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Search term: YMR269W

Gene summary:

Species Saccharomyces cerevisiae (Sce)
Primary name TMA23
SGD link S000004882
Alternative ID YMR269W
Description Nucleolar protein of unknown function implicated in ribosome biogenesis; TMA23 may be a fungal-specific gene as no homologs have been yet identified in higher eukaryotes
Synonyms YMR269W
Datasets
KOGs
Inparanoid
HomoloGene
OrthoMCL
Curated

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HomoloGene results:

HomoloGene cluster Phylogenetic pattern
40003

Species Gene ID NCBI link UniProt link
Schizosaccharomyces pombe (Spo) SPAC1952.02 GI:63054658 Q9UUK4
Saccharomyces cerevisiae (Sce) TMA23
(S000004882)		 GI:44829555
Kluyveromyces lactis (Kla) KLLA0D01980g GI:50306365
Eremothecium gossypii (Ego) AGOS_AER286W GI:45190889


GO terms for Homologene results:

GO ID GO term GO aspect Evidence codes and associations
GO:0005730 nucleolus C
IDA
SceS000004882
SpoSPAC1952.02
ISS
SpoSPAC1952.02
GO:0005840 ribosome C
IDA
SceS000004882
GO:0003674 molecular_function F
ND
SceS000004882
GO:0003723 RNA binding F
ISS
SpoSPAC1952.02
GO:0006364 rRNA processing P
RCA
SceS000004882
GO:0016072 rRNA metabolic process P
RCA
SceS000004882
GO:0042254 ribosome biogenesis P
ISS
SpoSPAC1952.02
GO:0042274 ribosomal small subunit biogenesis P
IGI
SceS000004882

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OrthoMCL results:

Selected databases only

OrthoMCL cluster Phylogenetic pattern
OG1_11636

Species OrthoMCL
sequence		 Model organism
protein page		 UniProt link
Ashbya gossypii (Ago) ago2788 AER286W
Candida glabrata (Cgl) cgl2157 CAGL0H02189g
Cryptococcus neoformans (Cne) cne2711 183.m01645
Debaryomyces hansenii (Dha) dha4748 DEHA0F08272g
Homo sapiens (Hsa) hsa2289 ENSP00000334793
(GPATCH4)		 B4DVU2
Kluyveromyces lactis (Kla) kla2155 KLLA0D01980g
Neurospora crassa (Ncr) ncr2048 NCU02106.2
Saccharomyces cerevisiae (Sce) sce5041 YMR269W
(S000004882)
Schizosaccharomyces pombe (Spo) spo4540 SPAC1952.02 Q9UUK4
Yarrowia lipolytica (Yli) yli5416 YALI0F01991g


GO terms for OrthoMCL results:

GO ID GO term GO aspect Evidence codes and associations
GO:0005730 nucleolus C
IDA
SceS000004882
SpoSPAC1952.02
ISS
SpoSPAC1952.02
GO:0005840 ribosome C
IDA
SceS000004882
GO:0003674 molecular_function F
ND
SceS000004882
GO:0003723 RNA binding F
ISS
SpoSPAC1952.02
GO:0006364 rRNA processing P
RCA
SceS000004882
GO:0016072 rRNA metabolic process P
RCA
SceS000004882
GO:0042254 ribosome biogenesis P
ISS
SpoSPAC1952.02
GO:0042274 ribosomal small subunit biogenesis P
IGI
SceS000004882

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Curated yeast ortholog results:

S. pombe
systematic ID		 S. cerevisiae
systematic ID
SPAC1952.02
(Q9UUK4)		 YMR269W
(S000004882)


GO terms for curated homolog results:

GO ID GO term GO aspect Evidence codes and associations
GO:0005730 nucleolus C
IDA
SceS000004882
SpoSPAC1952.02
ISS
SpoSPAC1952.02
GO:0005840 ribosome C
IDA
SceS000004882
GO:0003674 molecular_function F
ND
SceS000004882
GO:0003723 RNA binding F
ISS
SpoSPAC1952.02
GO:0006364 rRNA processing P
RCA
SceS000004882
GO:0016072 rRNA metabolic process P
RCA
SceS000004882
GO:0042254 ribosome biogenesis P
ISS
SpoSPAC1952.02
GO:0042274 ribosomal small subunit biogenesis P
IGI
SceS000004882

Back to the top
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