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Search term: YMR153W


Gene summary:

Species Saccharomyces cerevisiae (Sce)
Primary name NUP53
SGD link S000004762
Alternative ID YMR153W
Description Subunit of the nuclear pore complex (NPC), interacts with karyopherin Kap121p or with Nup170p via overlapping regions of Nup53p, involved in activation of the spindle checkpoint mediated by the Mad1p-Mad2p complex
Synonyms YMR153W
Datasets
KOGs
Inparanoid
HomoloGene
OrthoMCL
Curated

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OrthoMCL results:

Selected databases only

OrthoMCL cluster Phylogenetic pattern
OG1_13268

Species OrthoMCL
sequence
Model organism
protein page
UniProt link
Ashbya gossypii (Ago) ago2013 ADR272W
Candida glabrata (Cgl) cgl4388 CAGL0L07062g
Candida glabrata (Cgl) cgl5079 CAGL0M09691g
Debaryomyces hansenii (Dha) dha6509 DEHA0G18117g
Kluyveromyces lactis (Kla) kla4408 KLLA0F07227g
Saccharomyces cerevisiae (Sce) sce860 YDL088C
(S000002246)
Saccharomyces cerevisiae (Sce) sce4913 YMR153W
(S000004762)
Schizosaccharomyces pombe (Spo) spo4310 SPAC19E9.01c O13838
Yarrowia lipolytica (Yli) yli3081 YALI0D08954g


GO terms for OrthoMCL results:

GO ID GO term GO aspect Evidence codes and associations
GO:0005635 nuclear envelope C
IDA
SpoSPAC19E9.01c
GO:0005643 nuclear pore C
IDA
SceS000004762
S000002246
TAS
SpoSPAC19E9.01c
GO:0031015 karyopherin docking complex C
IDA
SceS000002246
S000004762
GO:0031965 nuclear membrane C
IDA
SpoSPAC19E9.01c
GO:0005198 structural molecule activity F
TAS
SceS000004762
S000002246
GO:0005515 protein binding F
IPI
SpoSPAC19E9.01c
GO:0000059 protein import into nucleus, docking P
IPI
SceS000004762
S000002246
GO:0006406 mRNA export from nucleus P
IMP
SceS000002246
TAS
SceS000004762
GO:0006407 rRNA export from nucleus P
ISS
SpoSPAC19E9.01c
TAS
SceS000004762
S000002246
GO:0006408 snRNA export from nucleus P
TAS
SceS000004762
S000002246
GO:0006409 tRNA export from nucleus P
RCA
SceS000002246
TAS
SceS000004762
GO:0006607 NLS-bearing substrate import into
nucleus
P
TAS
SceS000004762
S000002246
GO:0006608 snRNP protein import into nucleus P
TAS
SceS000004762
S000002246
GO:0006609 mRNA-binding (hnRNP) protein import into
nucleus
P
TAS
SceS000004762
S000002246
GO:0006610 ribosomal protein import into nucleus P
TAS
SceS000004762
S000002246
GO:0006611 protein export from nucleus P
TAS
SceS000004762
S000002246
GO:0006913 nucleocytoplasmic transport P
TAS
SpoSPAC19E9.01c
GO:0006999 nuclear pore organization P
IGI
SceS000002246
S000004762
GO:0007094 mitotic cell cycle spindle assembly
checkpoint
P
IMP
SpoSPAC19E9.01c
GO:0045184 establishment of protein localization P
RCA
SceS000002246
S000004762
GO:0051031 tRNA transport P
RCA
SceS000002246

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Curated yeast ortholog results:

S. pombe
systematic ID
S. cerevisiae
systematic ID
SPAC19E9.01c
(O13838)
YMR153W
(S000004762)


GO terms for curated homolog results:

GO ID GO term GO aspect Evidence codes and associations
GO:0005635 nuclear envelope C
IDA
SpoSPAC19E9.01c
GO:0005643 nuclear pore C
IDA
SceS000004762
TAS
SpoSPAC19E9.01c
GO:0031015 karyopherin docking complex C
IDA
SceS000004762
GO:0031965 nuclear membrane C
IDA
SpoSPAC19E9.01c
GO:0005198 structural molecule activity F
TAS
SceS000004762
GO:0005515 protein binding F
IPI
SpoSPAC19E9.01c
GO:0000059 protein import into nucleus, docking P
IPI
SceS000004762
GO:0006406 mRNA export from nucleus P
TAS
SceS000004762
GO:0006407 rRNA export from nucleus P
ISS
SpoSPAC19E9.01c
TAS
SceS000004762
GO:0006408 snRNA export from nucleus P
TAS
SceS000004762
GO:0006409 tRNA export from nucleus P
TAS
SceS000004762
GO:0006607 NLS-bearing substrate import into
nucleus
P
TAS
SceS000004762
GO:0006608 snRNP protein import into nucleus P
TAS
SceS000004762
GO:0006609 mRNA-binding (hnRNP) protein import into
nucleus
P
TAS
SceS000004762
GO:0006610 ribosomal protein import into nucleus P
TAS
SceS000004762
GO:0006611 protein export from nucleus P
TAS
SceS000004762
GO:0006913 nucleocytoplasmic transport P
TAS
SpoSPAC19E9.01c
GO:0006999 nuclear pore organization P
IGI
SceS000004762
GO:0007094 mitotic cell cycle spindle assembly
checkpoint
P
IMP
SpoSPAC19E9.01c
GO:0045184 establishment of protein localization P
RCA
SceS000004762

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GO info in one table:

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