YOGY Home YOGY Help

Search term: YMR091C

Gene summary:

Species Saccharomyces cerevisiae (Sce)
Primary name NPL6
SGD link S000004697
Alternative ID YMR091C
Description Component of the RSC chromatin remodeling complex; interacts with Rsc3p, Rsc30p, Ldb7p, and Htl1p to form a module important for a broad range of RSC functions; involved in nuclear protein import and maintenance of proper telomere length
Synonyms YMR091C
Datasets
KOGs
Inparanoid
HomoloGene
OrthoMCL
Curated

Search for gene by ID or name:

Query species:

Include wild-cards:   

Search for GO info:  

GO info in one table:

HomoloGene results:

HomoloGene cluster Phylogenetic pattern
6627

Species Gene ID NCBI link UniProt link
Schizosaccharomyces pombe (Spo) rsc7
(SPCC1281.05)		 GI:19075669 O94522
Saccharomyces cerevisiae (Sce) NPL6
(S000004697)		 GI:6323738
Kluyveromyces lactis (Kla) KLLA0F13728g GI:50311347
Eremothecium gossypii (Ego) AGOS_ABL042W GI:45185188
Magnaporthe grisea (Mgr) MGG_05378 GI:145615095
Neurospora crassa (Ncr) NCU07290.1 GI:32414193


GO terms for Homologene results:

GO ID GO term GO aspect Evidence codes and associations
GO:0000790 nuclear chromatin C
IC
SpoSPCC1281.05
GO:0005634 nucleus C
IDA
SceS000004697
SpoSPCC1281.05
ISS
SpoSPCC1281.05
GO:0016586 RSC complex C
IDA
SceS000004697
SpoSPCC1281.05
IPI
SceS000004697
GO:0003674 molecular_function F
ND
SpoSPCC1281.05
GO:0008094 DNA-dependent ATPase activity F
IDA
SceS000004697
GO:0006337 nucleosome disassembly P
IDA
SceS000004697
GO:0006338 chromatin remodeling P
IPI
SceS000004697
ISS
SpoSPCC1281.05
GO:0006368 RNA elongation from RNA polymerase II
promoter		 P
IDA
SceS000004697
ISS
SpoSPCC1281.05
GO:0006606 protein import into nucleus P
IMP
SceS000004697
GO:0006974 response to DNA damage stimulus P
IMP
SceS000004697
GO:0032569 gene-specific transcription from RNA polymerase II
promoter		 P
IC
SpoSPCC1281.05
GO:0043044 ATP-dependent chromatin remodeling P
IDA
SceS000004697

Back to the top

OrthoMCL results:

Selected databases only

OrthoMCL cluster Phylogenetic pattern
OG1_13149

Species OrthoMCL
sequence		 Model organism
protein page		 UniProt link
Ashbya gossypii (Ago) ago550 ABL042W
Candida glabrata (Cgl) cgl3049 CAGL0J01309g
Cryptococcus neoformans (Cne) cne2098 181.m08087
Debaryomyces hansenii (Dha) dha3928 DEHA0E15477g
Kluyveromyces lactis (Kla) kla4698 KLLA0F13728g
Neurospora crassa (Ncr) ncr7096 NCU07290.2
Saccharomyces cerevisiae (Sce) sce4845 YMR091C
(S000004697)
Schizosaccharomyces pombe (Spo) spo2656 SPCC1281.05 O94522
Yarrowia lipolytica (Yli) yli2226 YALI0C12342g


GO terms for OrthoMCL results:

GO ID GO term GO aspect Evidence codes and associations
GO:0000790 nuclear chromatin C
IC
SpoSPCC1281.05
GO:0005634 nucleus C
IDA
SceS000004697
SpoSPCC1281.05
ISS
SpoSPCC1281.05
GO:0016586 RSC complex C
IDA
SceS000004697
SpoSPCC1281.05
IPI
SceS000004697
GO:0003674 molecular_function F
ND
SpoSPCC1281.05
GO:0008094 DNA-dependent ATPase activity F
IDA
SceS000004697
GO:0006337 nucleosome disassembly P
IDA
SceS000004697
GO:0006338 chromatin remodeling P
IPI
SceS000004697
ISS
SpoSPCC1281.05
GO:0006368 RNA elongation from RNA polymerase II
promoter		 P
IDA
SceS000004697
ISS
SpoSPCC1281.05
GO:0006606 protein import into nucleus P
IMP
SceS000004697
GO:0006974 response to DNA damage stimulus P
IMP
SceS000004697
GO:0032569 gene-specific transcription from RNA polymerase II
promoter		 P
IC
SpoSPCC1281.05
GO:0043044 ATP-dependent chromatin remodeling P
IDA
SceS000004697

Back to the top

Curated yeast ortholog results:

S. pombe
systematic ID		 S. cerevisiae
systematic ID
SPCC1281.05
(O94522)		 YMR091C
(S000004697)


GO terms for curated homolog results:

GO ID GO term GO aspect Evidence codes and associations
GO:0000790 nuclear chromatin C
IC
SpoSPCC1281.05
GO:0005634 nucleus C
IDA
SceS000004697
SpoSPCC1281.05
ISS
SpoSPCC1281.05
GO:0016586 RSC complex C
IDA
SceS000004697
SpoSPCC1281.05
IPI
SceS000004697
GO:0003674 molecular_function F
ND
SpoSPCC1281.05
GO:0008094 DNA-dependent ATPase activity F
IDA
SceS000004697
GO:0006337 nucleosome disassembly P
IDA
SceS000004697
GO:0006338 chromatin remodeling P
IPI
SceS000004697
ISS
SpoSPCC1281.05
GO:0006368 RNA elongation from RNA polymerase II
promoter		 P
IDA
SceS000004697
ISS
SpoSPCC1281.05
GO:0006606 protein import into nucleus P
IMP
SceS000004697
GO:0006974 response to DNA damage stimulus P
IMP
SceS000004697
GO:0032569 gene-specific transcription from RNA polymerase II
promoter		 P
IC
SpoSPCC1281.05
GO:0043044 ATP-dependent chromatin remodeling P
IDA
SceS000004697

Back to the top
YOGY Home YOGY Help

Search for gene by ID or name:

Query species:

Include wild-cards:   

Search for GO info:  

GO info in one table:

s.khadayate@ucl.ac.uk