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Search term: YMR270C


Gene summary:

Species Saccharomyces cerevisiae (Sce)
Primary name RRN9
SGD link S000004883
Alternative ID YMR270C
Description Protein involved in promoting high level transcription of rDNA, subunit of UAF (upstream activation factor) for RNA polymerase I
Synonyms YMR270C
Datasets
KOGs
Inparanoid
HomoloGene
OrthoMCL
Curated

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HomoloGene results:

HomoloGene cluster Phylogenetic pattern
40004

Species Gene ID NCBI link UniProt link
Saccharomyces cerevisiae (Sce) RRN9
(S000004883)
GI:6323926
Kluyveromyces lactis (Kla) KLLA0D01947g GI:50306361
Eremothecium gossypii (Ego) AGOS_AER288C GI:45190891


GO terms for Homologene results:

GO ID GO term GO aspect Evidence codes and associations
GO:0000500 RNA polymerase I upstream activating factor
complex
C
TAS
SceS000004883
GO:0000182 rDNA binding F
TAS
SceS000004883
GO:0003701 RNA polymerase I transcription factor
activity
F
TAS
SceS000004883
GO:0006360 transcription from RNA polymerase I
promoter
P
TAS
SceS000004883
GO:0006364 rRNA processing P
RCA
SceS000004883
GO:0042790 transcription of nuclear rRNA large RNA polymerase
I transcript
P
IGI
SceS000004883

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OrthoMCL results:

Selected databases only

OrthoMCL cluster Phylogenetic pattern
OG1_31596

Species OrthoMCL
sequence
Model organism
protein page
UniProt link
Ashbya gossypii (Ago) ago2790 AER288C
Candida glabrata (Cgl) cgl1373 CAGL0F03333g
Kluyveromyces lactis (Kla) kla2153 KLLA0D01947g
Saccharomyces cerevisiae (Sce) sce5042 YMR270C
(S000004883)


GO terms for OrthoMCL results:

GO ID GO term GO aspect Evidence codes and associations
GO:0000500 RNA polymerase I upstream activating factor
complex
C
TAS
SceS000004883
GO:0000182 rDNA binding F
TAS
SceS000004883
GO:0003701 RNA polymerase I transcription factor
activity
F
TAS
SceS000004883
GO:0006360 transcription from RNA polymerase I
promoter
P
TAS
SceS000004883
GO:0006364 rRNA processing P
RCA
SceS000004883
GO:0042790 transcription of nuclear rRNA large RNA polymerase
I transcript
P
IGI
SceS000004883

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Curated yeast ortholog results:

S. pombe
systematic ID
S. cerevisiae
systematic ID
SPBC17D1.04
(Q10204)
YMR270C
(S000004883)


GO terms for curated homolog results:

GO ID GO term GO aspect Evidence codes and associations
GO:0000500 RNA polymerase I upstream activating factor
complex
C
IDA
SpoSPBC17D1.04
TAS
SceS000004883
GO:0005730 nucleolus C
IDA
SpoSPBC17D1.04
GO:0005816 spindle pole body C
IDA
SpoSPBC17D1.04
GO:0005829 cytosol C
IDA
SpoSPBC17D1.04
GO:0000182 rDNA binding F
TAS
SceS000004883
GO:0003674 molecular_function F
ND
SpoSPBC17D1.04
GO:0003701 RNA polymerase I transcription factor
activity
F
TAS
SceS000004883
GO:0006360 transcription from RNA polymerase I
promoter
P
ISS
SpoSPBC17D1.04
TAS
SceS000004883
GO:0006364 rRNA processing P
RCA
SceS000004883
GO:0034503 protein localization to nucleolar rDNA
repeats
P
IMP
SpoSPBC17D1.04
GO:0034613 cellular protein localization P
IGI
SpoSPBC17D1.04
GO:0042790 transcription of nuclear rRNA large RNA polymerase
I transcript
P
IGI
SceS000004883

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