Bahler Lab

Search term: YMR261C

Gene summary:

Species Saccharomyces cerevisiae (Sce)

Primary name TPS3

SGD link S000004874

Alternative ID YMR261C

Description Regulatory subunit of trehalose-6-phosphate synthase/phosphatase complex, which synthesizes the storage carbohydrate trehalose; expression is induced by stress conditions and repressed by the Ras-cAMP pathway

Synonyms YMR261C

Datasets
KOGs
Inparanoid
HomoloGene
OrthoMCL
Curated

Search for gene by ID or name:

Query species:

Include wild-cards: Yes No

Search for GO info: Yes No

GO info in one table: Yes No

KOG results:

KOG name Phylogenetic pattern
(and link to KOGs with this pattern)

KOG1050 ACD-YPE

KOGs classification KOGs description

METABOLISM Trehalose-6-phosphate synthase component TPS1 and related subunits

GO terms for KOG results:

GO ID GO term GO aspect Evidence codes and associations

GO:0005575 cellular_component C
ND
Ath At1g22210
At1g17000
At1g16980
At2g22190
At1g60140
At4g39770
Spo SPAC19G12.15c

GO:0005634 nucleus C
IDA
Spo SPAC3G6.09c

GO:0005737 cytoplasm C
IDA
Sce S000000330

GO:0005739 mitochondrion C
IDA
Ath At2g18700
Sce S000002481

GO:0005811 lipid particle C
IDA
Dme FBgn0027560

GO:0005829 cytosol C
IDA
Spo SPAC22F8.05
SPAC328.03
SPAC3G6.09c
SPACUNK4.16c

GO:0005946 alpha,alpha-trehalose-phosphate synthase complex
(UDP-forming) C
IDA
Sce S000000330
IGI
Sce S000002481
S000000330
S000004566
S000004874
IMP
Sce S000000330
S000002481
S000004566
S000004874
IPI
Sce S000002481
S000000330
S000004566
S000004874
ISS
Spo SPAC22F8.05
SPAC3G6.09c
SPACUNK4.16c

GO:0003825 alpha,alpha-trehalose-phosphate synthase
(UDP-forming) activity F
IDA
Sce S000000330
IGI
Ath At1g78580
At1g68020
IMP
Sce S000000330
S000004566
S000004874
ISS
Ath At4g27550
At1g16980
At1g17000
Dme FBgn0027560
Sce S000004874
Spo SPAC22F8.05
SPACUNK4.16c
NAS
Dme FBgn0027560
RCA
Sce S000002481
TAS
Spo SPAC328.03

GO:0004805 trehalose-phosphatase activity F
IDA
Ath At1g78090
At5g51460
IGI
Ath At1g68020
Sce S000004566
S000004874
IMP
Sce S000002481
Spo SPAC19G12.15c
ISS
Ath At4g12430
At1g22210
At5g51460
At2g22190
At4g22590
At1g60140
At1g06410
At1g23870
At4g17770
At1g35910
At1g68020
At4g39770
At5g10100
At5g65140
Dme FBgn0031908
Spo SPAC3G6.09c
RCA
Sce S000000330

GO:0005515 protein binding F
IPI
Ath At4g17770
Spo SPAC328.03
SPAC19G12.15c

GO:0008194 UDP-glycosyltransferase activity F
RCA
Sce S000002481

GO:0016757 transferase activity, transferring glycosyl
groups F
ISS
Ath At1g78580
At1g06410
At4g27550
At2g18700
At1g60140
At1g23870
At1g16980
At1g70290
At4g17770
At1g68020
RCA
Sce S000002481

GO:0016758 transferase activity, transferring hexosyl
groups F
RCA
Sce S000002481

GO:0019203 carbohydrate phosphatase activity F
RCA
Sce S000000330

GO:0030234 enzyme regulator activity F
IDA
Sce S000004566
IMP
Sce S000004874
ISS
Sce S000004874
RCA
Sce S000002481

GO:0035251 UDP-glucosyltransferase activity F
RCA
Sce S000002481

GO:0046527 glucosyltransferase activity F
RCA
Sce S000002481

GO:0005991 trehalose metabolic process P
IC
Spo SPAC328.03
IMP
Spo SPAC19G12.15c
TAS
Ath At1g78580

