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Search term: YMR223W


Gene summary:

Species Saccharomyces cerevisiae (Sce)
Primary name UBP8
SGD link S000004836
Alternative ID YMR223W
Description Ubiquitin-specific protease that is a component of the SAGA (Spt-Ada-Gcn5-Acetyltransferase) acetylation complex; required for SAGA-mediated deubiquitination of histone H2B
Synonyms YMR223W
Datasets
KOGs
Inparanoid
HomoloGene
OrthoMCL
Curated

Search for gene by ID or name:

Query species:

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Search for GO info:  

GO info in one table:


KOG results:

KOG name Phylogenetic pattern
(and link to KOGs with this pattern)
KOG1867 ACDHYP-

KOGs classification KOGs description
CELLULAR PROCESSES AND SIGNALING Ubiquitin-specific protease

Species KOG link NCBI link UniProt link
Arabidopsis thaliana (Ath) At5g10790 GI:18416377
Caenorhabditis elegans (Cel) CE15678
(WBGene00007943)
GI:17550824 O17646
Caenorhabditis elegans (Cel) CE26241 GI:17510437
Caenorhabditis elegans (Cel) CE27307_1 GI:17556378
Drosophila melanogaster (Dme) 7290647
(FBgn0029819)
GI:18858101
Drosophila melanogaster (Dme) 7293885
(FBgn0013717)
GI:17647743
Homo sapiens (Hsa) Hs14149817 GI:14149817
Homo sapiens (Hsa) Hs14249222 GI:14249222
Homo sapiens (Hsa) Hs21361749 GI:15559639 Q70CQ1
Homo sapiens (Hsa) Hs22055047 GI:22055047
Homo sapiens (Hsa) Hs22055583 GI:22055583
Homo sapiens (Hsa) Hs22060223 GI:22060223
Homo sapiens (Hsa) Hs22065367 GI:22065367
Homo sapiens (Hsa) Hs5730110 GI:5730110
Saccharomyces cerevisiae (Sce) YDL122w
(S000002280)
GI:6320081 P25037
Saccharomyces cerevisiae (Sce) YMR223w
(S000004836)
GI:6323879 P50102
Schizosaccharomyces pombe (Spo) SPAC13A11.04c GI:19113904 Q09738
Schizosaccharomyces pombe (Spo) SPBC19C2.04c GI:19112481 Q9UUD6


GO terms for KOG results:

GO ID GO term GO aspect Evidence codes and associations
GO:0000124 SAGA complex C
IDA
DmeFBgn0013717
SceS000004836
ISS
SpoSPAC13A11.04c
GO:0005634 nucleus C
IDA
SpoSPBC19C2.04c
SPAC13A11.04c
GO:0005737 cytoplasm C
IC
SceS000002280
IDA
SceS000002280
GO:0005783 endoplasmic reticulum C
IDA
SceS000002280
GO:0005829 cytosol C
IDA
SpoSPBC19C2.04c
GO:0046695 SLIK (SAGA-like) complex C
IDA
SceS000004836
GO:0004221 ubiquitin thiolesterase activity F
ISS
SpoSPAC13A11.04c
GO:0004843 ubiquitin-specific protease activity F
IDA
SceS000002280
IMP
SceS000004836
ISS
AthAt5g10790
DmeFBgn0013717
GO:0005515 protein binding F
IPI
DmeFBgn0013717
GO:0006338 chromatin remodeling P
IC
SpoSPAC13A11.04c
GO:0006366 transcription from RNA polymerase II
promoter
P
IC
SpoSPAC13A11.04c
GO:0006473 protein amino acid acetylation P
RCA
SceS000004836
GO:0006511 ubiquitin-dependent protein catabolic
process
P
IGI
DmeFBgn0013717
GO:0007411 axon guidance P
IMP
DmeFBgn0013717
GO:0007412 axon target recognition P
IMP
DmeFBgn0013717
GO:0008347 glial cell migration P
IMP
DmeFBgn0013717
GO:0016573 histone acetylation P
IC
SpoSPAC13A11.04c
RCA
SceS000004836
GO:0016578 histone deubiquitination P
IMP
DmeFBgn0013717
SceS000004836
ISS
SpoSPAC13A11.04c
GO:0016579 protein deubiquitination P
IMP
DmeFBgn0013717
TAS
SceS000002280
GO:0021782 glial cell development P
IMP
DmeFBgn0013717
GO:0043543 protein amino acid acylation P
RCA
SceS000004836
GO:0045449 regulation of transcription P
IMP
DmeFBgn0013717

