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Search term: YMR121C

Gene summary:

Species Saccharomyces cerevisiae (Sce)
Primary name RPL15B
SGD link S000004728
Alternative ID YMR121C
Description Protein component of the large (60S) ribosomal subunit, nearly identical to Rpl15Ap and has similarity to rat L15 ribosomal protein; binds to 5.8 S rRNA
Synonyms YMR121C
Datasets
KOGs
Inparanoid
HomoloGene
OrthoMCL
Curated

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GO info in one table:

KOG results:

KOG name Phylogenetic pattern
(and link to KOGs with this pattern)
KOG1678 ACDHYPE

KOGs classification KOGs description
INFORMATION STORAGE AND PROCESSING 60s ribosomal protein L15

Species KOG link NCBI link UniProt link
Arabidopsis thaliana (Ath) At4g16720 GI:15235851
Arabidopsis thaliana (Ath) At4g17390 GI:15236049
Caenorhabditis elegans (Cel) CE12148
(WBGene00004427)		 GI:17541432 P91374
Drosophila melanogaster (Dme) 7289089 GI:3122682
Homo sapiens (Hsa) Hs15431293 GI:13385036
Homo sapiens (Hsa) Hs17449531 GI:17449531
Homo sapiens (Hsa) Hs17453926 GI:17453926
Homo sapiens (Hsa) Hs20532993 GI:20532993
Homo sapiens (Hsa) Hs20556105 GI:20556105
Homo sapiens (Hsa) Hs22050588 GI:22050588
Homo sapiens (Hsa) Hs22070032 GI:22070032
Saccharomyces cerevisiae (Sce) YLR029c
(S000004019)		 GI:6323057 P05748
Saccharomyces cerevisiae (Sce) YMR121c
(S000004728)		 GI:6323769 P54780
Schizosaccharomyces pombe (Spo) SPAC1783.08c GI:19114575 Q9US22
Schizosaccharomyces pombe (Spo) SPCC576.11 GI:19075938 O74895
Encephalitozoon cuniculi (Ecu) ECU11g1380i GI:19074938 Q8SQU2


GO terms for KOG results:

GO ID GO term GO aspect Evidence codes and associations
GO:0005634 nucleus C
IDA
SpoSPCC576.11
SPAC1783.08c
GO:0005730 nucleolus C
IDA
AthAt4g17390
SpoSPAC1783.08c
SPCC576.11
GO:0005840 ribosome C
ISS
AthAt4g17390
At4g16720
GO:0005886 plasma membrane C
IDA
AthAt4g16720
GO:0016020 membrane C
IDA
AthAt4g17390
GO:0022625 cytosolic large ribosomal subunit C
IDA
AthAt4g17390
At4g16720
SceS000004728
S000004019
ISS
SpoSPAC1783.08c
SPCC576.11
GO:0022626 cytosolic ribosome C
IDA
AthAt4g16720
GO:0003723 RNA binding F
IDA
SceS000004019
S000004728
GO:0003735 structural constituent of ribosome F
IDA
SceS000004019
S000004728
ISS
AthAt4g17390
At4g16720
SpoSPAC1783.08c
SPCC576.11
GO:0000003 reproduction P
IMP
CelWBGene00004427
GO:0002119 nematode larval development P
IMP
CelWBGene00004427
GO:0006412 translation P
IDA
SceS000004728
S000004019
ISS
AthAt4g17390
At4g16720
SpoSPCC576.11
SPAC1783.08c
GO:0009792 embryo development ending in birth or egg
hatching		 P
IMP
CelWBGene00004427
GO:0018996 molting cycle, collagen and cuticulin-based
cuticle		 P
IMP
CelWBGene00004427
GO:0040007 growth P
IMP
CelWBGene00004427
GO:0040010 positive regulation of growth rate P
IMP
CelWBGene00004427
GO:0040018 positive regulation of multicellular organism
growth		 P
IMP
CelWBGene00004427

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HomoloGene results:

HomoloGene cluster Phylogenetic pattern
37713

Species Gene ID NCBI link UniProt link
Homo sapiens (Hsa) RPL15 GI:15431293
Pan troglodytes (Ptr) RPL15 GI:114586199
Canis familiaris (Cfa) RPL15 GI:73989980
Mus musculus (Mmu) Gm4294 GI:149262861
Rattus norvegicus (Rno) Rpl15
(RGD:621181)		 GI:20806169
Gallus gallus (Gga) RPL15 GI:118085932
Drosophila melanogaster (Dme) RpL15 GI:161076131
Anopheles gambiae (Aga) AgaP_AGAP004919 GI:118785936
Caenorhabditis elegans (Cel) rpl-15
(CE12148;
WBGene00004427)		 GI:17541432 P91374
Schizosaccharomyces pombe (Spo) rpl15-2
(SPAC1783.08c)		 GI:19114575 Q9US22
Schizosaccharomyces pombe (Spo) rpl15
(SPCC576.11)		 GI:19075938 O74895
Saccharomyces cerevisiae (Sce) RPL15A
(S000004019)		 GI:6323057 P05748
Saccharomyces cerevisiae (Sce) RPL15B
(S000004728)		 GI:6323769 P54780
Kluyveromyces lactis (Kla) KLLA0F17633g GI:50311691
Eremothecium gossypii (Ego) AGOS_AFR214C GI:45198732
Magnaporthe grisea (Mgr) MGG_11785 GI:145605633
Neurospora crassa (Ncr) NCU01776.1 GI:32415471
Arabidopsis thaliana (Ath) AT4G16720 GI:15235851
Arabidopsis thaliana (Ath) AT4G17390 GI:15236049
Oryza sativa (Osa) Os03g0598800 GI:115454023
Plasmodium falciparum (Pfa) PFD0745c GI:124505451


GO terms for Homologene results:

GO ID GO term GO aspect Evidence codes and associations
GO:0005634 nucleus C
IDA
SpoSPCC576.11
SPAC1783.08c
GO:0005730 nucleolus C
IDA
AthAt4g17390
SpoSPAC1783.08c
SPCC576.11
GO:0005829 cytosol C
EXP
HsaRPL15
GO:0005840 ribosome C
ISS
AthAt4g17390
At4g16720
GO:0005886 plasma membrane C
IDA
AthAt4g16720
GO:0016020 membrane C
IDA
AthAt4g17390
GO:0022625 cytosolic large ribosomal subunit C
IDA
AthAt4g17390
At4g16720
SceS000004728
S000004019
ISS
SpoSPAC1783.08c
SPCC576.11
GO:0022626 cytosolic ribosome C
IDA
AthAt4g16720
GO:0030126 COPI vesicle coat C
ISS
PfaPFD0745c
GO:0003723 RNA binding F
IDA
SceS000004019
S000004728
TAS
HsaRPL15
GO:0003735 structural constituent of ribosome F
IDA
SceS000004019
S000004728
ISS
AthAt4g17390
At4g16720
SpoSPAC1783.08c
SPCC576.11
GO:0000003 reproduction P
IMP
CelWBGene00004427
GO:0002119 nematode larval development P
IMP
CelWBGene00004427
GO:0006412 translation P
IDA
SceS000004728
S000004019
ISS
AthAt4g17390
At4g16720
SpoSPCC576.11
SPAC1783.08c
TAS
HsaRPL15
GO:0006414 translational elongation P
EXP
HsaRPL15
GO:0009792 embryo development ending in birth or egg
hatching		 P
IMP
CelWBGene00004427
GO:0018996 molting cycle, collagen and cuticulin-based
cuticle		 P
IMP
CelWBGene00004427
GO:0040007 growth P
IMP
CelWBGene00004427
GO:0040010 positive regulation of growth rate P
IMP
CelWBGene00004427
GO:0040018 positive regulation of multicellular organism
growth		 P
IMP
CelWBGene00004427

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OrthoMCL results:

Selected databases only

OrthoMCL cluster Phylogenetic pattern
OG1_805

Species OrthoMCL
sequence		 Model organism
protein page		 UniProt link
Anopheles gambiae (Aga) aga275 ENSANGP00000021358
Anopheles gambiae (Aga) aga276 ENSANGP00000026442
Ashbya gossypii (Ago) ago3406 AFR214C
Arabidopsis thaliana (Ath) ath19522 At4g16720.1
Arabidopsis thaliana (Ath) ath19597 At4g17390.1
Caenorhabditis elegans (Cel) cel12646 K11H12.2
(CE12148;
WBGene00004427)
Candida glabrata (Cgl) cgl142 CAGL0A03388g
Cryptococcus neoformans (Cne) cne5727 179.m00595
Dictyostelium discoideum (Ddi) ddi3752 DDB0217404
Dictyostelium discoideum (Ddi) ddi11917 DDB0229953
Debaryomyces hansenii (Dha) dha5110 DEHA0F16258g
Drosophila melanogaster (Dme) dme15757 CG17420-PA
Drosophila melanogaster (Dme) dme15756 CG17420-PB
Danio rerio (Dre) dre14498 ENSDARP00000037569
(zgc:92114)		 Q6DHS3
Encephalitozoon cuniculi (Ecu) ecu1026 19074938
Takifugu rubripes (Fru) fru611 SINFRUP00000128118
Gallus gallus (Gga) gga9965 ENSGALP00000018397
(RPL15)		 P51417
Homo sapiens (Hsa) hsa22171 ENSP00000309334
(RPL15)		 P61313
Homo sapiens (Hsa) hsa22170 ENSP00000346867
(RPL15)		 P61313
Homo sapiens (Hsa) hsa26452 ENSP00000352402
Kluyveromyces lactis (Kla) kla4872 KLLA0F17633g
Mus musculus (Mmu) mmu27208 ENSMUSP00000072597
Mus musculus (Mmu) mmu7696 ENSMUSP00000078388
(MGI:1913730)		 Q9CZM2
Neurospora crassa (Ncr) ncr1728 NCU01776.2
Oryza sativa (Osa) osa26100 4003.m00137
Oryza sativa (Osa) osa56191 6185.m00130
Oryza sativa (Osa) osa62531 6505.m00179
Oryza sativa (Osa) osa62762 6681.m00194
Plasmodium falciparum (Pfa) pfa3277 PFD0770c
Rattus norvegicus (Rno) rno11047 ENSRNOP00000010759
(RGD:621181)		 P61314
Saccharomyces cerevisiae (Sce) sce4109 YLR029C
(S000004019)
Saccharomyces cerevisiae (Sce) sce4877 YMR121C
(S000004728)
Schizosaccharomyces pombe (Spo) spo135 SPAC1783.08c Q9US22
Schizosaccharomyces pombe (Spo) spo821 SPCC576.11 O74895
Yarrowia lipolytica (Yli) yli3726 YALI0D24387g


GO terms for OrthoMCL results:

GO ID GO term GO aspect Evidence codes and associations
GO:0005575 cellular_component C
ND
MmuMGI:1913730
GO:0005634 nucleus C
IDA
SpoSPCC576.11
SPAC1783.08c
GO:0005730 nucleolus C
IDA
AthAt4g17390
SpoSPAC1783.08c
SPCC576.11
GO:0005840 ribosome C
ISS
AthAt4g17390
At4g16720
GO:0005886 plasma membrane C
IDA
AthAt4g16720
GO:0016020 membrane C
IDA
AthAt4g17390
GO:0022625 cytosolic large ribosomal subunit C
IDA
AthAt4g17390
At4g16720
SceS000004728
S000004019
ISS
SpoSPAC1783.08c
SPCC576.11
GO:0022626 cytosolic ribosome C
IDA
AthAt4g16720
GO:0003674 molecular_function F
ND
MmuMGI:1913730
GO:0003723 RNA binding F
IDA
SceS000004019
S000004728
GO:0003735 structural constituent of ribosome F
IDA
SceS000004019
S000004728
ISS
AthAt4g17390
At4g16720
SpoSPAC1783.08c
SPCC576.11
GO:0000003 reproduction P
IMP
CelWBGene00004427
GO:0002119 nematode larval development P
IMP
CelWBGene00004427
GO:0006412 translation P
IDA
SceS000004728
S000004019
ISS
AthAt4g17390
At4g16720
SpoSPCC576.11
SPAC1783.08c
GO:0008150 biological_process P
ND
MmuMGI:1913730
GO:0009792 embryo development ending in birth or egg
hatching		 P
IMP
CelWBGene00004427
GO:0018996 molting cycle, collagen and cuticulin-based
cuticle		 P
IMP
CelWBGene00004427
GO:0040007 growth P
IMP
CelWBGene00004427
GO:0040010 positive regulation of growth rate P
IMP
CelWBGene00004427
GO:0040018 positive regulation of multicellular organism
growth		 P
IMP
CelWBGene00004427

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Curated yeast ortholog results:

S. pombe
systematic ID		 S. cerevisiae
systematic ID
SPAC1783.08c
(Q9US22)		 YMR121C
(S000004728)
SPCC576.11
(O74895)		 YMR121C
(S000004728)


GO terms for curated homolog results:

GO ID GO term GO aspect Evidence codes and associations
GO:0005634 nucleus C
IDA
SpoSPCC576.11
SPAC1783.08c
GO:0005730 nucleolus C
IDA
SpoSPAC1783.08c
SPCC576.11
GO:0022625 cytosolic large ribosomal subunit C
IDA
SceS000004728
ISS
SpoSPAC1783.08c
SPCC576.11
GO:0003723 RNA binding F
IDA
SceS000004728
GO:0003735 structural constituent of ribosome F
IDA
SceS000004728
ISS
SpoSPAC1783.08c
SPCC576.11
GO:0006412 translation P
IDA
SceS000004728
ISS
SpoSPCC576.11
SPAC1783.08c

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Search for gene by ID or name:

Query species:

Include wild-cards:   

Search for GO info:  

GO info in one table:

s.khadayate@ucl.ac.uk