GO:0005992 trehalose biosynthetic process P
IDA
Ath At1g78090
At5g51460
Sce S000000330
IGI
Ath At1g68020
Sce S000004566
S000004874
IMP
Sce S000000330
S000004566
S000002481
S000004874
IPI
Sce S000004566
S000004874
ISS
Ath At1g22210
At4g12430
At1g06410
At4g27550
At1g23870
At1g16980
At2g22190
At1g17000
At4g17770
At1g35910
At1g60140
At1g68020
At4g22590
At4g39770
At5g10100
At5g51460
At5g65140
Spo SPAC22F8.05
SPACUNK4.16c
SPAC3G6.09c

GO:0006112 energy reserve metabolic process P
RCA
Sce S000000330

GO:0006950 response to stress P
IDA
Sce S000000330
S000002481
IGI
Sce S000000330
IMP
Sce S000000330
S000004566
S000002481
S000004874

GO:0007039 vacuolar protein catabolic process P
RCA
Sce S000002481
S000000330
S000004566
S000004874

GO:0007568 aging P
RCA
Sce S000000330

GO:0009266 response to temperature stimulus P
RCA
Sce S000002481
S000000330
S000004566

GO:0009415 response to water P
RCA
Sce S000004566

GO:0009790 embryo development P
IMP
Ath At1g78580

GO:0009793 embryo development ending in seed
dormancy P
IMP
Ath At1g78580

GO:0009832 plant-type cell wall biogenesis P
IMP
Ath At1g78580

GO:0010182 sugar mediated signaling pathway P
IMP
Ath At1g78580

GO:0030437 ascospore formation P
IMP
Spo SPAC328.03

GO:0031990 mRNA export from nucleus in response to heat
stress P
IMP
Spo SPAC328.03

GO:0033554 cellular response to stress P
IEP
Spo SPAC19G12.15c
SPAC22F8.05
SPACUNK4.16c
IMP
Spo SPAC328.03

GO:0044262 cellular carbohydrate metabolic
process P
IDA
Sce S000000330
IMP
Sce S000000330
RCA
Sce S000000330
S000002481
S000004566

GO:0046686 response to cadmium ion P
IEP
Ath At5g65140

GO:0051301 cell division P
IMP
Ath At1g78580

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HomoloGene results:

HomoloGene cluster Phylogenetic pattern

39835

Species Gene ID NCBI link UniProt link

Schizosaccharomyces pombe (Spo) SPACUNK4.16c GI:19114874 O14081

Saccharomyces cerevisiae (Sce) TSL1
(S000004566) GI:6323537 P38427

Saccharomyces cerevisiae (Sce) TPS3
(S000004874) GI:6323917 P38426

Kluyveromyces lactis (Kla) KLLA0E11231g GI:50308903

Eremothecium gossypii (Ego) AGOS_AER276C GI:45190879

Magnaporthe grisea (Mgr) MGG_14118 GI:145601221

Neurospora crassa (Ncr) NCU00793.1 GI:32408985

GO terms for Homologene results:

GO ID GO term GO aspect Evidence codes and associations

GO:0005829 cytosol C
IDA
Spo SPACUNK4.16c

GO:0005946 alpha,alpha-trehalose-phosphate synthase complex
(UDP-forming) C
IGI
Sce S000004566
S000004874
IMP
Sce S000004566
S000004874
IPI
Sce S000004566
S000004874
ISS
Spo SPACUNK4.16c

GO:0003825 alpha,alpha-trehalose-phosphate synthase
(UDP-forming) activity F
IMP
Sce S000004566
S000004874
ISS
Sce S000004874
Spo SPACUNK4.16c

GO:0004805 trehalose-phosphatase activity F
IGI
Sce S000004566
S000004874

GO:0030234 enzyme regulator activity F
IDA
Sce S000004566
IMP
Sce S000004874
ISS
Sce S000004874

GO:0005992 trehalose biosynthetic process P
IGI
Sce S000004566
S000004874
IMP
Sce S000004566
S000004874
IPI
Sce S000004566
S000004874
ISS
Spo SPACUNK4.16c

GO:0006950 response to stress P
IMP
Sce S000004566
S000004874

GO:0007039 vacuolar protein catabolic process P
RCA
Sce S000004566
S000004874

GO:0009266 response to temperature stimulus P
RCA
Sce S000004566

GO:0009415 response to water P
RCA
Sce S000004566

GO:0033554 cellular response to stress P
IEP
Spo SPACUNK4.16c

GO:0044262 cellular carbohydrate metabolic
process P
RCA
Sce S000004566

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OrthoMCL results:

Selected databases only

OrthoMCL cluster Phylogenetic pattern

OG1_10405

Species OrthoMCL
sequence Model organism
protein page UniProt link

Ashbya gossypii (Ago) ago2778 AER276C

Candida glabrata (Cgl) cgl2166 CAGL0H02387g

Candida glabrata (Cgl) cgl3272 CAGL0J06468g

Debaryomyces hansenii (Dha) dha4712 DEHA0F07392g

Kluyveromyces lactis (Kla) kla3456 KLLA0E11231g

Neurospora crassa (Ncr) ncr771 NCU00793.2

Saccharomyces cerevisiae (Sce) sce4707 YML100W
(S000004566)

Saccharomyces cerevisiae (Sce) sce5033 YMR261C
(S000004874)

Schizosaccharomyces pombe (Spo) spo4501 SPAC22F8.05 Q9UUI7

Schizosaccharomyces pombe (Spo) spo178 SPACUNK4.16c O14081

Yarrowia lipolytica (Yli) yli5146 YALI0E31086g

KOG name	Phylogenetic pattern (and link to KOGs with this pattern)
KOG1050	ACD-YPE

KOGs classification	KOGs description
METABOLISM	Trehalose-6-phosphate synthase component TPS1 and related subunits

Species	KOG link	NCBI link	UniProt link
Arabidopsis thaliana (Ath)	At1g06410	GI:15221478
Arabidopsis thaliana (Ath)	At1g16980	GI:15219969
Arabidopsis thaliana (Ath)	At1g17000	GI:15219985
Arabidopsis thaliana (Ath)	At1g22210	GI:15219843
Arabidopsis thaliana (Ath)	At1g23870	GI:15220891
Arabidopsis thaliana (Ath)	At1g35910	GI:12322095
Arabidopsis thaliana (Ath)	At1g60140	GI:15219002
Arabidopsis thaliana (Ath)	At1g68020	GI:12324075
Arabidopsis thaliana (Ath)	At1g70290	GI:15223111
Arabidopsis thaliana (Ath)	At1g78090	GI:15218205
Arabidopsis thaliana (Ath)	At1g78580	GI:15218422
Arabidopsis thaliana (Ath)	At2g18700	GI:15224213
Arabidopsis thaliana (Ath)	At2g22190	GI:15227161
Arabidopsis thaliana (Ath)	At4g12430	GI:15234552
Arabidopsis thaliana (Ath)	At4g17770	GI:7488400
Arabidopsis thaliana (Ath)	At4g22590	GI:15235713
Arabidopsis thaliana (Ath)	At4g27550	GI:15234194
Arabidopsis thaliana (Ath)	At4g39770	GI:15236018
Arabidopsis thaliana (Ath)	At5g10100	GI:15238060
Arabidopsis thaliana (Ath)	At5g51460	GI:15242090
Arabidopsis thaliana (Ath)	At5g65140	GI:15238360
Caenorhabditis elegans (Cel)	CE15870_1	GI:17531199
Caenorhabditis elegans (Cel)	CE26342_1	GI:17570639
Drosophila melanogaster (Dme)	7295715 (FBgn0027560)	GI:19920676
Drosophila melanogaster (Dme)	7297245	GI:20129307	Q9VM19
Drosophila melanogaster (Dme)	7297246 (FBgn0031908)	GI:20129309
Saccharomyces cerevisiae (Sce)	YBR126c (S000000330)	GI:6319602	Q00764
Saccharomyces cerevisiae (Sce)	YDR074w (S000002481)	GI:6320279	P31688
Saccharomyces cerevisiae (Sce)	YML100w (S000004566)	GI:6323537	P38427
Saccharomyces cerevisiae (Sce)	YMR261c (S000004874)	GI:6323917	P38426
Schizosaccharomyces pombe (Spo)	SPAC19G12.15c	GI:19115342	P78875
Schizosaccharomyces pombe (Spo)	SPAC22F8.05	GI:19115640	Q9UUI7
Schizosaccharomyces pombe (Spo)	SPAC328.03	GI:19115117	P40387
Schizosaccharomyces pombe (Spo)	SPAC3G6.09c	GI:19115887	O14145
Schizosaccharomyces pombe (Spo)	SPACUNK4.16c	GI:19114874	O14081
Encephalitozoon cuniculi (Ecu)	ECU01g0800	GI:19075090
Encephalitozoon cuniculi (Ecu)	ECU01g0870	GI:19075097
Arabidopsis thaliana (Ath)	At1g06410	GI:15221478
Arabidopsis thaliana (Ath)	At1g16980	GI:15219969
Arabidopsis thaliana (Ath)	At1g17000	GI:15219985
Arabidopsis thaliana (Ath)	At1g22210	GI:15219843
Arabidopsis thaliana (Ath)	At1g23870	GI:15220891
Arabidopsis thaliana (Ath)	At1g35910	GI:12322095
Arabidopsis thaliana (Ath)	At1g60140	GI:15219002
Arabidopsis thaliana (Ath)	At1g68020	GI:12324075
Arabidopsis thaliana (Ath)	At1g70290	GI:15223111
Arabidopsis thaliana (Ath)	At1g78090	GI:15218205
Arabidopsis thaliana (Ath)	At1g78580	GI:15218422
Arabidopsis thaliana (Ath)	At2g18700	GI:15224213
Arabidopsis thaliana (Ath)	At2g22190	GI:15227161
Arabidopsis thaliana (Ath)	At4g12430	GI:15234552
Arabidopsis thaliana (Ath)	At4g17770	GI:7488400
Arabidopsis thaliana (Ath)	At4g22590	GI:15235713
Arabidopsis thaliana (Ath)	At4g27550	GI:15234194
Arabidopsis thaliana (Ath)	At4g39770	GI:15236018
Arabidopsis thaliana (Ath)	At5g10100	GI:15238060
Arabidopsis thaliana (Ath)	At5g51460	GI:15242090
Arabidopsis thaliana (Ath)	At5g65140	GI:15238360
Caenorhabditis elegans (Cel)	CE15870_1	GI:17531199
Caenorhabditis elegans (Cel)	CE26342_1	GI:17570639
Drosophila melanogaster (Dme)	7295715 (FBgn0027560)	GI:19920676
Drosophila melanogaster (Dme)	7297245	GI:20129307	Q9VM19
Drosophila melanogaster (Dme)	7297246 (FBgn0031908)	GI:20129309
Saccharomyces cerevisiae (Sce)	YBR126c (S000000330)	GI:6319602	Q00764
Saccharomyces cerevisiae (Sce)	YDR074w (S000002481)	GI:6320279	P31688
Saccharomyces cerevisiae (Sce)	YML100w (S000004566)	GI:6323537	P38427
Saccharomyces cerevisiae (Sce)	YMR261c (S000004874)	GI:6323917	P38426
Schizosaccharomyces pombe (Spo)	SPAC19G12.15c	GI:19115342	P78875
Schizosaccharomyces pombe (Spo)	SPAC22F8.05	GI:19115640	Q9UUI7
Schizosaccharomyces pombe (Spo)	SPAC328.03	GI:19115117	P40387
Schizosaccharomyces pombe (Spo)	SPAC3G6.09c	GI:19115887	O14145
Schizosaccharomyces pombe (Spo)	SPACUNK4.16c	GI:19114874	O14081
Encephalitozoon cuniculi (Ecu)	ECU01g0800	GI:19075090
Encephalitozoon cuniculi (Ecu)	ECU01g0870	GI:19075097