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HomoloGene results:

HomoloGene cluster Phylogenetic pattern
52664

Species Gene ID NCBI link UniProt link
Homo sapiens (Hsa) USP22 GI:150010639
Canis familiaris (Cfa) USP22 GI:73956277
Mus musculus (Mmu) Usp22
(MGI:2144157)
GI:110625685 Q3V3H6
Gallus gallus (Gga) USP22 GI:118097855
Drosophila melanogaster (Dme) not
(FBgn0013717)
GI:17647743
Anopheles gambiae (Aga) AgaP_AGAP012119 GI:158300513
Schizosaccharomyces pombe (Spo) ubp8
(SPAC13A11.04c)
GI:19113904 Q09738
Saccharomyces cerevisiae (Sce) UBP8
(S000004836)
GI:6323879 P50102
Kluyveromyces lactis (Kla) KLLA0C06974g GI:50305101
Eremothecium gossypii (Ego) AGOS_AFR551W GI:45199069
Magnaporthe grisea (Mgr) MGG_03527 GI:145616162
Neurospora crassa (Ncr) NCU02375.1 GI:32421415
Oryza sativa (Osa) Os04g0647300 GI:115460940


GO terms for Homologene results:

GO ID GO term GO aspect Evidence codes and associations
GO:0000124 SAGA complex C
IDA
DmeFBgn0013717
HsaUSP22
SceS000004836
ISS
SpoSPAC13A11.04c
GO:0005575 cellular_component C
ND
MmuMGI:2144157
GO:0005634 nucleus C
IDA
SpoSPAC13A11.04c
GO:0046695 SLIK (SAGA-like) complex C
IDA
SceS000004836
GO:0003713 transcription coactivator activity F
IDA
HsaUSP22
GO:0004221 ubiquitin thiolesterase activity F
ISS
SpoSPAC13A11.04c
GO:0004843 ubiquitin-specific protease activity F
IDA
HsaUSP22
MmuMGI:2144157
IMP
HsaUSP22
SceS000004836
ISS
DmeFBgn0013717
GO:0005515 protein binding F
IPI
DmeFBgn0013717
HsaUSP22
GO:0010485 H4 histone acetyltransferase activity F
IDA
HsaUSP22
GO:0030374 ligand-dependent nuclear receptor transcription
coactivator activity
F
IMP
HsaUSP22
GO:0006338 chromatin remodeling P
IC
SpoSPAC13A11.04c
GO:0006366 transcription from RNA polymerase II
promoter
P
IC
SpoSPAC13A11.04c
GO:0006473 protein amino acid acetylation P
RCA
SceS000004836
GO:0006511 ubiquitin-dependent protein catabolic
process
P
IC
MmuMGI:2144157
IGI
DmeFBgn0013717
GO:0007411 axon guidance P
IMP
DmeFBgn0013717
GO:0007412 axon target recognition P
IMP
DmeFBgn0013717
GO:0008347 glial cell migration P
IMP
DmeFBgn0013717
GO:0009790 embryo development P
NAS
HsaUSP22
GO:0016573 histone acetylation P
IC
SpoSPAC13A11.04c
RCA
SceS000004836
GO:0016574 histone ubiquitination P
IDA
HsaUSP22
GO:0016578 histone deubiquitination P
IDA
HsaUSP22
IMP
DmeFBgn0013717
SceS000004836
ISS
SpoSPAC13A11.04c
GO:0016579 protein deubiquitination P
IDA
HsaUSP22
MmuMGI:2144157
IMP
DmeFBgn0013717
GO:0021782 glial cell development P
IMP
DmeFBgn0013717
GO:0043543 protein amino acid acylation P
RCA
SceS000004836
GO:0045449 regulation of transcription P
IMP
DmeFBgn0013717
GO:0045931 positive regulation of mitotic cell
cycle
P
IMP
HsaUSP22
GO:0045941 positive regulation of transcription P
IMP
HsaUSP22

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OrthoMCL results:

Selected databases only

OrthoMCL cluster Phylogenetic pattern
OG1_2805

Species OrthoMCL
sequence
Model organism
protein page
UniProt link
Anopheles gambiae (Aga) aga9311 ENSANGP00000009183
Anopheles gambiae (Aga) aga14538 ENSANGP00000015399
Ashbya gossypii (Ago) ago3743 AFR551W
Arabidopsis thaliana (Ath) ath23285 At5g10790.1
Candida glabrata (Cgl) cgl5141 CAGL0M11198g
Cryptococcus neoformans (Cne) cne1478 180.m00432
Dictyostelium discoideum (Ddi) ddi1246 DDB0216905
Drosophila melanogaster (Dme) dme10100 CG4166-PA
(FBgn0013717)
Takifugu rubripes (Fru) fru8309 SINFRUP00000127436
Takifugu rubripes (Fru) fru8308 SINFRUP00000174708
Gallus gallus (Gga) gga6473 ENSGALP00000007601
Gallus gallus (Gga) gga6474 ENSGALP00000007602
Gallus gallus (Gga) gga6475 ENSGALP00000007603
(USP22)
Homo sapiens (Hsa) hsa13289 ENSP00000261497
(USP22)
Q9UPT9-1
Kluyveromyces lactis (Kla) kla1508 KLLA0C06974g
Mus musculus (Mmu) mmu3860 ENSMUSP00000041263
(MGI:2144157)
Q5DU02
Mus musculus (Mmu) mmu28577 ENSMUSP00000073324
Neurospora crassa (Ncr) ncr2308 NCU02375.2
Oryza sativa (Osa) osa14254 2962.m00110
Oryza sativa (Osa) osa42830 5423.m00131
Oryza sativa (Osa) osa46710 5758.m00093
Rattus norvegicus (Rno) rno31013 ENSRNOP00000003167
Rattus norvegicus (Rno) rno5197 ENSRNOP00000044118
Rattus norvegicus (Rno) rno31011 ENSRNOP00000047796
Rattus norvegicus (Rno) rno31010 ENSRNOP00000051490
Saccharomyces cerevisiae (Sce) sce4992 YMR223W
(S000004836)
Schizosaccharomyces pombe (Spo) spo2191 SPAC13A11.04c Q09738
Yarrowia lipolytica (Yli) yli2106 YALI0C09438g


GO terms for OrthoMCL results:

GO ID GO term GO aspect Evidence codes and associations
GO:0000124 SAGA complex C
IDA
DmeFBgn0013717
SceS000004836
ISS
SpoSPAC13A11.04c
GO:0005575 cellular_component C
ND
MmuMGI:2144157
GO:0005634 nucleus C
IDA
SpoSPAC13A11.04c
GO:0046695 SLIK (SAGA-like) complex C
IDA
SceS000004836
GO:0004221 ubiquitin thiolesterase activity F
ISS
SpoSPAC13A11.04c
GO:0004843 ubiquitin-specific protease activity F
IDA
MmuMGI:2144157
IMP
SceS000004836
ISS
AthAt5g10790
DmeFBgn0013717
GO:0005515 protein binding F
IPI
DmeFBgn0013717
GO:0006338 chromatin remodeling P
IC
SpoSPAC13A11.04c
GO:0006366 transcription from RNA polymerase II
promoter
P
IC
SpoSPAC13A11.04c
GO:0006473 protein amino acid acetylation P
RCA
SceS000004836
GO:0006511 ubiquitin-dependent protein catabolic
process
P
IC
MmuMGI:2144157
IGI
DmeFBgn0013717
GO:0007411 axon guidance P
IMP
DmeFBgn0013717
GO:0007412 axon target recognition P
IMP
DmeFBgn0013717
GO:0008347 glial cell migration P
IMP
DmeFBgn0013717
GO:0016573 histone acetylation P
IC
SpoSPAC13A11.04c
RCA
SceS000004836
GO:0016578 histone deubiquitination P
IMP
DmeFBgn0013717
SceS000004836
ISS
SpoSPAC13A11.04c
GO:0016579 protein deubiquitination P
IDA
MmuMGI:2144157
IMP
DmeFBgn0013717
GO:0021782 glial cell development P
IMP
DmeFBgn0013717
GO:0043543 protein amino acid acylation P
RCA
SceS000004836
GO:0045449 regulation of transcription P
IMP
DmeFBgn0013717

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Curated yeast ortholog results:

S. pombe
systematic ID
S. cerevisiae
systematic ID
SPAC13A11.04c
(Q09738)
YMR223W
(S000004836)