaliana (Ath) At5g09260 GI:15242368
Arabidopsis thaliana (Ath) At5g63880 GI:10177676
Caenorhabditis elegans (Cel) CE22731
(WBGene00022027)		 GI:17510379 Q9BL60
Drosophila melanogaster (Dme) 7291437 GI:7291437 Q9W236
Homo sapiens (Hsa) Hs13375783 GI:13375783
Saccharomyces cerevisiae (Sce) YMR077c
(S000004682)		 GI:6323723 Q04272
Schizosaccharomyces pombe (Spo) SPBC215.14c GI:19113483 O94318


GO terms for KOG results:

GO ID GO term GO aspect Evidence codes and associations
GO:0000815 ESCRT III complex C
IDA
SceS000004682
ISS
AthAt5g09260
At5g63880
SpoSPBC215.14c
GO:0005737 cytoplasm C
IDA
SceS000004682
GO:0005886 plasma membrane C
IDA
AthAt5g63880
At5g09260
GO:0005938 cell cortex C
IDA
SpoSPBC215.14c
GO:0003674 molecular_function F
ND
SpoSPBC215.14c
GO:0005515 protein binding F
IDA
SceS000004682
GO:0002119 nematode larval development P
IMP
CelWBGene00022027
GO:0006914 autophagy P
RCA
SceS000004682
GO:0008340 determination of adult lifespan P
IMP
CelWBGene00022027
GO:0010171 body morphogenesis P
IMP
CelWBGene00022027
GO:0016192 vesicle-mediated transport P
ISS
AthAt5g63880
At5g09260
GO:0032940 secretion by cell P
IMP
CelWBGene00022027
GO:0040007 growth P
IMP
CelWBGene00022027
GO:0040010 positive regulation of growth rate P
IMP
CelWBGene00022027
GO:0040011 locomotion P
IMP
CelWBGene00022027
GO:0043162 ubiquitin-dependent protein catabolic process via
the multivesicular body sorting
pathway		 P
IC
SceS000004682
GO:0043328 protein targeting to vacuole involved in
ubiquitin-dependent protein catabolic process via
the multivesicular body sorting
pathway		 P
IMP
SpoSPBC215.14c
GO:0045184 establishment of protein localization P
RCA
SceS000004682
GO:0045324 late endosome to vacuole transport P
IMP
SceS000004682
SpoSPBC215.14c
IPI
SceS000004682
GO:0050801 ion homeostasis P
RCA
SceS000004682
GO:0070676 intralumenal vesicle formation P
IMP
SceS000004682

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HomoloGene results:

HomoloGene cluster Phylogenetic pattern
11607

Species Gene ID NCBI link UniProt link
Homo sapiens (Hsa) CHMP6 GI:31542673
Pan troglodytes (Ptr) CHMP6 GI:114670960
Canis familiaris (Cfa) CHMP6 GI:73964851
Mus musculus (Mmu) Chmp6
(MGI:3583942)		 GI:82935435 B1AZ39
Rattus norvegicus (Rno) Chmp6 GI:34875612
Gallus gallus (Gga) CHMP6 GI:71895827
Drosophila melanogaster (Dme) Vps20 GI:24658229
Anopheles gambiae (Aga) AgaP_AGAP006229 GI:158295586
Caenorhabditis elegans (Cel) Y65B4A.3
(CE22731;
WBGene00022027)		 GI:17510379 Q9BL60
Schizosaccharomyces pombe (Spo) vps20
(SPBC215.14c)		 GI:19113483 O94318
Saccharomyces cerevisiae (Sce) VPS20
(S000004682)		 GI:6323723 Q04272
Kluyveromyces lactis (Kla) KLLA0F09295g GI:50310961
Eremothecium gossypii (Ego) AGOS_AGR014W GI:45201109
Magnaporthe grisea (Mgr) MGG_02515 GI:39968845
Arabidopsis thaliana (Ath) VPS20.2 GI:15242368
Arabidopsis thaliana (Ath) VPS20.1 GI:18424760
Oryza sativa (Osa) Os02g0596500 GI:115447085


