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Search term: YMR201C


Gene summary:

Species Saccharomyces cerevisiae (Sce)
Primary name RAD14
SGD link S000004814
Alternative ID YMR201C
Description Protein that recognizes and binds damaged DNA during nucleotide excision repair; subunit of Nucleotide Excision Repair Factor 1 (NEF1); contains zinc finger motif; homolog of human XPA protein
Synonyms YMR201C
Datasets
KOGs
Inparanoid
HomoloGene
OrthoMCL
Curated

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GO info in one table:


KOG results:

KOG name Phylogenetic pattern
(and link to KOGs with this pattern)
KOG4017 -CDHYPE

KOGs classification KOGs description
INFORMATION STORAGE AND PROCESSING DNA excision repair protein XPA/XPAC/RAD14

Species KOG link NCBI link UniProt link
Caenorhabditis elegans (Cel) CE06130
(WBGene00006963)
GI:17508149 Q21302
Drosophila melanogaster (Dme) 7290463
(FBgn0004832)
GI:17136722
Homo sapiens (Hsa) Hs4507937
(XPA)
GI:4507937 P23025
Saccharomyces cerevisiae (Sce) YMR201c
(S000004814)
GI:6323857 P28519
Schizosaccharomyces pombe (Spo) SPBC649.03 GI:19112014 O59753
Encephalitozoon cuniculi (Ecu) ECU10g1170 GI:19074726 Q8SR26


GO terms for KOG results:

GO ID GO term GO aspect Evidence codes and associations
GO:0000109 nucleotide-excision repair complex C
ISS
SpoSPBC649.03
GO:0000110 nucleotide-excision repair factor 1
complex
C
IPI
SceS000004814
TAS
SceS000004814
GO:0005634 nucleus C
IDA
CelWBGene00006963
DmeFBgn0004832
SceS000004814
NAS
DmeFBgn0004832
GO:0005654 nucleoplasm C
EXP
HsaXPA
GO:0003684 damaged DNA binding F
IDA
SceS000004814
ISS
SpoSPBC649.03
TAS
SceS000004814
GO:0005515 protein binding F
IPI
HsaXPA
GO:0008270 zinc ion binding F
IDA
SceS000004814
GO:0019904 protein domain specific binding F
IPI
HsaXPA
GO:0042803 protein homodimerization activity F
IPI
HsaXPA
GO:0000003 reproduction P
IMP
CelWBGene00006963
GO:0000715 nucleotide-excision repair, DNA damage
recognition
P
IDA
SceS000004814
ISS
SpoSPBC649.03
TAS
SceS000004814
GO:0000718 nucleotide-excision repair, DNA damage
removal
P
EXP
HsaXPA
GO:0006281 DNA repair P
RCA
SceS000004814
TAS
HsaXPA
GO:0006289 nucleotide-excision repair P
IDA
DmeFBgn0004832
IGI
DmeFBgn0004832
SpoSPBC649.03
ISS
DmeFBgn0004832
GO:0006914 autophagy P
RCA
SceS000004814
GO:0006974 response to DNA damage stimulus P
IMP
CelWBGene00006963
RCA
SceS000004814
GO:0008340 determination of adult lifespan P
IMP
CelWBGene00006963
GO:0009411 response to UV P
IGI
CelWBGene00006963
IMP
CelWBGene00006963
GO:0009792 embryo development ending in birth or egg
hatching
P
IMP
CelWBGene00006963
GO:0030163 protein catabolic process P
IMP
CelWBGene00006963
GO:0040025 vulval development P
IMP
CelWBGene00006963

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HomoloGene results:

HomoloGene cluster Phylogenetic pattern
117891

Species Gene ID NCBI link UniProt link
Schizosaccharomyces pombe (Spo) rhp14
(SPBC649.03)
GI:19112014 O59753
Saccharomyces cerevisiae (Sce) RAD14
(S000004814)
GI:6323857 P28519
Kluyveromyces lactis (Kla) KLLA0F06424g GI:50310699
Eremothecium gossypii (Ego) AGOS_AFL177W GI:45198344


GO terms for Homologene results:

GO ID GO term GO aspect Evidence codes and associations
GO:0000109 nucleotide-excision repair complex C
ISS
SpoSPBC649.03
GO:0000110 nucleotide-excision repair factor 1
complex
C
IPI
SceS000004814
TAS
SceS000004814
GO:0005634 nucleus C
IDA
SceS000004814
GO:0003684 damaged DNA binding F
IDA
SceS000004814
ISS
SpoSPBC649.03
TAS
SceS000004814
GO:0008270 zinc ion binding F
IDA
SceS000004814
GO:0000715 nucleotide-excision repair, DNA damage
recognition
P
IDA
SceS000004814
ISS
SpoSPBC649.03
TAS
SceS000004814
GO:0006281 DNA repair P
RCA
SceS000004814
GO:0006289 nucleotide-excision repair P
IGI
SpoSPBC649.03
GO:0006914 autophagy P
RCA
SceS000004814
GO:0006974 response to DNA damage stimulus P
RCA
SceS000004814

