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Search term: YMR218C


Gene summary:

Species Saccharomyces cerevisiae (Sce)
Primary name TRS130
SGD link S000004831
Alternative ID YMR218C
Description One of 10 subunits of the transport protein particle (TRAPP) complex of the cis-Golgi which mediates vesicle docking and fusion; involved in ER to Golgi membrane traffic; mutation activates transcription of OCH1
Synonyms YMR218C
Datasets
KOGs
Inparanoid
HomoloGene
OrthoMCL
Curated

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KOG results:

KOG name Phylogenetic pattern
(and link to KOGs with this pattern)
KOG1931 ACDHYP-

KOGs classification KOGs description
POORLY CHARACTERIZED Putative transmembrane protein

Species KOG link NCBI link UniProt link
Arabidopsis thaliana (Ath) At5g54440 GI:15239646
Caenorhabditis elegans (Cel) CE27525 GI:17510537
Drosophila melanogaster (Dme) 7299971 GI:9979376
Homo sapiens (Hsa) Hs19923164 GI:19923164
Saccharomyces cerevisiae (Sce) YMR218c
(S000004831)
GI:6323874 Q03660
Schizosaccharomyces pombe (Spo) SPCC285.14 GI:19075842 O74501


GO terms for KOG results:

GO ID GO term GO aspect Evidence codes and associations
GO:0005575 cellular_component C
ND
AthAt5g54440
GO:0005634 nucleus C
NAS
SpoSPCC285.14
GO:0005829 cytosol C
IDA
SpoSPCC285.14
GO:0030008 TRAPP complex C
IDA
SceS000004831
ISS
SpoSPCC285.14
GO:0003674 molecular_function F
ND
AthAt5g54440
GO:0017112 Rab guanyl-nucleotide exchange factor
activity
F
IGI
SceS000004831
IMP
SceS000004831
ISS
SpoSPCC285.14
GO:0000919 cell plate assembly P
IMP
AthAt5g54440
GO:0006886 intracellular protein transport P
IC
SpoSPCC285.14
GO:0006888 ER to Golgi vesicle-mediated transport P
IMP
SceS000004831
ISS
SpoSPCC285.14
GO:0032313 regulation of Rab GTPase activity P
IC
SpoSPCC285.14
IMP
SceS000004831

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HomoloGene results:

HomoloGene cluster Phylogenetic pattern
39974

Species Gene ID NCBI link UniProt link
Saccharomyces cerevisiae (Sce) TRS130
(S000004831)
GI:6323874 Q03660
Kluyveromyces lactis (Kla) KLLA0C07128g GI:50305115
Eremothecium gossypii (Ego) AGOS_AER352C GI:45190954


GO terms for Homologene results:

GO ID GO term GO aspect Evidence codes and associations
GO:0030008 TRAPP complex C
IDA
SceS000004831
GO:0017112 Rab guanyl-nucleotide exchange factor
activity
F
IGI
SceS000004831
IMP
SceS000004831
GO:0006888 ER to Golgi vesicle-mediated transport P
IMP
SceS000004831
GO:0032313 regulation of Rab GTPase activity P
IMP
SceS000004831

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OrthoMCL results:

Selected databases only

OrthoMCL cluster Phylogenetic pattern
OG1_24693

Species OrthoMCL
sequence
Model organism
protein page
UniProt link
Ashbya gossypii (Ago) ago2853 AER352C
Candida glabrata (Cgl) cgl1400 CAGL0F03949g
Debaryomyces hansenii (Dha) dha3406 DEHA0E03773g
Kluyveromyces lactis (Kla) kla1515 KLLA0C07128g
Saccharomyces cerevisiae (Sce) sce4987 YMR218C
(S000004831)


GO terms for OrthoMCL results:

GO ID GO term GO aspect Evidence codes and associations
GO:0030008 TRAPP complex C
IDA
SceS000004831
GO:0017112 Rab guanyl-nucleotide exchange factor
activity
F
IGI
SceS000004831
IMP
SceS000004831
GO:0006888 ER to Golgi vesicle-mediated transport P
IMP
SceS000004831
GO:0032313 regulation of Rab GTPase activity P
IMP
SceS000004831

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Curated yeast ortholog results:

S. pombe
systematic ID
S. cerevisiae
systematic ID
SPCC285.14
(O74501)
YMR218C
(S000004831)


GO terms for curated homolog results:

GO ID GO term GO aspect Evidence codes and associations
GO:0005634 nucleus C
NAS
SpoSPCC285.14
GO:0005829 cytosol C
IDA
SpoSPCC285.14
GO:0030008 TRAPP complex C
IDA
SceS000004831
ISS
SpoSPCC285.14
GO:0017112 Rab guanyl-nucleotide exchange factor
activity
F
IGI
SceS000004831
IMP
SceS000004831
ISS
SpoSPCC285.14
GO:0006886 intracellular protein transport P
IC
SpoSPCC285.14
GO:0006888 ER to Golgi vesicle-mediated transport P
IMP
SceS000004831
ISS
SpoSPCC285.14
GO:0032313 regulation of Rab GTPase activity P
IC
SpoSPCC285.14
IMP
SceS000004831

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