GO terms for Homologene results:

GO ID GO term GO aspect Evidence codes and associations
GO:0000815 ESCRT III complex C
IDA
SceS000004682
ISS
AthVPS20.2
VPS20.1
SpoSPBC215.14c
GO:0005575 cellular_component C
ND
MmuMGI:3583942
GO:0005737 cytoplasm C
IDA
SceS000004682
GO:0005886 plasma membrane C
IDA
AthVPS20.2
VPS20.1
GO:0005938 cell cortex C
IDA
SpoSPBC215.14c
GO:0003674 molecular_function F
ND
MmuMGI:3583942
SpoSPBC215.14c
GO:0005515 protein binding F
IDA
SceS000004682
IPI
HsaCHMP6
GO:0047485 protein N-terminus binding F
IPI
HsaCHMP6
GO:0002119 nematode larval development P
IMP
CelWBGene00022027
GO:0006914 autophagy P
RCA
SceS000004682
GO:0008150 biological_process P
ND
MmuMGI:3583942
GO:0008340 determination of adult lifespan P
IMP
CelWBGene00022027
GO:0010171 body morphogenesis P
IMP
CelWBGene00022027
GO:0016192 vesicle-mediated transport P
ISS
AthVPS20.2
VPS20.1
GO:0032940 secretion by cell P
IMP
CelWBGene00022027
GO:0040007 growth P
IMP
CelWBGene00022027
GO:0040010 positive regulation of growth rate P
IMP
CelWBGene00022027
GO:0040011 locomotion P
IMP
CelWBGene00022027
GO:0043162 ubiquitin-dependent protein catabolic process via
the multivesicular body sorting
pathway		 P
IC
SceS000004682
GO:0043328 protein targeting to vacuole involved in
ubiquitin-dependent protein catabolic process via
the multivesicular body sorting
pathway		 P
IMP
SpoSPBC215.14c
GO:0045184 establishment of protein localization P
RCA
SceS000004682
GO:0045324 late endosome to vacuole transport P
IMP
SceS000004682
SpoSPBC215.14c
IPI
SceS000004682
GO:0050801 ion homeostasis P
RCA
SceS000004682
GO:0070676 intralumenal vesicle formation P
IMP
SceS000004682

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OrthoMCL results:

Selected databases only

OrthoMCL cluster Phylogenetic pattern
OG1_3811

Species OrthoMCL
sequence		 Model organism
protein page		 UniProt link
Anopheles gambiae (Aga) aga1701 ENSANGP00000020614
Ashbya gossypii (Ago) ago4324 AGR014W
Arabidopsis thaliana (Ath) ath23116 At5g09260.1
Arabidopsis thaliana (Ath) ath28513 At5g63880.1
Caenorhabditis elegans (Cel) cel20276 Y65B4A.3
(CE22731;
WBGene00022027)
Candida glabrata (Cgl) cgl845 CAGL0D04246g
Dictyostelium discoideum (Ddi) ddi9384 DDB0218879
Debaryomyces hansenii (Dha) dha4217 DEHA0E22154g
Drosophila melanogaster (Dme) dme6556 CG4071-PA
(FBgn0034744)
Danio rerio (Dre) dre28555 ENSDARP00000012210
(flj11749l)		 Q503V0
Takifugu rubripes (Fru) fru28916 SINFRUP00000144541
Takifugu rubripes (Fru) fru24208 SINFRUP00000163585
Gallus gallus (Gga) gga16434 ENSGALP00000011201
Homo sapiens (Hsa) hsa14488 ENSP00000317468
(CHMP6)		 Q96FZ7
Kluyveromyces lactis (Kla) kla4503 KLLA0F09295g
Mus musculus (Mmu) mmu5287 ENSMUSP00000026434
(MGI:3583942)		 P0C0A3
Oryza sativa (Osa) osa7336 2500.m00130
Rattus norvegicus (Rno) rno6537 ENSRNOP00000005379
(RGD:1565325)
Saccharomyces cerevisiae (Sce) sce4830 YMR077C
(S000004682)
Schizosaccharomyces pombe (Spo) spo4216 SPBC215.14c O94318
Yarrowia lipolytica (Yli) yli6241 YALI0F21307g