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OrthoMCL results:

Selected databases only

OrthoMCL cluster Phylogenetic pattern
OG1_5069

Species OrthoMCL
sequence
Model organism
protein page
UniProt link
Anopheles gambiae (Aga) aga2971 ENSANGP00000011002
Ashbya gossypii (Ago) ago3018 AFL177W
Caenorhabditis elegans (Cel) cel12180 K07G5.2
(CE06130;
WBGene00006963)
Candida glabrata (Cgl) cgl4540 CAGL0L10692g
Cryptococcus neoformans (Cne) cne4230 177.m02988
Debaryomyces hansenii (Dha) dha2802 DEHA0D11374g
Drosophila melanogaster (Dme) dme16438 CG6358-PA
(FBgn0004832)
Encephalitozoon cuniculi (Ecu) ecu642 19074726
Takifugu rubripes (Fru) fru3164 SINFRUP00000135801
Homo sapiens (Hsa) hsa31610 ENSP00000259463
Kluyveromyces lactis (Kla) kla4371 KLLA0F06424g
Mus musculus (Mmu) mmu18092 ENSMUSP00000030013
(MGI:99135)
Q64267-1
Neurospora crassa (Ncr) ncr8521 NCU08742.2
Rattus norvegicus (Rno) rno23087 ENSRNOP00000012779
(RGD:1308769)
Saccharomyces cerevisiae (Sce) sce4970 YMR201C
(S000004814)
Schizosaccharomyces pombe (Spo) spo4418 SPBC649.03 O59753
Yarrowia lipolytica (Yli) yli807 YALI0B01474g


GO terms for OrthoMCL results:

GO ID GO term GO aspect Evidence codes and associations
GO:0000109 nucleotide-excision repair complex C
ISS
SpoSPBC649.03
GO:0000110 nucleotide-excision repair factor 1
complex
C
IPI
SceS000004814
TAS
SceS000004814
GO:0005634 nucleus C
IDA
CelWBGene00006963
DmeFBgn0004832
MmuMGI:99135
SceS000004814
NAS
DmeFBgn0004832
GO:0003684 damaged DNA binding F
IDA
SceS000004814
ISS
SpoSPBC649.03
TAS
SceS000004814
GO:0008270 zinc ion binding F
IDA
SceS000004814
GO:0000003 reproduction P
IMP
CelWBGene00006963
GO:0000715 nucleotide-excision repair, DNA damage
recognition
P
IDA
SceS000004814
ISS
SpoSPBC649.03
TAS
SceS000004814
GO:0006281 DNA repair P
IMP
MmuMGI:99135
RCA
SceS000004814
GO:0006289 nucleotide-excision repair P
IDA
DmeFBgn0004832
IGI
DmeFBgn0004832
SpoSPBC649.03
IMP
MmuMGI:99135
ISS
DmeFBgn0004832
GO:0006914 autophagy P
RCA
SceS000004814
GO:0006974 response to DNA damage stimulus P
IMP
CelWBGene00006963
RCA
SceS000004814
GO:0006979 response to oxidative stress P
IMP
MmuMGI:99135
GO:0008340 determination of adult lifespan P
IMP
CelWBGene00006963
GO:0008630 DNA damage response, signal transduction resulting
in induction of apoptosis
P
IMP
MmuMGI:99135
GO:0009411 response to UV P
IGI
CelWBGene00006963
IMP
CelWBGene00006963
MmuMGI:99135
GO:0009636 response to toxin P
IMP
MmuMGI:99135
GO:0009792 embryo development ending in birth or egg
hatching
P
IMP
CelWBGene00006963
GO:0030163 protein catabolic process P
IMP
CelWBGene00006963
GO:0040025 vulval development P
IMP
CelWBGene00006963

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Curated yeast ortholog results:

S. pombe
systematic ID
S. cerevisiae
systematic ID
SPBC649.03
(O59753)
YMR201C
(S000004814)


GO terms for curated homolog results:

GO ID GO term GO aspect Evidence codes and associations
GO:0000109 nucleotide-excision repair complex C
ISS
SpoSPBC649.03
GO:0000110 nucleotide-excision repair factor 1
complex
C
IPI
SceS000004814
TAS
SceS000004814
GO:0005634 nucleus C
IDA
SceS000004814
GO:0003684 damaged DNA binding F
IDA
SceS000004814
ISS
SpoSPBC649.03
TAS
SceS000004814
GO:0008270 zinc ion binding F
IDA
SceS000004814
GO:0000715 nucleotide-excision repair, DNA damage
recognition
P
IDA
SceS000004814
ISS
SpoSPBC649.03
TAS
SceS000004814
GO:0006281 DNA repair P
RCA
SceS000004814
GO:0006289 nucleotide-excision repair P
IGI
SpoSPBC649.03
GO:0006914 autophagy P
RCA
SceS000004814
GO:0006974 response to DNA damage stimulus P
RCA
SceS000004814

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GO info in one table:

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