YOGY Home YOGY Help

Search term: YMR173W

Gene summary:

Species Saccharomyces cerevisiae (Sce)
Primary name DDR48
SGD link S000004784
Alternative ID YMR173W
Description DNA damage-responsive protein, expression is increased in response to heat-shock stress or treatments that produce DNA lesions; contains multiple repeats of the amino acid sequence NNNDSYGS
Synonyms YMR173W
Datasets
KOGs
Inparanoid
HomoloGene
OrthoMCL
Curated

Search for gene by ID or name:

Query species:

Include wild-cards:   

Search for GO info:  

GO info in one table:

HomoloGene results:

HomoloGene cluster Phylogenetic pattern
56286

Species Gene ID NCBI link UniProt link
Homo sapiens (Hsa) DSPP GI:89001107
Canis familiaris (Cfa) DSPP GI:74002211
Mus musculus (Mmu) Dspp
(MGI:109172)		 GI:111120322 A1L2Z1
Rattus norvegicus (Rno) Dspp
(RGD:2525)		 GI:19923672 41138
Drosophila melanogaster (Dme) CG6004
(FBgn0036203)		 GI:85726472
Saccharomyces cerevisiae (Sce) DDR48
(S000004784)		 GI:6323826
Eremothecium gossypii (Ego) AGOS_AFL125W GI:45198396


GO terms for Homologene results:

GO ID GO term GO aspect Evidence codes and associations
GO:0005737 cytoplasm C
IDA
SceS000004784
GO:0031012 extracellular matrix C
ISO
MmuMGI:109172
GO:0003924 GTPase activity F
IDA
SceS000004784
GO:0005201 extracellular matrix structural
constituent		 F
TAS
HsaDSPP
GO:0005509 calcium ion binding F
TAS
HsaDSPP
GO:0005518 collagen binding F
TAS
HsaDSPP
GO:0016490 structural constituent of peritrophic
membrane		 F
ISS
DmeFBgn0036203
GO:0016887 ATPase activity F
IDA
SceS000004784
GO:0001501 skeletal system development P
TAS
HsaDSPP
GO:0001503 ossification P
TAS
HsaDSPP
GO:0006281 DNA repair P
IDA
SceS000004784
IMP
SceS000004784
GO:0007039 vacuolar protein catabolic process P
RCA
SceS000004784
GO:0007275 multicellular organismal development P
TAS
HsaDSPP
GO:0071460 cellular response to cell-matrix
adhesion		 P
IDA
MmuMGI:109172

Back to the top

OrthoMCL results:

Selected databases only

OrthoMCL cluster Phylogenetic pattern
OG1_8567

Species OrthoMCL
sequence		 Model organism
protein page		 UniProt link
Ashbya gossypii (Ago) ago3070 AFL125W
Caenorhabditis elegans (Cel) cel5949 F10F2.9
(CE00954;
WBGene00004118)
Drosophila melanogaster (Dme) dme2168 CG5787-PA
(FBgn0032454)
Kluyveromyces lactis (Kla) kla1174 KLLA0B14498g
Neurospora crassa (Ncr) ncr4484 NCU04616.2
Plasmodium falciparum (Pfa) pfa824 PF11_0373
Saccharomyces cerevisiae (Sce) sce4936 YMR173W
(S000004784)
Yarrowia lipolytica (Yli) yli2427 YALI0C17567g


GO terms for OrthoMCL results:

GO ID GO term GO aspect Evidence codes and associations
GO:0005737 cytoplasm C
IDA
SceS000004784
GO:0005875 microtubule associated complex C
IDA
DmeFBgn0032454
GO:0003924 GTPase activity F
IDA
SceS000004784
GO:0016887 ATPase activity F
IDA
SceS000004784
GO:0006281 DNA repair P
IDA
SceS000004784
IMP
SceS000004784
GO:0007039 vacuolar protein catabolic process P
RCA
SceS000004784
GO:0040010 positive regulation of growth rate P
IMP
CelWBGene00004118

Back to the top
YOGY Home YOGY Help

Search for gene by ID or name:

Query species:

Include wild-cards:   

Search for GO info:  

GO info in one table:

s.khadayate@ucl.ac.uk