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Search term: YMR137C

Gene summary:

Species Saccharomyces cerevisiae (Sce)
Primary name PSO2
SGD link S000004745
Alternative ID YMR137C
Description Required for a post-incision step in the repair of DNA single and double-strand breaks that result from interstrand crosslinks produced by a variety of mono- and bi-functional psoralen derivatives; induced by UV-irradiation
Synonyms YMR137C
Datasets
KOGs
Inparanoid
HomoloGene
OrthoMCL
Curated

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KOG results:

KOG name Phylogenetic pattern
(and link to KOGs with this pattern)
KOG1361 ACDHYP-

KOGs classification KOGs description
INFORMATION STORAGE AND PROCESSING Predicted hydrolase involved in interstrand cross-link repair

Species KOG link NCBI link UniProt link
Arabidopsis thaliana (Ath) At1g19020 GI:15221924
Arabidopsis thaliana (Ath) At1g27410 GI:15223519
Arabidopsis thaliana (Ath) At1g66730_1 GI:15219728
Arabidopsis thaliana (Ath) At2g45700_2 GI:15225548
Arabidopsis thaliana (Ath) At3g26680 GI:15231597
Arabidopsis thaliana (Ath) At3g48180 GI:15228356
Caenorhabditis elegans (Cel) CE10128_2 GI:17507267
Drosophila melanogaster (Dme) 7296732 GI:7296732
Homo sapiens (Hsa) Hs15298761 GI:15298761
Homo sapiens (Hsa) Hs11968041 GI:11968041
Homo sapiens (Hsa) Hs12383082
(DCLRE1B)		 GI:12383082 Q9H816
Saccharomyces cerevisiae (Sce) YMR137c
(S000004745)		 GI:6323786 P30620
Schizosaccharomyces pombe (Spo) SPAC22A12.01c GI:19114143 Q10264


GO terms for KOG results:

GO ID GO term GO aspect Evidence codes and associations
GO:0000781 chromosome, telomeric region C
IDA
HsaDCLRE1B
GO:0005575 cellular_component C
ND
AthAt2g45700
At1g19020
At3g26680
At3g48180
At1g27410
GO:0005634 nucleus C
IC
SceS000004745
IDA
SpoSPAC22A12.01c
ISS
SpoSPAC22A12.01c
GO:0005813 centrosome C
IDA
HsaDCLRE1B
GO:0003674 molecular_function F
ND
AthAt2g45700
At1g27410
At1g19020
At3g48180
At3g26680
GO:0003684 damaged DNA binding F
IMP
SceS000004745
ISS
SpoSPAC22A12.01c
GO:0003910 DNA ligase (ATP) activity F
ISS
AthAt1g66730
GO:0005515 protein binding F
IPI
HsaDCLRE1B
GO:0005524 ATP binding F
ISS
AthAt1g66730
GO:0008409 5'-3' exonuclease activity F
IDA
HsaDCLRE1B
SceS000004745
IMP
SceS000004745
ISS
SpoSPAC22A12.01c
GO:0000075 cell cycle checkpoint P
IMP
HsaDCLRE1B
GO:0000723 telomere maintenance P
IMP
HsaDCLRE1B
GO:0006260 DNA replication P
ISS
AthAt1g66730
GO:0006281 DNA repair P
IMP
AthAt3g26680
At1g66730
SceS000004745
SpoSPAC22A12.01c
ISS
AthAt1g66730
GO:0006302 double-strand break repair P
TAS
SceS000004745
GO:0006310 DNA recombination P
ISS
AthAt1g66730
GO:0006914 autophagy P
RCA
SceS000004745
GO:0006950 response to stress P
IEP
AthAt3g26680
GO:0006979 response to oxidative stress P
IMP
AthAt1g19020
GO:0008150 biological_process P
ND
AthAt1g27410
At2g45700
At3g48180
GO:0009845 seed germination P
IMP
AthAt1g66730
GO:0031627 telomeric loop formation P
ISS
HsaDCLRE1B
GO:0031848 protection from non-homologous end joining at
telomere		 P
IMP
HsaDCLRE1B
GO:0031860 telomeric 3' overhang formation P
ISS
HsaDCLRE1B

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HomoloGene results:

HomoloGene cluster Phylogenetic pattern
117890

Species Gene ID NCBI link UniProt link
Schizosaccharomyces pombe (Spo) pso2
(SPAC22A12.01c)		 GI:63054513 Q10264
Saccharomyces cerevisiae (Sce) PSO2
(S000004745)		 GI:6323786 P30620
Kluyveromyces lactis (Kla) KLLA0F17094g GI:50311643
Eremothecium gossypii (Ego) AGOS_ADR250C GI:45188123


GO terms for Homologene results:

GO ID GO term GO aspect Evidence codes and associations
GO:0005634 nucleus C
IC
SceS000004745
IDA
SpoSPAC22A12.01c
ISS
SpoSPAC22A12.01c
GO:0003684 damaged DNA binding F
IMP
SceS000004745
ISS
SpoSPAC22A12.01c
GO:0008409 5'-3' exonuclease activity F
IDA
SceS000004745
IMP
SceS000004745
ISS
SpoSPAC22A12.01c
GO:0006281 DNA repair P
IMP
SceS000004745
SpoSPAC22A12.01c
GO:0006302 double-strand break repair P
TAS
SceS000004745
GO:0006914 autophagy P
RCA
SceS000004745

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OrthoMCL results:

Selected databases only

OrthoMCL cluster Phylogenetic pattern
OG1_2504

Species OrthoMCL
sequence		 Model organism
protein page		 UniProt link
Anopheles gambiae (Aga) aga7414 ENSANGP00000016032
Ashbya gossypii (Ago) ago1991 ADR250C
Arabidopsis thaliana (Ath) ath11794 At2g45700.1
Arabidopsis thaliana (Ath) ath15011 At3g26680.1
Arabidopsis thaliana (Ath) ath15012 At3g26680.2
Candida glabrata (Cgl) cgl2563 CAGL0I00880g
Cryptococcus neoformans (Cne) cne4488 177.m03246
Dictyostelium discoideum (Ddi) ddi6970 DDB0169391
Debaryomyces hansenii (Dha) dha1530 DEHA0C02178g
Drosophila melanogaster (Dme) dme11035 CG10018-PA
(FBgn0037338)
Danio rerio (Dre) dre3677 ENSDARP00000030830
Takifugu rubripes (Fru) fru19309 SINFRUP00000128225
Gallus gallus (Gga) gga20875 ENSGALP00000014508
Homo sapiens (Hsa) hsa4628 ENSP00000354572
Homo sapiens (Hsa) hsa4627 ENSP00000355185
(DCLRE1A)		 Q6PJP8
Kluyveromyces lactis (Kla) kla4848 KLLA0F17094g
Mus musculus (Mmu) mmu13943 ENSMUSP00000026063
(MGI:1930042)		 Q9JIC3
Neurospora crassa (Ncr) ncr7185 NCU07381.2
Oryza sativa (Osa) osa40132 5009.m00063
Oryza sativa (Osa) osa48831 5677.m00228
Oryza sativa (Osa) osa83600 8250.m00084
Plasmodium falciparum (Pfa) pfa1574 PF14_0711
Rattus norvegicus (Rno) rno4301 ENSRNOP00000034952
(RGD:1306156)
Saccharomyces cerevisiae (Sce) sce4895 YMR137C
(S000004745)
Schizosaccharomyces pombe (Spo) spo3017 SPAC22A12.01c Q10264
Yarrowia lipolytica (Yli) yli3215 YALI0D12166g


GO terms for OrthoMCL results:

GO ID GO term GO aspect Evidence codes and associations
GO:0005575 cellular_component C
ND
AthAt2g45700
At3g26680
PfaPF14_0711
GO:0005634 nucleus C
IC
SceS000004745
IDA
SpoSPAC22A12.01c
ISA
MmuMGI:1930042
ISS
SpoSPAC22A12.01c
GO:0003674 molecular_function F
ND
AthAt2g45700
At3g26680
PfaPF14_0711
GO:0003684 damaged DNA binding F
IMP
SceS000004745
ISS
SpoSPAC22A12.01c
GO:0008409 5'-3' exonuclease activity F
IDA
SceS000004745
IMP
SceS000004745
ISS
SpoSPAC22A12.01c
GO:0006281 DNA repair P
IMP
AthAt3g26680
SceS000004745
SpoSPAC22A12.01c
ISS
DmeFBgn0037338
GO:0006289 nucleotide-excision repair P
IMP
MmuMGI:1930042
GO:0006302 double-strand break repair P
TAS
SceS000004745
GO:0006914 autophagy P
RCA
SceS000004745
GO:0006950 response to stress P
IEP
AthAt3g26680
GO:0008150 biological_process P
ND
AthAt2g45700
PfaPF14_0711

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Curated yeast ortholog results:

S. pombe
systematic ID		 S. cerevisiae
systematic ID
SPAC22A12.01c
(Q10264)		 YMR137C
(S000004745)


GO terms for curated homolog results:

GO ID GO term GO aspect Evidence codes and associations
GO:0005634 nucleus C
IC
SceS000004745
IDA
SpoSPAC22A12.01c
ISS
SpoSPAC22A12.01c
GO:0003684 damaged DNA binding F
IMP
SceS000004745
ISS
SpoSPAC22A12.01c
GO:0008409 5'-3' exonuclease activity F
IDA
SceS000004745
IMP
SceS000004745
ISS
SpoSPAC22A12.01c
GO:0006281 DNA repair P
IMP
SceS000004745
SpoSPAC22A12.01c
GO:0006302 double-strand break repair P
TAS
SceS000004745
GO:0006914 autophagy P
RCA
SceS000004745

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