Species	Gene ID	NCBI link	UniProt link
Schizosaccharomyces pombe (Spo)	SPACUNK4.16c	GI:19114874	O14081
Saccharomyces cerevisiae (Sce)	TSL1 (S000004566)	GI:6323537	P38427
Saccharomyces cerevisiae (Sce)	TPS3 (S000004874)	GI:6323917	P38426
Kluyveromyces lactis (Kla)	KLLA0E11231g	GI:50308903
Eremothecium gossypii (Ego)	AGOS_AER276C	GI:45190879
Magnaporthe grisea (Mgr)	MGG_14118	GI:145601221
Neurospora crassa (Ncr)	NCU00793.1	GI:32408985

Species	OrthoMCL sequence	Model organism protein page	UniProt link
Ashbya gossypii (Ago)	ago2778	AER276C
Candida glabrata (Cgl)	cgl2166	CAGL0H02387g
Candida glabrata (Cgl)	cgl3272	CAGL0J06468g
Debaryomyces hansenii (Dha)	dha4712	DEHA0F07392g
Kluyveromyces lactis (Kla)	kla3456	KLLA0E11231g
Neurospora crassa (Ncr)	ncr771	NCU00793.2
Saccharomyces cerevisiae (Sce)	sce4707	YML100W (S000004566)
Saccharomyces cerevisiae (Sce)	sce5033	YMR261C (S000004874)
Schizosaccharomyces pombe (Spo)	spo4501	SPAC22F8.05	Q9UUI7
Schizosaccharomyces pombe (Spo)	spo178	SPACUNK4.16c	O14081
Yarrowia lipolytica (Yli)	yli5146	YALI0E31086g