GO terms for OrthoMCL results:

GO ID GO term GO aspect Evidence codes and associations
GO:0000815 ESCRT III complex C
IDA
SceS000004682
ISS
AthAt5g09260
At5g63880
SpoSPBC215.14c
GO:0005575 cellular_component C
ND
MmuMGI:3583942
GO:0005737 cytoplasm C
IDA
SceS000004682
GO:0005886 plasma membrane C
IDA
AthAt5g63880
At5g09260
GO:0005938 cell cortex C
IDA
SpoSPBC215.14c
GO:0003674 molecular_function F
ND
MmuMGI:3583942
SpoSPBC215.14c
GO:0005515 protein binding F
IDA
SceS000004682
GO:0002119 nematode larval development P
IMP
CelWBGene00022027
GO:0006914 autophagy P
RCA
SceS000004682
GO:0008150 biological_process P
ND
MmuMGI:3583942
GO:0008340 determination of adult lifespan P
IMP
CelWBGene00022027
GO:0010171 body morphogenesis P
IMP
CelWBGene00022027
GO:0016192 vesicle-mediated transport P
ISS
AthAt5g63880
At5g09260
GO:0032940 secretion by cell P
IMP
CelWBGene00022027
GO:0040007 growth P
IMP
CelWBGene00022027
GO:0040010 positive regulation of growth rate P
IMP
CelWBGene00022027
GO:0040011 locomotion P
IMP
CelWBGene00022027
GO:0043162 ubiquitin-dependent protein catabolic process via
the multivesicular body sorting
pathway		 P
IC
SceS000004682
GO:0043328 protein targeting to vacuole involved in
ubiquitin-dependent protein catabolic process via
the multivesicular body sorting
pathway		 P
IMP
SpoSPBC215.14c
GO:0045184 establishment of protein localization P
RCA
SceS000004682
GO:0045324 late endosome to vacuole transport P
IMP
SceS000004682
SpoSPBC215.14c
IPI
SceS000004682
GO:0050801 ion homeostasis P
RCA
SceS000004682
GO:0070676 intralumenal vesicle formation P
IMP
SceS000004682

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Curated yeast ortholog results:

S. pombe
systematic ID		 S. cerevisiae
systematic ID
SPBC215.14c
(O94318)		 YMR077C
(S000004682)


GO terms for curated homolog results:

GO ID GO term GO aspect Evidence codes and associations
GO:0000815 ESCRT III complex C
IDA
SceS000004682
ISS
SpoSPBC215.14c
GO:0005737 cytoplasm C
IDA
SceS000004682
GO:0005938 cell cortex C
IDA
SpoSPBC215.14c
GO:0003674 molecular_function F
ND
SpoSPBC215.14c
GO:0005515 protein binding F
IDA
SceS000004682
GO:0006914 autophagy P
RCA
SceS000004682
GO:0043162 ubiquitin-dependent protein catabolic process via
the multivesicular body sorting
pathway		 P
IC
SceS000004682
GO:0043328 protein targeting to vacuole involved in
ubiquitin-dependent protein catabolic process via
the multivesicular body sorting
pathway		 P
IMP
SpoSPBC215.14c
GO:0045184 establishment of protein localization P
RCA
SceS000004682
GO:0045324 late endosome to vacuole transport P
IMP
SceS000004682
SpoSPBC215.14c
IPI
SceS000004682
GO:0050801 ion homeostasis P
RCA
SceS000004682
GO:0070676 intralumenal vesicle formation P
IMP
SceS000004682

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Query species:

Include wild-cards:   

Search for GO info:  

GO info in one table:

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