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Search term: YMR188C

Gene summary:

Species Saccharomyces cerevisiae (Sce)
Primary name MRPS17
SGD link S000004800
Alternative ID YMR188C
Description Mitochondrial ribosomal protein of the small subunit
Synonyms YMR188C
Datasets
KOGs
Inparanoid
HomoloGene
OrthoMCL
Curated

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GO info in one table:

KOG results:

KOG name Phylogenetic pattern
(and link to KOGs with this pattern)
KOG1740 A---YP-

KOGs classification KOGs description
INFORMATION STORAGE AND PROCESSING Predicted mitochondrial/chloroplast ribosomal protein S17

Species KOG link NCBI link UniProt link
Arabidopsis thaliana (Ath) At1g49400 GI:15222132
Arabidopsis thaliana (Ath) At1g79850 GI:15220003
Arabidopsis thaliana (Ath) At3g18880 GI:15230221
Saccharomyces cerevisiae (Sce) YMR188c
(S000004800)		 GI:6323842 Q03246
Schizosaccharomyces pombe (Spo) SPBC409.14c GI:19112256 Q9UUB0


GO terms for KOG results:

GO ID GO term GO aspect Evidence codes and associations
GO:0000312 plastid small ribosomal subunit C
ISS
AthAt1g79850
GO:0005739 mitochondrion C
IDA
SceS000004800
SpoSPBC409.14c
GO:0005763 mitochondrial small ribosomal subunit C
IPI
SceS000004800
ISS
SpoSPBC409.14c
GO:0009507 chloroplast C
IDA
AthAt1g79850
GO:0009570 chloroplast stroma C
IDA
AthAt1g79850
GO:0009941 chloroplast envelope C
IDA
AthAt1g79850
GO:0022627 cytosolic small ribosomal subunit C
ISS
AthAt3g18880
At1g79850
At1g49400
GO:0003735 structural constituent of ribosome F
IPI
SceS000004800
ISS
AthAt3g18880
At1g79850
At1g49400
SpoSPBC409.14c
GO:0006412 translation P
ISS
AthAt3g18880
At1g49400
At1g79850
SpoSPBC409.14c
TAS
AthAt1g79850
GO:0009060 aerobic respiration P
IEP
SceS000004800
GO:0009793 embryo development ending in seed
dormancy		 P
NAS
AthAt1g49400
GO:0032543 mitochondrial translation P
IC
SceS000004800
NAS
SpoSPBC409.14c
RCA
SceS000004800

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HomoloGene results:

HomoloGene cluster Phylogenetic pattern
39960

Species Gene ID NCBI link UniProt link
Saccharomyces cerevisiae (Sce) MRPS17
(S000004800)		 GI:6323842 Q03246
Kluyveromyces lactis (Kla) KLLA0D12782g GI:50307307
Eremothecium gossypii (Ego) AGOS_AFL156W GI:45198365


GO terms for Homologene results:

GO ID GO term GO aspect Evidence codes and associations
GO:0005739 mitochondrion C
IDA
SceS000004800
GO:0005763 mitochondrial small ribosomal subunit C
IPI
SceS000004800
GO:0003735 structural constituent of ribosome F
IPI
SceS000004800
GO:0009060 aerobic respiration P
IEP
SceS000004800
GO:0032543 mitochondrial translation P
IC
SceS000004800
RCA
SceS000004800

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OrthoMCL results:

Selected databases only

OrthoMCL cluster Phylogenetic pattern
OG1_976

Species OrthoMCL
sequence		 Model organism
protein page		 UniProt link
Anopheles gambiae (Aga) aga495 ENSANGP00000009917
Ashbya gossypii (Ago) ago3039 AFL156W
Arabidopsis thaliana (Ath) ath4211 At1g49400.1
Arabidopsis thaliana (Ath) ath7359 At1g79850.1
Arabidopsis thaliana (Ath) ath14162 At3g18880.1
Caenorhabditis elegans (Cel) cel1134 C05D11.10
(CE01129;
WBGene00015487)
Candida glabrata (Cgl) cgl4097 CAGL0L00451g
Cryptococcus neoformans (Cne) cne5534 179.m00387
Dictyostelium discoideum (Ddi) ddi3363 DDB0169107
Debaryomyces hansenii (Dha) dha4666 DEHA0F06270g
Drosophila melanogaster (Dme) dme6970 CG4326-PA
(FBgn0034986)
Danio rerio (Dre) dre13901 ENSDARP00000011525
Escherichia coli (Eco) eco3193 16131190
Takifugu rubripes (Fru) fru584 SINFRUP00000148520
Gallus gallus (Gga) gga8810 ENSGALP00000003739
Gallus gallus (Gga) gga8809 ENSGALP00000003740
(MRPS17)
Homo sapiens (Hsa) hsa28632 ENSP00000285298
(MRPS17)		 Q9Y2R5
Kluyveromyces lactis (Kla) kla2631 KLLA0D12782g
Mus musculus (Mmu) mmu20998 ENSMUSP00000040281
(MGI:1913508)		 Q9CQE3
Neurospora crassa (Ncr) ncr2350 NCU02419.2
Oryza sativa (Osa) osa26435 3928.m00103
Oryza sativa (Osa) osa44880 5624.m00160
Oryza sativa (Osa) osa71751 7040.m00099
Plasmodium falciparum (Pfa) pfa4096 MAL13P1.327
Rattus norvegicus (Rno) rno8463 ENSRNOP00000001229
(RGD:1307650)
Saccharomyces cerevisiae (Sce) sce4954 YMR188C
(S000004800)
Schizosaccharomyces pombe (Spo) spo2023 SPBC409.14c Q9UUB0
Yarrowia lipolytica (Yli) yli2038 YALI0C07887g


GO terms for OrthoMCL results:

GO ID GO term GO aspect Evidence codes and associations
GO:0000312 plastid small ribosomal subunit C
ISS
AthAt1g79850
GO:0000314 organellar small ribosomal subunit C
ISS
PfaMAL13P1.327
GO:0005739 mitochondrion C
IDA
MmuMGI:1913508
SceS000004800
SpoSPBC409.14c
GO:0005763 mitochondrial small ribosomal subunit C
IPI
SceS000004800
ISS
DmeFBgn0034986
SpoSPBC409.14c
GO:0009507 chloroplast C
IDA
AthAt1g79850
GO:0009570 chloroplast stroma C
IDA
AthAt1g79850
GO:0009941 chloroplast envelope C
IDA
AthAt1g79850
GO:0022627 cytosolic small ribosomal subunit C
ISS
AthAt3g18880
At1g79850
At1g49400
GO:0003674 molecular_function F
ND
MmuMGI:1913508
GO:0003735 structural constituent of ribosome F
IPI
SceS000004800
ISS
AthAt3g18880
At1g79850
At1g49400
DmeFBgn0034986
SpoSPBC409.14c
GO:0000003 reproduction P
IMP
CelWBGene00015487
GO:0002119 nematode larval development P
IMP
CelWBGene00015487
GO:0006412 translation P
ISS
AthAt3g18880
At1g49400
At1g79850
DmeFBgn0034986
SpoSPBC409.14c
TAS
AthAt1g79850
GO:0008150 biological_process P
ND
MmuMGI:1913508
GO:0009060 aerobic respiration P
IEP
SceS000004800
GO:0009792 embryo development ending in birth or egg
hatching		 P
IMP
CelWBGene00015487
GO:0009793 embryo development ending in seed
dormancy		 P
NAS
AthAt1g49400
GO:0032543 mitochondrial translation P
IC
SceS000004800
NAS
SpoSPBC409.14c
RCA
SceS000004800
GO:0040007 growth P
IMP
CelWBGene00015487
GO:0040010 positive regulation of growth rate P
IMP
CelWBGene00015487

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Curated yeast ortholog results:

S. pombe
systematic ID		 S. cerevisiae
systematic ID
SPBC409.14c
(Q9UUB0)		 YMR188C
(S000004800)


GO terms for curated homolog results:

GO ID GO term GO aspect Evidence codes and associations
GO:0005739 mitochondrion C
IDA
SceS000004800
SpoSPBC409.14c
GO:0005763 mitochondrial small ribosomal subunit C
IPI
SceS000004800
ISS
SpoSPBC409.14c
GO:0003735 structural constituent of ribosome F
IPI
SceS000004800
ISS
SpoSPBC409.14c
GO:0006412 translation P
ISS
SpoSPBC409.14c
GO:0009060 aerobic respiration P
IEP
SceS000004800
GO:0032543 mitochondrial translation P
IC
SceS000004800
NAS
SpoSPBC409.14c
RCA
SceS000004800

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